DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000547 | rno-miR-322* | 171099 | Rasd2 | acaacgucgcgaAGUACAAa | ||||||| | cagggauuuggaUCAUGUUa | 2 | 9 | 1522 | 1541 | [rn4:19:14103699-14103718:+] | 0.5824 | 140 | 7 | -8.87 | -0.3583 |
MIMAT0004655 | rno-miR-345-3p | 171099 | Rasd2 | agAGGUCUGGGGAUCAAGUCCc | |:| |:: |||||||||| | ccUUCCGGUAACUAGUUCAGGa | 2 | 21 | 850 | 871 | [rn4:19:14103027-14103048:+] | 0.5435 | 164 | 7 | -26.65 | -0.6328 |
MIMAT0004655 | rno-miR-345-3p | 171099 | Rasd2 | agaggucuGGGGAU--CAAGUCCc | |:|||| ||||||| | ugggacuuCUCCUAGCGUUCAGGc | 2 | 15 | 1109 | 1132 | [rn4:19:14103286-14103309:+] | 0.5435 | 153 | 7 | -19.42 | -0.1475 |
MIMAT0000598 | rno-miR-347 | 171099 | Rasd2 | accCGCUGGGUCUCCCUGu | |:|: : ||||||| | ggaGUGGGGUUGAGGGACg | 2 | 17 | 1148 | 1166 | [rn4:19:14103325-14103343:+] | 0.5435 | 144 | 7 | -22.46 | -0.1466 |
MIMAT0004710 | rno-miR-17-3p | 171099 | Rasd2 | gguguucacggaaGUGACGUCa | :||||||| | uucgucuccauagUACUGCAGc | 2 | 10 | 1222 | 1243 | [rn4:19:14103399-14103420:+] | 0.5206 | 141 | 7 | -17.91 | -0.2080 |
MIMAT0004717 | rno-miR-29b-2* | 171099 | Rasd2 | gauUCGGUGGUACACUUUGGUc | :|| :::|| ||||||| | gcuGGCGGUUAUCAGAAACCAu | 2 | 20 | 1387 | 1408 | [rn4:19:14103564-14103585:+] | 0.5824 | 155 | 7 | -16.35 | -0.2595 |
MIMAT0004719 | rno-miR-30c-1* | 171099 | Rasd2 | ccucaUUUGUUGGGAGAGGGUc | |:|||| ||||||| | cgccaAGACAA---UCUCCCAg | 2 | 18 | 200 | 218 | [rn4:19:14102377-14102395:+] | 0.5435 | 149 | 7 | -20.00 | -0.1006 |
MIMAT0005442 | rno-miR-30c-2* | 171099 | Rasd2 | ucucauUUGUCGGAAGAGGGUc | || | | ||||||| | cacgccAAGA-CAAUCUCCCAg | 2 | 17 | 198 | 218 | [rn4:19:14102375-14102395:+] | 0.5435 | 142 | 7 | -18.46 | -0.1099 |
MIMAT0004732 | rno-miR-135a* | 171099 | Rasd2 | aaaGUACCGAAGGUAGGGAUGu | || ||:| ||||||| | ugaCAGGGUU----UCCCUACu | 2 | 20 | 663 | 680 | [rn4:19:14102840-14102857:+] | 0.5435 | 142 | 7 | -16.31 | -0.3681 |
MIMAT0004735 | rno-miR-139-3p | 171099 | Rasd2 | gagGUUGUCCCG-GCGCAGAGGu | || : | || : ||||||| | auaCAUUUGUGCUUUCGUCUCCa | 2 | 20 | 1209 | 1231 | [rn4:19:14103386-14103408:+] | 0.5435 | 146 | 7 | -18.44 | -0.9739 |
MIMAT0004739 | rno-miR-204* | 171099 | Rasd2 | uuGCAGGGAAACGG---AAGGGUCg | :| |:||| ||: ||||||| | acUGCCUCUUGGCUACAUUCCCAGg | 2 | 21 | 538 | 562 | [rn4:19:14102715-14102739:+] | 0.5435 | 155 | 7 | -19.69 | -0.1076 |
MIMAT0004740 | rno-miR-218* | 171099 | Rasd2 | gcGCCACGAACUGUC-UUGGUAc | :|| | || ||| |||||| | gcUGGCGGUUAUCAGAAACCAUa | 2 | 21 | 1387 | 1409 | [rn4:19:14103564-14103586:+] | 0.5824 | 128 | 6 | -18.23 | -0.1558 |
