Rasd2
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000547rno-miR-322*171099Rasd2acaacgucgcgaAGUACAAa ||||||| cagggauuuggaUCAUGUUa2915221541[rn4:19:14103699-14103718:+]0.58241407-8.87-0.3583
MIMAT0004655rno-miR-345-3p171099Rasd2agAGGUCUGGGGAUCAAGUCCc |:| |:: |||||||||| ccUUCCGGUAACUAGUUCAGGa221850871[rn4:19:14103027-14103048:+]0.54351647-26.65-0.6328
MIMAT0004655rno-miR-345-3p171099Rasd2agaggucuGGGGAU--CAAGUCCc |:|||| ||||||| ugggacuuCUCCUAGCGUUCAGGc21511091132[rn4:19:14103286-14103309:+]0.54351537-19.42-0.1475
MIMAT0000598rno-miR-347171099Rasd2accCGCUGGGUCUCCCUGu |:|: : ||||||| ggaGUGGGGUUGAGGGACg21711481166[rn4:19:14103325-14103343:+]0.54351447-22.46-0.1466
MIMAT0004710rno-miR-17-3p171099Rasd2gguguucacggaaGUGACGUCa :||||||| uucgucuccauagUACUGCAGc21012221243[rn4:19:14103399-14103420:+]0.52061417-17.91-0.2080
MIMAT0004717rno-miR-29b-2*171099Rasd2gauUCGGUGGUACACUUUGGUc :|| :::|| ||||||| gcuGGCGGUUAUCAGAAACCAu22013871408[rn4:19:14103564-14103585:+]0.58241557-16.35-0.2595
MIMAT0004719rno-miR-30c-1*171099Rasd2ccucaUUUGUUGGGAGAGGGUc |:|||| ||||||| cgccaAGACAA---UCUCCCAg218200218[rn4:19:14102377-14102395:+]0.54351497-20.00-0.1006
MIMAT0005442rno-miR-30c-2*171099Rasd2ucucauUUGUCGGAAGAGGGUc || | | ||||||| cacgccAAGA-CAAUCUCCCAg217198218[rn4:19:14102375-14102395:+]0.54351427-18.46-0.1099
MIMAT0004732rno-miR-135a*171099Rasd2aaaGUACCGAAGGUAGGGAUGu || ||:| ||||||| ugaCAGGGUU----UCCCUACu220663680[rn4:19:14102840-14102857:+]0.54351427-16.31-0.3681
MIMAT0004735rno-miR-139-3p171099Rasd2gagGUUGUCCCG-GCGCAGAGGu || : | || : ||||||| auaCAUUUGUGCUUUCGUCUCCa22012091231[rn4:19:14103386-14103408:+]0.54351467-18.44-0.9739
MIMAT0004739rno-miR-204*171099Rasd2uuGCAGGGAAACGG---AAGGGUCg :| |:||| ||: ||||||| acUGCCUCUUGGCUACAUUCCCAGg221538562[rn4:19:14102715-14102739:+]0.54351557-19.69-0.1076
MIMAT0004740rno-miR-218*171099Rasd2gcGCCACGAACUGUC-UUGGUAc :|| | || ||| |||||| gcUGGCGGUUAUCAGAAACCAUa22113871409[rn4:19:14103564-14103586:+]0.58241286-18.23-0.1558
MIMAT0000900rno-miR-298171099Rasd2cccuucuuGUCGGGA---GGAGACGg || ||:| ||||||| uugcuagcCAUCCUUUGACCUCUGCa21613411366[rn4:19:14103518-14103543:+]0.49761467-19.31-0.3196
MIMAT0003197rno-miR-376a*171099Rasd2gaguaucuuccUCUUAGAUGg :|||||||| cagaaaccauaGGAAUCUACc21113991419[rn4:19:14103576-14103596:+]0.58241467-17.98-0.1114
MIMAT0003209rno-miR-363*171099Rasd2uuuaACGUAGCACUAGG-UGGGc |||| | |:||| |||| gcugUGCAGCUGGGUCCUACCCa219727749[rn4:19:14102904-14102926:+]0.54351260-19.99-0.1174
MIMAT0003212rno-miR-20b-3p171099Rasd2ggucuucacgAGUGUGACGUCa | ::||||||| uucgucuccaUAGUACUGCAGc21312221243[rn4:19:14103399-14103420:+]0.52061447-14.57-0.2080
