DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004732 rno-miR-135a* 64159 Spna2 aaAGUACCGAAGGU---AGGGAUGu | | || || | ||||||| aaUAAAGGACUCAAUUCUCCCUAC- 2 21 320 343 [rn4:3:9021810-9021833:+] 0.4752 143 7 -14.49 -0.9016 MIMAT0000900 rno-miR-298 64159 Spna2 cccuuCUUGUCGGGA-GGAGACGg | |:: | || ||||||| uugcuGCAUGUCACUCCCUCUGCu 2 19 60 83 [rn4:3:9021550-9021573:+] 0.5944 149 7 -20.32 -0.5709 MIMAT0000900 rno-miR-298 64159 Spna2 cccuuCUUGUCGGGA-GGAGACGg | |:: | || ||||||| uugcuGCAUGUCACUCCCUCUGCu 2 19 60 83 [rn4:3:9021550-9021573:+] 0.5944 149 7 -20.32 -0.5713 MIMAT0000901 rno-miR-299 64159 Spna2 uacaUA-CACCCUGCCAUUUGGu || ||| | ||||||| gaaaAUGGUGCUUCAGUAAACCg 2 19 159 181 [rn4:3:9021649-9021671:+] 0.5944 149 7 -14.14 -0.5402 MIMAT0000901 rno-miR-299 64159 Spna2 uacaUA-CACCCUGCCAUUUGGu || ||| | ||||||| gaaaAUGGUGCUUCAGUAAACCg 2 19 159 181 [rn4:3:9021649-9021671:+] 0.5944 149 7 -14.14 -0.5407 MIMAT0003177 rno-miR-541 64159 Spna2 ucacACUGGUUGU-AGUCUUAG-GGAa | ||: || ||| |||| ||| ccgcUUACUUCCAGUCACAAUCACCUu 2 22 179 205 [rn4:3:9021669-9021695:+] 0.5944 124 0 -14.42 -0.2867 MIMAT0003177 rno-miR-541 64159 Spna2 ucacACUGGUUGU-AGUCUUAG-GGAa | ||: || ||| |||| ||| ccgcUUACUUCCAGUCACAAUCACCUu 2 22 179 205 [rn4:3:9021669-9021695:+] 0.5944 124 0 -14.42 -0.2870 MIMAT0005279 rno-miR-466c 64159 Spna2 guacAUGUACGU--GUG-UAGUGu ||| | || ||| ||||| cgcuUACUUCCAGUCACAAUCACc 2 18 180 203 [rn4:3:9021670-9021693:+] 0.5944 120 0 -9.69 -0.8427 MIMAT0005279 rno-miR-466c 64159 Spna2 guacAUGUACGU--GUG-UAGUGu ||| | || ||| ||||| cgcuUACUUCCAGUCACAAUCACc 2 18 180 203 [rn4:3:9021670-9021693:+] 0.5944 120 0 -9.69 -0.8432 MIMAT0012828 rno-miR-362 64159 Spna2 uaAGUG-UGGA-UCCAAGGUUCCUaa |||| ||| | ||:|||||| ugUCACUCCCUCUGCUUUCAAGGAca 3 23 68 93 [rn4:3:9021558-9021583:+] 0.5944 144 0 -20.78 -0.1104 MIMAT0012828 rno-miR-362 64159 Spna2 uaAGUG-UGGA-UCCAAGGUUCCUaa |||| ||| | ||:|||||| ugUCACUCCCUCUGCUUUCAAGGAca 3 23 68 93 [rn4:3:9021558-9021583:+] 0.5944 144 0 -20.78 -0.1106 MIMAT0012855 rno-miR-666 64159 Spna2 ccgaGAGUGUCGGCACGGG-CGa | |||| | ||||| || cugaCCCACAUGCUUGCCCUGCu 2 19 26 48 [rn4:3:9021516-9021538:+] 0.5944 122 0 -21.61 -0.5325 MIMAT0012855 rno-miR-666 64159 Spna2 ccgaGAGUGUCGGCACGGG-CGa | |||| | ||||| || cugaCCCACAUGCUUGCCCUGCu 2 19 26 48 [rn4:3:9021516-9021538:+] 0.5944 122 0 -21.61 -0.5329 MIMAT0000801 rno-miR-29b 64159 Spna2 uugUGACU-AAAGUUUACCACGAu ||| | | |||||||||| aagACUUAGUAGAAAAUGGUGCUu 2 21 148 171 [rn4:3:9021638-9021661:+] 0.5944 159 7 -16.77 -0.8888 MIMAT0000801 rno-miR-29b 64159 Spna2 uugUGACU-AAAGUUUACCACGAu ||| | | |||||||||| aagACUUAGUAGAAAAUGGUGCUu 2 21 148 171 [rn4:3:9021638-9021661:+] 0.5944 159 7 -16.77 -0.8892 MIMAT0000802 rno-miR-29a 64159 Spna2 auuggcuaaagUCUACCACGAu | |||||||| gacuuaguagaAAAUGGUGCUu 2 12 150 171 [rn4:3:9021640-9021661:+] 0.5944 147 7 -14.55 -0.8888 MIMAT0000802 rno-miR-29a 64159 Spna2 auuggcuaaagUCUACCACGAu | |||||||| gacuuaguagaAAAUGGUGCUu 2 12 150 171 [rn4:3:9021640-9021661:+] 0.5944 147 7 -14.55 -0.8892 MIMAT0000803 rno-miR-29c 64159 Spna2 auuggcuaaagUUUACCACGAu |||||||||| gacuuaguagaAAAUGGUGCUu 2 12 150 171 [rn4:3:9021640-9021661:+] 0.5944 155 7 -15.50 -0.8888 MIMAT0000803 rno-miR-29c 