MIMAT0000900 | rno-miR-298 | 171099 | Rasd2 | cccuucuuGUCGGGA---GGAGACGg | || ||:| ||||||| | uugcuagcCAUCCUUUGACCUCUGCa | 2 | 16 | 1341 | 1366 | [rn4:19:14103518-14103543:+] | 0.4976 | 146 | 7 | -19.31 | -0.3196 |
MIMAT0003197 | rno-miR-376a* | 171099 | Rasd2 | gaguaucuuccUCUUAGAUGg | :|||||||| | cagaaaccauaGGAAUCUACc | 2 | 11 | 1399 | 1419 | [rn4:19:14103576-14103596:+] | 0.5824 | 146 | 7 | -17.98 | -0.1114 |
MIMAT0003209 | rno-miR-363* | 171099 | Rasd2 | uuuaACGUAGCACUAGG-UGGGc | |||| | |:||| |||| | gcugUGCAGCUGGGUCCUACCCa | 2 | 19 | 727 | 749 | [rn4:19:14102904-14102926:+] | 0.5435 | 126 | 0 | -19.99 | -0.1174 |
MIMAT0003212 | rno-miR-20b-3p | 171099 | Rasd2 | ggucuucacgAGUGUGACGUCa | | ::||||||| | uucgucuccaUAGUACUGCAGc | 2 | 13 | 1222 | 1243 | [rn4:19:14103399-14103420:+] | 0.5206 | 144 | 7 | -14.57 | -0.2080 |
MIMAT0003378 | rno-miR-378* | 171099 | Rasd2 | uguGUCCUGGACCUCA-GUCCUc | ||| :|| |||| ||||| | agcCAGAGCC--GAGUCCAGGAc | 2 | 20 | 1066 | 1086 | [rn4:19:14103243-14103263:+] | 0.5435 | 124 | 0 | -18.45 | -0.1148 |
MIMAT0005279 | rno-miR-466c | 171099 | Rasd2 | guACAUGUACGUGUGUA-GUGu | || || | ::||||| ||| | uuUG-ACCUCUGCACAUGCACa | 2 | 20 | 1354 | 1374 | [rn4:19:14103531-14103551:+] | 0.4976 | 121 | 0 | -13.94 | -0.2029 |
MIMAT0005280 | rno-miR-743b | 171099 | Rasd2 | agauaaGUCAUACCACAGAAAg | || |: ||||||| | agagccCAAUGCCUUGUCUUUg | 2 | 17 | 643 | 664 | [rn4:19:14102820-14102841:+] | 0.5435 | 144 | 7 | -7.10 | -0.1577 |
MIMAT0005319 | rno-miR-484 | 171099 | Rasd2 | uagcccuccCCUGACUCG-GACu | |||| |||| ||| | acuaguucaGGACAGAGCUCUGa | 2 | 14 | 860 | 882 | [rn4:19:14103037-14103059:+] | 0.5435 | 121 | 0 | -18.46 | -0.1416 |
MIMAT0005323 | rno-miR-532-3p | 171099 | Rasd2 | acguucGGAACCCACACCCUCc | |||| |||||||| | gcgguuCCUU---UGUGGGAGg | 2 | 17 | 148 | 166 | [rn4:19:14102325-14102343:+] | 0.5232 | 148 | 7 | -25.58 | -0.2360 |
MIMAT0012822 | rno-miR-202 | 171099 | Rasd2 | uuucuucauauacGUAUCCUu | ||||||| | gguuaucagaaacCAUAGGAa | 2 | 9 | 1393 | 1413 | [rn4:19:14103570-14103590:+] | 0.5824 | 140 | 7 | -10.83 | -0.4879 |
MIMAT0012823 | rno-miR-490 | 171099 | Rasd2 | guCGU--ACCUCAGGA--GGUC-CAAc | ||| ||| ||||| |||| ||| | guGCAGCUGG-GUCCUACCCAGUGUUc | 2 | 21 | 730 | 755 | [rn4:19:14102907-14102932:+] | 0.5435 | 124 | 0 | -27.21 | -0.1741 |
MIMAT0012836 | rno-miR-628 | 171099 | Rasd2 | ggAGAGCAUUUAUACAGUCGUa | ||| | :::|||||||||| | ugUCU-GGGGGUAUGUCAGCAc | 2 | 21 | 176 | 196 | [rn4:19:14102353-14102373:+] | 0.5435 | 166 | 7 | -21.73 | -0.2079 |
