Pja2
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000550rno-miR-323192256Pja2ucuccagcuggcaCAUUACAc ||||||| acauugcaugcaaGUAAUGUg2912751295[rn4:9:103003867-103003887:-]0.75361407-11.89-0.6673
MIMAT0000557rno-miR-325-5p192256Pja2uguGAAUGAC-UCGUGGAU-GAUCc |||| || || :||| |||| ggcCUUAAUGUUGC-UCUAGCUAGc22113541377[rn4:9:103003785-103003808:-]0.75361210-13.08-0.5784
MIMAT0004639rno-miR-325-3p192256Pja2aacuauccuccacgaGUUAUUu |||||| cguguaaaucauaaaCAAUAAa2823362357[rn4:9:103002805-103002826:-]0.80301206-5.94-0.1546
MIMAT0000577rno-miR-337192256Pja2uuuccgUAGUAUAUCCUCGACuu | :||||| |||||| cuguuaAAUAUAUAUGAGCUGuu31822302252[rn4:9:103002910-103002932:-]0.80301450-14.72-0.2543
MIMAT0004646rno-miR-338*192256Pja2gugagucgugguccUAUAACAa ||||||| ucugauuuuugcauAUAUUGUa2911941215[rn4:9:103003947-103003968:-]0.75361407-7.79-1.1304
MIMAT0004646rno-miR-338*192256Pja2gugagUCGUGGUCCUAUAACaa ||:| | |||||| gaaaaAGUA--AAAAUAUUGau31820132032[rn4:9:103003130-103003149:-]0.80301220-5.82-0.3112
MIMAT0000604rno-miR-350192256Pja2cacUUUCACAUACCCG-AAACACUu || | || | : ||||||| acuAACUUUUAAGAUUAUUUGUGAu22221902214[rn4:9:103002948-103002972:-]0.80301447-6.66-1.2796
MIMAT0000604rno-miR-350192256Pja2caCUUUCACAUA-CCCGAA-ACACUu |::: | | | |||||| ||||| uaGGGGUUUUCUGGGGCUUCUGUGAc22313101335[rn4:9:103003827-103003852:-]0.75361290-17.40-0.3820
MIMAT0000604rno-miR-350192256Pja2cacuUUCACAUACCCGAAACACuu |: | || | |||||| aaucAGCUUCAUCUGAUUUGUGua32110621085[rn4:9:103004077-103004100:-]0.75361280-8.94-0.1038
MIMAT0000607rno-miR-7a*192256Pja2uaCCGUCUG---ACACUAAACA-ACa |||| || | || ||||| || guGGCAUACGUUUCUGUUUUGUCUGa221264289[rn4:9:103004873-103004898:-]0.67411230-12.50-0.7349
MIMAT0000607rno-miR-7a*192256Pja2uaccgucUGACACUAAACAACa |:| | |||| ||| ccuauuaAUUUUAAUUUUUUGa21620752096[rn4:9:103003066-103003087:-]0.80301230-1.10-0.1543
MIMAT0000614rno-miR-151*192256Pja2ggaguuccucGGAGUCAGAuc |: |||||| uuucuuuuuuCUCCAGUCUua31211081128[rn4:9:103004034-103004054:-]0.75361230-11.98-0.2526
MIMAT0004708rno-miR-9*192256Pja2ugaaagccaaUAGAUCGA-AAUa ||:||||| ||| gccuauuaagAUUUAGCUAUUAu21317161738[rn4:9:103003424-103003446:-]0.66881200-9.10-0.6553
MIMAT0004711rno-miR-21*192256Pja2cuguCGGGUAGCUGACGACAAc |:|:||: ||:|||| uuauGUCUAUUUUAUGUUGUUa21920482069[rn4:9:103003093-103003114:-]0.80301380-12.95-0.1774
MIMAT0004711rno-miR-21*192256Pja2cuguCGGGUAGCUG-AC-GACAAc || ||| | | || ||||| auuuGCACAUGGCCAUGUCUGUUa219829852[rn4:9:103004310-103004333:-]0.75361210-12.29-0.6574
MIMAT0004711rno-miR-21*192256Pja2cugucggguagcugaCGACAAc |||||| uauggauuuauauaaGCUGUUa2822142235[rn4:9:103002927-103002948:-]0.80301206-8.94-0.5291
MIMAT0004711rno-miR-21*192256Pja2cugucggguagcugaCGACAAc |||||| guuaaauauauaugaGCUGUUa2822322253[rn4:9:103002909-103002930:-]0.80301206-8.94-0.2534