MIMAT0003378rno-miR-378*171099Rasd2uguGUCCUGGACCUCA-GUCCUc ||| :|| |||| ||||| agcCAGAGCC--GAGUCCAGGAc22010661086[rn4:19:14103243-14103263:+]0.54351240-18.45-0.1148
MIMAT0005279rno-miR-466c171099Rasd2guACAUGUACGUGUGUA-GUGu || || | ::||||| ||| uuUG-ACCUCUGCACAUGCACa22013541374[rn4:19:14103531-14103551:+]0.49761210-13.94-0.2029
MIMAT0005280rno-miR-743b171099Rasd2agauaaGUCAUACCACAGAAAg || |: ||||||| agagccCAAUGCCUUGUCUUUg217643664[rn4:19:14102820-14102841:+]0.54351447-7.10-0.1577
MIMAT0005319rno-miR-484171099Rasd2uagcccuccCCUGACUCG-GACu |||| |||| ||| acuaguucaGGACAGAGCUCUGa214860882[rn4:19:14103037-14103059:+]0.54351210-18.46-0.1416
MIMAT0005323rno-miR-532-3p171099Rasd2acguucGGAACCCACACCCUCc |||| |||||||| gcgguuCCUU---UGUGGGAGg217148166[rn4:19:14102325-14102343:+]0.52321487-25.58-0.2360
MIMAT0012822rno-miR-202171099Rasd2uuucuucauauacGUAUCCUu ||||||| gguuaucagaaacCAUAGGAa2913931413[rn4:19:14103570-14103590:+]0.58241407-10.83-0.4879
MIMAT0012823rno-miR-490171099Rasd2guCGU--ACCUCAGGA--GGUC-CAAc ||| ||| ||||| |||| ||| guGCAGCUGG-GUCCUACCCAGUGUUc221730755[rn4:19:14102907-14102932:+]0.54351240-27.21-0.1741
MIMAT0012836rno-miR-628171099Rasd2ggAGAGCAUUUAUACAGUCGUa ||| | :::|||||||||| ugUCU-GGGGGUAUGUCAGCAc221176196[rn4:19:14102353-14102373:+]0.54351667-21.73-0.2079
MIMAT0012837rno-miR-632171099Rasd2aggccGUCCUUUGUCUGUg || ||:||||||| agaaaCA-GAGACAGACAg215486503[rn4:19:14102663-14102680:+]0.54351527-16.81-0.1568
MIMAT0012857rno-miR-678171099Rasd2ggaGGUCAGGAACGGGGCUCUg |||| |: |||||||| accCCAGCCUCAACCCCGAGAg22016911712[rn4:19:14103868-14103889:+]0.58241597-32.20-0.1883
MIMAT0000560rno-miR-326171099Rasd2ugaccuccuucccGGGUCUCc ||||||| uacacaccccuccCCCAGAGc2915401560[rn4:19:14103717-14103737:+]0.58241407-12.83-0.1046
MIMAT0004641rno-miR-330171099Rasd2cggauucuguguccGGGUCUCu ||||||| uuacacaccccuccCCCAGAGc2915391560[rn4:19:14103716-14103737:+]0.58241407-16.53-0.1005
MIMAT0000583rno-miR-339-5p171099Rasd2gcacucGAGGACCUCCUGUCCCu ||: | ||||||| caaugcCUUGUCUUUGACAGGGu218649671[rn4:19:14102826-14102848:+]0.54351417-18.34-0.3179
MIMAT0000602rno-miR-20a171099Rasd2gauGGACGUGAUAUUCGU-GAAAu :||| |||: | ||| |||| agcUCUG-ACUGGAUGCAGCUUUc221875897[rn4:19:14103052-14103074:+]0.54351260-13.94-0.1649
MIMAT0000615rno-miR-101b171099Rasd2aagucgaUAGUGUCAUGACAu :|| : ||||||| acaugaaGUCCUUGUACUGUa215622642[rn4:19:14102799-14102819:+]0.54351467-14.66-0.5718
MIMAT0000781rno-miR-9171099Rasd2aguAUG-UCGAUCUAUUGGUUUCu ||: | | || |||||||| gacUAUGACCCUGAAAACCAAAGg22111661189[rn4:19:14103343-14103366:+]0.54351557-16.04-0.1660
MIMAT0000786rno-miR-17-5p171099Rasd2gauGGACGUGACAUUCGU-GAAAc :||| |||| | ||| |||| agcUCUG-ACUGGAUGCAGCUUUc221875897[rn4:19:14103052-14103074:+]0.54351300-15.36-0.1633