MIMAT0012837 | rno-miR-632 | 171099 | Rasd2 | aggccGUCCUUUGUCUGUg | || ||:||||||| | agaaaCA-GAGACAGACAg | 2 | 15 | 486 | 503 | [rn4:19:14102663-14102680:+] | 0.5435 | 152 | 7 | -16.81 | -0.1568 |
MIMAT0012857 | rno-miR-678 | 171099 | Rasd2 | ggaGGUCAGGAACGGGGCUCUg | |||| |: |||||||| | accCCAGCCUCAACCCCGAGAg | 2 | 20 | 1691 | 1712 | [rn4:19:14103868-14103889:+] | 0.5824 | 159 | 7 | -32.20 | -0.1883 |
MIMAT0000560 | rno-miR-326 | 171099 | Rasd2 | ugaccuccuucccGGGUCUCc | ||||||| | uacacaccccuccCCCAGAGc | 2 | 9 | 1540 | 1560 | [rn4:19:14103717-14103737:+] | 0.5824 | 140 | 7 | -12.83 | -0.1046 |
MIMAT0004641 | rno-miR-330 | 171099 | Rasd2 | cggauucuguguccGGGUCUCu | ||||||| | uuacacaccccuccCCCAGAGc | 2 | 9 | 1539 | 1560 | [rn4:19:14103716-14103737:+] | 0.5824 | 140 | 7 | -16.53 | -0.1005 |
MIMAT0000583 | rno-miR-339-5p | 171099 | Rasd2 | gcacucGAGGACCUCCUGUCCCu | ||: | ||||||| | caaugcCUUGUCUUUGACAGGGu | 2 | 18 | 649 | 671 | [rn4:19:14102826-14102848:+] | 0.5435 | 141 | 7 | -18.34 | -0.3179 |
MIMAT0000602 | rno-miR-20a | 171099 | Rasd2 | gauGGACGUGAUAUUCGU-GAAAu | :||| |||: | ||| |||| | agcUCUG-ACUGGAUGCAGCUUUc | 2 | 21 | 875 | 897 | [rn4:19:14103052-14103074:+] | 0.5435 | 126 | 0 | -13.94 | -0.1649 |
MIMAT0000615 | rno-miR-101b | 171099 | Rasd2 | aagucgaUAGUGUCAUGACAu | :|| : ||||||| | acaugaaGUCCUUGUACUGUa | 2 | 15 | 622 | 642 | [rn4:19:14102799-14102819:+] | 0.5435 | 146 | 7 | -14.66 | -0.5718 |
MIMAT0000781 | rno-miR-9 | 171099 | Rasd2 | aguAUG-UCGAUCUAUUGGUUUCu | ||: | | || |||||||| | gacUAUGACCCUGAAAACCAAAGg | 2 | 21 | 1166 | 1189 | [rn4:19:14103343-14103366:+] | 0.5435 | 155 | 7 | -16.04 | -0.1660 |
MIMAT0000786 | rno-miR-17-5p | 171099 | Rasd2 | gauGGACGUGACAUUCGU-GAAAc | :||| |||| | ||| |||| | agcUCUG-ACUGGAUGCAGCUUUc | 2 | 21 | 875 | 897 | [rn4:19:14103052-14103074:+] | 0.5435 | 130 | 0 | -15.36 | -0.1633 |
MIMAT0000801 | rno-miR-29b | 171099 | Rasd2 | uuGUGACUAAAGU--UUACC-ACGAu | |||||| | | :||| |||| | auCACUGAGGUAAUCUGUGGAUGCUg | 2 | 22 | 1562 | 1587 | [rn4:19:14103739-14103764:+] | 0.5824 | 120 | 0 | -20.20 | -0.3094 |
MIMAT0000810 | rno-miR-31 | 171099 | Rasd2 | gucgaUACGGUCGUAGAA-CGGa | ||| | |||||| ||| | acaggAUGAGAACAUCUUAGCCa | 2 | 18 | 291 | 313 | [rn4:19:14102468-14102490:+] | 0.5435 | 125 | 0 | -18.20 | -0.3331 |
MIMAT0000814 | rno-miR-34c | 171099 | Rasd2 | cgUUAGUCGAUUGAU----GUGACGGa | |: ::|||:| | ||||||| | ggAGGUGGCUGAGGAUUCCCACUGCCc | 2 | 22 | 43 | 69 | [rn4:19:14102220-14102246:+] | 0.7349 | 144 | 7 | -18.33 | -0.1189 |