64159 Spna2 auuggcuaaagUUUACCACGAu |||||||||| gacuuaguagaAAAUGGUGCUu 2 12 150 171 [rn4:3:9021640-9021661:+] 0.5944 155 7 -15.50 -0.8892 MIMAT0000810 rno-miR-31 64159 Spna2 gucGAUACGGUCGUA-GAACGGa ||: ||| ||| |||||| agcCUGACCCA-CAUGCUUGCCc 2 20 23 44 [rn4:3:9021513-9021534:+] 0.5944 125 6 -17.36 -0.7224 MIMAT0000810 rno-miR-31 64159 Spna2 gucGAUACGGUCGUA-GAACGGa ||: ||| ||| |||||| agcCUGACCCA-CAUGCUUGCCc 2 20 23 44 [rn4:3:9021513-9021534:+] 0.5944 125 6 -17.36 -0.7229 MIMAT0000840 rno-miR-134 64159 Spna2 ggGGAGACCAGUUGGUCAGUGu || || | |||||||| aaCCGCU-UACUUCCAGUCACa 2 21 177 197 [rn4:3:9021667-9021687:+] 0.5944 146 7 -22.43 -0.9233 MIMAT0000840 rno-miR-134 64159 Spna2 ggGGAGACCAGUUGGUCAGUGu || || | |||||||| aaCCGCU-UACUUCCAGUCACa 2 21 177 197 [rn4:3:9021667-9021687:+] 0.5944 146 7 -22.43 -0.9237 MIMAT0001626 rno-miR-431 64159 Spna2 acguacugccggacGUUCUGu |||||| ccuguuuucauguaCAAGACa 2 8 298 318 [rn4:3:9021788-9021808:+] 0.4752 120 6 -12.16 -0.1131 MIMAT0001626 rno-miR-431 64159 Spna2 acguacugccggacGUUCUGu |||||| ccuguuuucauguaCAAGACa 2 8 298 318 [rn4:3:9021788-9021808:+] 0.4752 120 6 -12.16 -0.1157 MIMAT0003179 rno-miR-542-3p 64159 Spna2 aaagucaauaGUUAGACAGUGu | ||||||||| gcuugcccugCUAUCUGUCACc 2 13 37 58 [rn4:3:9021527-9021548:+] 0.5944 152 7 -13.93 -0.9028 MIMAT0003179 rno-miR-542-3p 64159 Spna2 aaagucaauaGUUAGACAGUGu | ||||||||| gcuugcccugCUAUCUGUCACc 2 13 37 58 [rn4:3:9021527-9021548:+] 0.5944 152 7 -13.93 -0.9032 MIMAT0005335 rno-miR-758 64159 Spna2 ccAAUCACCUGGUCCAGUGUUu ||| | ||| ||||||| gcUUACU--UCCA-GUCACAAu 2 21 181 199 [rn4:3:9021671-9021689:+] 0.5944 147 7 -13.40 -0.6651 MIMAT0005335 rno-miR-758 64159 Spna2 ccAAUCACCUGGUCCAGUGUUu ||| | ||| ||||||| gcUUACU--UCCA-GUCACAAu 2 21 181 199 [rn4:3:9021671-9021689:+] 0.5944 147 7 -13.40 -0.6656

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G037241 Sptan1 Rattus norvegicus 64159

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Sptan1 RAID00588424 rno-miR-29b-3p miRNA MIMAT0000801 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID00635571 rno-miR-290 miRNA MIMAT0000893 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID00910977 rno-miR-29c-3p miRNA MIMAT0000803 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID01605157 rno-miR-488-3p miRNA MIMAT0005341 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID01753681 rno-miR-331-5p miRNA MIMAT0017033 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID02059168 rno-miR-431 miRNA MIMAT0001626 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID02392008 rno-miR-29a-3p miRNA MIMAT0000802 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID02543833 rno-miR-292-5p miRNA MIMAT0000896 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID02951497 rno-miR-542-3p miRNA MIMAT0003179 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID03057972 rno-miR-293-5p miRNA MIMAT0012847 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID03112406 rno-miR-134-5p miRNA MIMAT0000840 Sptan1 mRNA 64159 Prediction 0.2202 Sptan1 RAID03326389 rno-miR-31a-5p miRNA MIMAT0000810 Sptan1 mRNA 64159 Prediction 0.1828 Sptan1 RAID03780656 rno-miR-758-3p miRNA MIMAT0005335 Sptan1 mRNA 64159 Prediction 0.2202