PPI - IID Symbol 1 Symbol 2 PMID DBs Evidence Type Adipose Tissue Adrenal Gland Amygdala Bone Bone Marrow Brain Dorsal Root Ganglia Eye Heart Hindgut Hypothalamus Kidney Liver Lung Lymph Nodes Mammary Gland Midgut Neurons Ovary Pancreas Pituitary Gland Placenta Prostate Salivary Gland Skeletal Muscle Small Intestine Spleen Stomach Testes Uterus Col1a1 Ubxn11 ortho Vcpip1 Ubxn11 ortho Wasf1 Ubxn11 ortho Aes Ubxn11 ortho Eif4e Ubxn11 ortho Rtel1 Ubxn11 ortho Protein Rnd2, Rho family GTPase 2, Rho family GTPase 2, isoform CRA_b, RhoN Ubxn11 ortho Intestinal-type alkaline phosphatase 2, IAP-2, Intestinal alkaline phosphatase 2 Ubxn11 ortho Protein Rnd1, Rho family GTPase 1 Ubxn11 ortho Traf2_predicted Ubxn11 ortho Rhobtb3_predicted Ubxn11 ortho Prkaa1 Ubxn11 ortho Pde7a Ubxn11 ortho Protein Enkd1, Putative uncharacterized protein RGD1307357_predicted Ubxn11 ortho Abi2 Ubxn11 ortho Rnd3 Ubxn11 ortho Ubxn11 Abi1 ortho Nckap1 Ubxn11 ortho Vcp Ubxn11 ortho Ubxn11 Prkab2 ortho Sh2d4a Ubxn11 ortho Ubxn11 Nploc4 ortho Ushbp1 Ubxn11 ortho Scnm1_predicted Ubxn11 ortho UPF0704 protein C6orf165 homolog Ubxn11 ortho Cyfip1_predicted Ubxn11 ortho Psma1 Ubxn11 ortho

PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants Q8BLR7 Q8R512 - 11940653 - X 2 Q8BLR7 Q8R512 - 11940653 - X 2 Q8BLR7 Q8R512 - 11940653 - X 2 Q9QYM5 Q8R512 - 11940653 - X 2 Q8R512 P61588 - 11940653 - X 2 Q8R512 P61588 - 11940653 - X 2 Q8R512 P61588 - 11940653 - X 2 Q8R512 anti tag coimmunoprecipitation 18775313 association C 3 Q8R512 anti tag coimmunoprecipitation 18775313 association C 5 Q8BLR7 Q8R512 two hybrid 11940653 - X 2 Q8BLR7 Q8R512 copurification 11940653 - X 2 Q8BLR7 Q8R512 far western blotting 11940653 - X 2 Q9QYM5 Q8R512 two hybrid 11940653 - X 2 Q8R512 P61588 two hybrid 11940653 - X 2 Q8R512 P61588 copurification 11940653 - X 2 Q8R512 P61588 far western blotting 11940653 - X 2

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q8R512 P55072 UBXN11 VCP 0.126 18775313 Q8TAT6 Q8R512 NPLOC4 UBXN11 0.126 18775313 Q96JH7 Q8R512 VCPIP1 UBXN11 0.126 18775313 Q9Y263 Q8R512 PLAA UBXN11 0.126 18775313