MIMAT0000814 | rno-miR-34c | 171099 | Rasd2 | cguuagucGAUUGAUGUGACGGa | || | ||||||| | cuguguccCUCAGACCACUGCCu | 2 | 16 | 522 | 544 | [rn4:19:14102699-14102721:+] | 0.5435 | 143 | 7 | -18.18 | -0.1305 |
MIMAT0000815 | rno-miR-34a | 171099 | Rasd2 | uguuggucGAUUCU-GUGACGGu | || ||| ||||||| | cuguguccCUCAGACCACUGCCu | 2 | 15 | 522 | 544 | [rn4:19:14102699-14102721:+] | 0.5435 | 153 | 7 | -17.70 | -0.1318 |
MIMAT0000815 | rno-miR-34a | 171099 | Rasd2 | ugUUGGUCGAUUCU-----GUGACGGu | |: ::|||:||: ||||||| | ggAGGUGGCUGAGGAUUCCCACUGCCc | 2 | 21 | 43 | 69 | [rn4:19:14102220-14102246:+] | 0.7349 | 147 | 7 | -21.99 | -0.1189 |
MIMAT0000815 | rno-miR-34a | 171099 | Rasd2 | uguuggucgaUUCUGUG-ACGGu | :|||||| |||| | cagagauggaGAGACACGUGCCu | 2 | 13 | 501 | 523 | [rn4:19:14102678-14102700:+] | 0.5435 | 120 | 0 | -16.98 | -0.1125 |
MIMAT0000823 | rno-miR-101a | 171099 | Rasd2 | aagucaaUAGUGUCAUGACAu | :|| : ||||||| | acaugaaGUCCUUGUACUGUa | 2 | 15 | 622 | 642 | [rn4:19:14102799-14102819:+] | 0.5435 | 146 | 7 | -13.70 | -0.5718 |
MIMAT0000825 | rno-miR-106b | 171099 | Rasd2 | uaGACGUGACAGUCGU-GAAAu | ||| |||| ||| |||| | cuCUG-ACUGGAUGCAGCUUUc | 2 | 20 | 877 | 897 | [rn4:19:14103054-14103074:+] | 0.5435 | 121 | 0 | -15.40 | -0.1633 |
MIMAT0000828 | rno-miR-124 | 171099 | Rasd2 | ccguaaguggCG-CACGGAAu | || ||||||| | gggggcuuggGCAGUGCCUUa | 2 | 11 | 20 | 40 | [rn4:19:14102197-14102217:+] | 0.7349 | 141 | 7 | -18.37 | -0.3822 |
MIMAT0004729 | rno-miR-125a-3p | 171099 | Rasd2 | ccGAGGGUUCUUGGAGU-GGACa | || ||||| ::||| |||| | ugCUGCCAAG-CUUUCAGCCUGa | 2 | 21 | 1279 | 1300 | [rn4:19:14103456-14103477:+] | 0.4976 | 126 | 0 | -23.53 | -0.2248 |
MIMAT0000862 | rno-miR-185 | 171099 | Rasd2 | aguccUUGACG-GAAAG-AGAGGu | | :||: ||||| ||||| | aauacAUUUGUGCUUUCGUCUCCa | 2 | 18 | 1208 | 1231 | [rn4:19:14103385-14103408:+] | 0.5435 | 124 | 0 | -18.88 | -0.8366 |
MIMAT0000869 | rno-miR-194 | 171099 | Rasd2 | agGUGUACCUCAACGACA-AUGu | ::|:|||| | |||| ||| | auUGCGUGGACCU-CUGUGUACa | 2 | 21 | 1769 | 1790 | [rn4:19:14103946-14103967:+] | 0.5824 | 122 | 0 | -16.66 | -0.4043 |
MIMAT0000879 | rno-miR-206 | 171099 | Rasd2 | gguguGUGAAGGAAUGUAAGGu | | ||| |||||||| | acugcCUCUUGGCUACAUUCCc | 2 | 18 | 538 | 559 | [rn4:19:14102715-14102736:+] | 0.5435 | 153 | 7 | -14.67 | -0.1564 |
MIMAT0000881 | rno-miR-210 | 171099 | Rasd2 | aguCGGCGACAGUGUGCGUGUc | ||: :| |:| ||||||| | aauGCUCUUCUUA-ACGCACAc | 2 | 20 | 1591 | 1611 | [rn4:19:14103768-14103788:+] | 0.5824 | 153 | 7 | -16.34 | -0.2431 |