MIMAT0000801rno-miR-29b171099Rasd2uuGUGACUAAAGU--UUACC-ACGAu |||||| | | :||| |||| auCACUGAGGUAAUCUGUGGAUGCUg22215621587[rn4:19:14103739-14103764:+]0.58241200-20.20-0.3094
MIMAT0000810rno-miR-31171099Rasd2gucgaUACGGUCGUAGAA-CGGa ||| | |||||| ||| acaggAUGAGAACAUCUUAGCCa218291313[rn4:19:14102468-14102490:+]0.54351250-18.20-0.3331
MIMAT0000814rno-miR-34c171099Rasd2cgUUAGUCGAUUGAU----GUGACGGa |: ::|||:| | ||||||| ggAGGUGGCUGAGGAUUCCCACUGCCc2224369[rn4:19:14102220-14102246:+]0.73491447-18.33-0.1189
MIMAT0000814rno-miR-34c171099Rasd2cguuagucGAUUGAUGUGACGGa || | ||||||| cuguguccCUCAGACCACUGCCu216522544[rn4:19:14102699-14102721:+]0.54351437-18.18-0.1305
MIMAT0000815rno-miR-34a171099Rasd2uguuggucGAUUCU-GUGACGGu || ||| ||||||| cuguguccCUCAGACCACUGCCu215522544[rn4:19:14102699-14102721:+]0.54351537-17.70-0.1318
MIMAT0000815rno-miR-34a171099Rasd2ugUUGGUCGAUUCU-----GUGACGGu |: ::|||:||: ||||||| ggAGGUGGCUGAGGAUUCCCACUGCCc2214369[rn4:19:14102220-14102246:+]0.73491477-21.99-0.1189
MIMAT0000815rno-miR-34a171099Rasd2uguuggucgaUUCUGUG-ACGGu :|||||| |||| cagagauggaGAGACACGUGCCu213501523[rn4:19:14102678-14102700:+]0.54351200-16.98-0.1125
MIMAT0000823rno-miR-101a171099Rasd2aagucaaUAGUGUCAUGACAu :|| : ||||||| acaugaaGUCCUUGUACUGUa215622642[rn4:19:14102799-14102819:+]0.54351467-13.70-0.5718
MIMAT0000825rno-miR-106b171099Rasd2uaGACGUGACAGUCGU-GAAAu ||| |||| ||| |||| cuCUG-ACUGGAUGCAGCUUUc220877897[rn4:19:14103054-14103074:+]0.54351210-15.40-0.1633
MIMAT0000828rno-miR-124171099Rasd2ccguaaguggCG-CACGGAAu || ||||||| gggggcuuggGCAGUGCCUUa2112040[rn4:19:14102197-14102217:+]0.73491417-18.37-0.3822
MIMAT0004729rno-miR-125a-3p171099Rasd2ccGAGGGUUCUUGGAGU-GGACa || ||||| ::||| |||| ugCUGCCAAG-CUUUCAGCCUGa22112791300[rn4:19:14103456-14103477:+]0.49761260-23.53-0.2248
MIMAT0000862rno-miR-185171099Rasd2aguccUUGACG-GAAAG-AGAGGu | :||: ||||| ||||| aauacAUUUGUGCUUUCGUCUCCa21812081231[rn4:19:14103385-14103408:+]0.54351240-18.88-0.8366
MIMAT0000869rno-miR-194171099Rasd2agGUGUACCUCAACGACA-AUGu ::|:|||| | |||| ||| auUGCGUGGACCU-CUGUGUACa22117691790[rn4:19:14103946-14103967:+]0.58241220-16.66-0.4043
MIMAT0000879rno-miR-206171099Rasd2gguguGUGAAGGAAUGUAAGGu | ||| |||||||| acugcCUCUUGGCUACAUUCCc218538559[rn4:19:14102715-14102736:+]0.54351537-14.67-0.1564
MIMAT0000881rno-miR-210171099Rasd2aguCGGCGACAGUGUGCGUGUc ||: :| |:| ||||||| aauGCUCUUCUUA-ACGCACAc22015911611[rn4:19:14103768-14103788:+]0.58241537-16.34-0.2431
MIMAT0000888rno-miR-218171099Rasd2ugUACCAAUCUAGUUC-GUGUu ||| | || |||| |||| agAUGCUCAGUACAAGUCACAg220273294[rn4:19:14102450-14102471:+]0.54351270-11.94-0.2499
MIMAT0000903rno-miR-320171099Rasd2agCGGGA--GAGUUGGGUCGAAAa ||:|| || :|: ||||||| gaGCUCUGACUGGAUGCAGCUUUc221874897[rn4:19:14103051-14103074:+]0.54351597-19.76-0.1080
MIMAT0000903rno-miR-320171099Rasd2agcGGGA-GAG-UUGGGU--CGAAAa |||| ||| ||:||| ||||| uuuCCCUACUCAAAUCCAUUGCUUUa220671696[rn4:19:14102848-14102873:+]0.54351210-22.00-0.1341
MIMAT0001543rno-miR-449a171099Rasd2ugGUCGAUUGUUA--UGUGACGGu ::|||:| :|| ||||||| ggUGGCUGAGGAUUCCCACUGCCc2214669[rn4:19:14102223-14102246:+]0.73491557-20.10-0.1201
MIMAT0001543rno-miR-449a171099Rasd2uggucgauuGUUAUGUGACGGu ||: ||||||| ugugucccuCAGACCACUGCCu214523544[rn4:19:14102700-14102721:+]0.54351457-14.45-0.1293
MIMAT0001543rno-miR-449a171099Rasd2uggUCGAUUGUUAUGUG-ACGGu || |:: :| |||| |||| cagAGAUGGAGAGACACGUGCCu220501523[rn4:19:14102678-14102700:+]0.54351230-15.18-0.1148
MIMAT0003125rno-miR-1171099Rasd2uauGUG-UGAAGAA---AUGUAAGGu ||| :| |||| |||||||| gacCACUGCCUCUUGGCUACAUUCCc220534559[rn4:19:14102711-14102736:+]0.54351577-17.03-0.1564
MIMAT0003176rno-miR-539171099Rasd2uguguGGUUCCUAUUAAAGAGg ||| | ||||||| ccuguCCAUAUAACAUUUCUCg218563584[rn4:19:14102740-14102761:+]0.54351457-9.96-0.3825
MIMAT0003203rno-miR-485171099Rasd2cuuAAGU-AGUGCCGGUCGGAGa | || | || |||||||| uccUGCAGUGAC-CCCAGCCUCa22016811702[rn4:19:14103858-14103879:+]0.58241487-17.10-0.1422
MIMAT0003379rno-miR-378171099Rasd2ggAAGACUGAGGUUCAG-GUCa | || | | |||||| ||| gaUGCUCAGUACAAGUCACAGg220274295[rn4:19:14102451-14102472:+]0.54351270-14.13-0.4683
MIMAT0005320rno-miR-495171099Rasd2uucUUCACGUGGUACAAACAAa || | | : ||||||| aucAAUUAAAGUUGGUUUGUUa22017931814[rn4:19:14103970-14103991:+]0.58241437-6.37-0.4192
MIMAT0005320rno-miR-495171099Rasd2uuCUUCACGU--GGUACAA-ACAAa ||||||:: :| |||| |||| uuGAAGUGUGUUUCCUGUUCUGUUu221590614[rn4:19:14102767-14102791:+]0.54351310-16.75-0.1221
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G100825Rasd2Rattus norvegicus171099
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Rasd2RAID00272698rno-miR-101b-3pmiRNAMIMAT0000615Rasd2mRNA171099Prediction0.2202
Rasd2RAID00291042rno-miR-449a-5pmiRNAMIMAT0001543Rasd2mRNA171099Prediction0.2202
Rasd2RAID00401748rno-miR-326-3pmiRNAMIMAT0000560Rasd2mRNA171099Prediction0.1828
Rasd2RAID00410204rno-miR-770-3pmiRNAMIMAT0017317Rasd2mRNA171099Prediction0.1828
Rasd2RAID00447985rno-miR-101a-3pmiRNAMIMAT0000823Rasd2mRNA171099Prediction0.2202
Rasd2RAID00459837rno-miR-194-5pmiRNAMIMAT0000869Rasd2mRNA171099Prediction0.1828
Rasd2RAID00518140rno-miR-547-5pmiRNAMIMAT0017368Rasd2mRNA171099Prediction0.1828
Rasd2RAID00557933rno-miR-3541miRNAMIMAT0017795Rasd2mRNA171099Prediction0.1828
Rasd2RAID00604616rno-miR-345-3pmiRNAMIMAT0004655Rasd2mRNA171099Prediction0.1828
Rasd2RAID00687538rno-miR-330-5pmiRNAMIMAT0004641Rasd2mRNA171099Prediction0.1828
Rasd2RAID00945416rno-miR-20a-5pmiRNAMIMAT0000602Rasd2mRNA171099Prediction0.1828
Rasd2RAID01150222rno-miR-3586-5pmiRNAMIMAT0017880Rasd2mRNA171099Prediction0.1828