MIMAT0000888 | rno-miR-218 | 171099 | Rasd2 | ugUACCAAUCUAGUUC-GUGUu | ||| | || |||| |||| | agAUGCUCAGUACAAGUCACAg | 2 | 20 | 273 | 294 | [rn4:19:14102450-14102471:+] | 0.5435 | 127 | 0 | -11.94 | -0.2499 |
MIMAT0000903 | rno-miR-320 | 171099 | Rasd2 | agCGGGA--GAGUUGGGUCGAAAa | ||:|| || :|: ||||||| | gaGCUCUGACUGGAUGCAGCUUUc | 2 | 21 | 874 | 897 | [rn4:19:14103051-14103074:+] | 0.5435 | 159 | 7 | -19.76 | -0.1080 |
MIMAT0000903 | rno-miR-320 | 171099 | Rasd2 | agcGGGA-GAG-UUGGGU--CGAAAa | |||| ||| ||:||| ||||| | uuuCCCUACUCAAAUCCAUUGCUUUa | 2 | 20 | 671 | 696 | [rn4:19:14102848-14102873:+] | 0.5435 | 121 | 0 | -22.00 | -0.1341 |
MIMAT0001543 | rno-miR-449a | 171099 | Rasd2 | ugGUCGAUUGUUA--UGUGACGGu | ::|||:| :|| ||||||| | ggUGGCUGAGGAUUCCCACUGCCc | 2 | 21 | 46 | 69 | [rn4:19:14102223-14102246:+] | 0.7349 | 155 | 7 | -20.10 | -0.1201 |
MIMAT0001543 | rno-miR-449a | 171099 | Rasd2 | uggucgauuGUUAUGUGACGGu | ||: ||||||| | ugugucccuCAGACCACUGCCu | 2 | 14 | 523 | 544 | [rn4:19:14102700-14102721:+] | 0.5435 | 145 | 7 | -14.45 | -0.1293 |
MIMAT0001543 | rno-miR-449a | 171099 | Rasd2 | uggUCGAUUGUUAUGUG-ACGGu | || |:: :| |||| |||| | cagAGAUGGAGAGACACGUGCCu | 2 | 20 | 501 | 523 | [rn4:19:14102678-14102700:+] | 0.5435 | 123 | 0 | -15.18 | -0.1148 |
MIMAT0003125 | rno-miR-1 | 171099 | Rasd2 | uauGUG-UGAAGAA---AUGUAAGGu | ||| :| |||| |||||||| | gacCACUGCCUCUUGGCUACAUUCCc | 2 | 20 | 534 | 559 | [rn4:19:14102711-14102736:+] | 0.5435 | 157 | 7 | -17.03 | -0.1564 |
MIMAT0003176 | rno-miR-539 | 171099 | Rasd2 | uguguGGUUCCUAUUAAAGAGg | ||| | ||||||| | ccuguCCAUAUAACAUUUCUCg | 2 | 18 | 563 | 584 | [rn4:19:14102740-14102761:+] | 0.5435 | 145 | 7 | -9.96 | -0.3825 |
MIMAT0003203 | rno-miR-485 | 171099 | Rasd2 | cuuAAGU-AGUGCCGGUCGGAGa | | || | || |||||||| | uccUGCAGUGAC-CCCAGCCUCa | 2 | 20 | 1681 | 1702 | [rn4:19:14103858-14103879:+] | 0.5824 | 148 | 7 | -17.10 | -0.1422 |
MIMAT0003379 | rno-miR-378 | 171099 | Rasd2 | ggAAGACUGAGGUUCAG-GUCa | | || | | |||||| ||| | gaUGCUCAGUACAAGUCACAGg | 2 | 20 | 274 | 295 | [rn4:19:14102451-14102472:+] | 0.5435 | 127 | 0 | -14.13 | -0.4683 |
MIMAT0005320 | rno-miR-495 | 171099 | Rasd2 | uucUUCACGUGGUACAAACAAa | || | | : ||||||| | aucAAUUAAAGUUGGUUUGUUa | 2 | 20 | 1793 | 1814 | [rn4:19:14103970-14103991:+] | 0.5824 | 143 | 7 | -6.37 | -0.4192 |
MIMAT0005320 | rno-miR-495 | 171099 | Rasd2 | uuCUUCACGU--GGUACAA-ACAAa | ||||||:: :| |||| |||| | uuGAAGUGUGUUUCCUGUUCUGUUu | 2 | 21 | 590 | 614 | [rn4:19:14102767-14102791:+] | 0.5435 | 131 | 0 | -16.75 | -0.1221 |