Rasd2RAID01443852rno-miR-329-3pmiRNAMIMAT0000566Rasd2mRNA171099Prediction0.1828
Rasd2RAID01523968rno-miR-34c-5pmiRNAMIMAT0000814Rasd2mRNA171099Prediction0.2202
Rasd2RAID01539432rno-miR-134-3pmiRNAMIMAT0017125Rasd2mRNA171099Prediction0.1828
Rasd2RAID01554814rno-miR-206-3pmiRNAMIMAT0000879Rasd2mRNA171099Prediction0.1828
Rasd2RAID01592487rno-miR-17-5pmiRNAMIMAT0000786Rasd2mRNA171099Prediction0.1828
Rasd2RAID01781205rno-miR-9a-5pmiRNAMIMAT0000781Rasd2mRNA171099Prediction0.2202
Rasd2RAID01795337rno-miR-362-3pmiRNAMIMAT0017357Rasd2mRNA171099Prediction0.1828
Rasd2RAID01818652rno-miR-1-3pmiRNAMIMAT0003125Rasd2mRNA171099Prediction0.1828
Rasd2RAID01996505rno-miR-6318miRNAMIMAT0025055Rasd2mRNA171099Prediction0.1828
Rasd2RAID02028884rno-miR-485-5pmiRNAMIMAT0003203Rasd2mRNA171099Prediction0.1828
Rasd2RAID02132559rno-miR-449c-5pmiRNAMIMAT0017803Rasd2mRNA171099Prediction0.1828
Rasd2RAID02138084rno-miR-339-5pmiRNAMIMAT0000583Rasd2mRNA171099Prediction0.2202
Rasd2RAID02240733rno-miR-3590-3pmiRNAMIMAT0017890Rasd2mRNA171099Prediction0.1828
Rasd2RAID02286759rno-miR-31a-5pmiRNAMIMAT0000810Rasd2mRNA171099Prediction0.1828
Rasd2RAID02304742rno-miR-298-5pmiRNAMIMAT0000900Rasd2mRNA171099Prediction0.1828
Rasd2RAID02366787rno-miR-539-5pmiRNAMIMAT0003176Rasd2mRNA171099Prediction0.1828
Rasd2RAID02502160rno-miR-3072miRNAMIMAT0025071Rasd2mRNA171099Prediction0.1828
Rasd2RAID02625846rno-miR-495miRNAMIMAT0005320Rasd2mRNA171099Prediction0.1828
Rasd2RAID02649402rno-miR-378a-3pmiRNAMIMAT0003379Rasd2mRNA171099Prediction0.1828
Rasd2RAID02723109rno-miR-320-3pmiRNAMIMAT0000903Rasd2mRNA171099Prediction0.1828
Rasd2RAID02725646rno-miR-210-3pmiRNAMIMAT0000881Rasd2mRNA171099Prediction0.1828
Rasd2RAID02891112rno-miR-188-3pmiRNAMIMAT0017297Rasd2mRNA171099Prediction0.1828
Rasd2RAID02908023rno-miR-106b-5pmiRNAMIMAT0000825Rasd2mRNA171099Prediction0.1828
Rasd2RAID02913283rno-miR-185-5pmiRNAMIMAT0000862Rasd2mRNA171099Prediction0.1828
Rasd2RAID03045827rno-miR-218a-5pmiRNAMIMAT0000888Rasd2mRNA171099Prediction0.1828
Rasd2RAID03058229rno-miR-125a-3pmiRNAMIMAT0004729Rasd2mRNA171099Prediction0.1828
Rasd2RAID03111798rno-miR-34a-5pmiRNAMIMAT0000815Rasd2mRNA171099Prediction0.2202
Rasd2RAID03196949rno-miR-497-3pmiRNAMIMAT0017230Rasd2mRNA171099Prediction0.1828
Rasd2RAID03238691rno-miR-34b-5pmiRNAMIMAT0000813Rasd2mRNA171099Prediction0.1828
Rasd2RAID03580540rno-miR-124-3pmiRNAMIMAT0000828Rasd2mRNA171099Prediction0.2202
Rasd2RAID03580563rno-miR-29b-3pmiRNAMIMAT0000801Rasd2mRNA171099Prediction0.1828
Rasd2RAID03764012rno-miR-194-3pmiRNAMIMAT0017148Rasd2mRNA171099Prediction0.1828
Rasd2RAID04058067rno-miR-532-3pmiRNAMIMAT0005323Rasd2mRNA171099Prediction0.1828