MIMAT0003153rno-miR-24-1*192256Pja2gaCUA-UAGUCGAG-UCAUCCGUg |:| :||| | | |||||||| uaGGUGGUCA-CACGAGUAGGCAa221886908[rn4:9:103004254-103004276:-]0.75361527-18.56-0.4634
MIMAT0005441rno-miR-24-2*192256Pja2ugacaaAGUCGAG-UCAUCCGUg ||| | | |||||||| agguggUCA-CACGAGUAGGCAa217887908[rn4:9:103004254-103004275:-]0.75361497-16.65-0.4634
MIMAT0004715rno-miR-27a*192256Pja2acgagUGUUCGUCGAUUCGGGa || | :: |||||||| augaaAC-ACUGUCUAAGCCCu218691711[rn4:9:103004451-103004471:-]0.59511477-18.50-0.1875
MIMAT0004717rno-miR-29b-2*192256Pja2gaUUCGG--UGGUACACUUUGGuc |:||: | :|| |||||| ugAGGCUUAAAUAUAAGAAACCua32111601183[rn4:9:103003979-103004002:-]0.75361310-12.49-0.1718
MIMAT0004718rno-miR-29a*192256Pja2gacuugugguuuucUUUAGUCa ||||||| uucuauagcuucccAAAUCAGc2910471068[rn4:9:103004094-103004115:-]0.75361407-8.12-0.2436
MIMAT0004718rno-miR-29a*192256Pja2gacuugugguuuucUUUAGUca |||||| ggcauuuuccguguAAAUCAua3923272348[rn4:9:103002814-103002835:-]0.80301200-6.20-0.1210
MIMAT0005445rno-miR-29b-1*192256Pja2uuUAGAUUUGGUGGUAUACUUu | :|||: | :||||||| aaAGUUAAG--AAUAUAUGAAg22119852004[rn4:9:103003158-103003177:-]0.80301497-11.94-1.1469
MIMAT0005445rno-miR-29b-1*192256Pja2uuuagauuuGGUGGUAUACUUu :::: ||||||| ucuuauuucUUGUAAUAUGAAu21421032124[rn4:9:103003038-103003059:-]0.80301417-6.92-1.0495
MIMAT0005445rno-miR-29b-1*192256Pja2uuuaGAUUUGGUGGUAUACUUu :|||| :| :||||||: gcugUUAAA-UA-UAUAUGAGc21922292248[rn4:9:103002914-103002933:-]0.80301340-10.94-0.1573
MIMAT0004728rno-miR-124*192256Pja2uaguuccaggcGACACUUGUGc :| ||||||: uaauuuuaauuUUUUGAACAUu21220802101[rn4:9:103003061-103003082:-]0.80301270-5.43-0.2933
MIMAT0000831rno-miR-126*192256Pja2gcgcAUGGUUUUCAUUAUUAc || |||||||| ||| aaauUAGAAAAAGUAAAAAUa21820072027[rn4:9:103003135-103003155:-]0.80301370-5.63-0.1165
MIMAT0004737rno-miR-196a*192256Pja2aguccGUCAA-AGAACA-ACGGCu ||||| | ||| ||||| agcauCAGUUCCCAUGUGUGCCGu21814961519[rn4:9:103003643-103003666:-]0.75361240-16.87-0.1047
MIMAT0004739rno-miR-204*192256Pja2uugCAGGGAAACGGAAG-GGUCg |||::| | ::||| |||| auaGUCUUUCUUUUUUCUCCAGu22011021124[rn4:9:103004038-103004060:-]0.75361270-17.18-1.1976
MIMAT0000893rno-miR-290192256Pja2uuuUUCACGG----GGGUAUCAAACUc :| |||| :::| ||||||| uauGAAUGCCGAUAUUUAAAGUUUGAc22121182144[rn4:9:103003018-103003044:-]0.80301477-12.82-1.0190
MIMAT0000893rno-miR-290192256Pja2uuUUUCACG-GGGGUAUCAAA-CUc | ||| : : ||:|||||| || auAUAGUAUAUGCCGUAGUUUAGAa222105129[rn4:9:103005033-103005057:-]0.67411240-15.86-0.9896
MIMAT0000894rno-miR-291a-5p192256Pja2ucucucccggAGGUGAAACUAc | :|||||||| uuuucuuuuaUGUACUUUGAUu21315521573[rn4:9:103003589-103003610:-]0.71121487-10.46-0.8618
MIMAT0000894rno-miR-291a-5p192256Pja2ucuCUCCCGGA-GGUGAAACUAc || | ::| |||||||| aauGAAGUUUUAGGACUUUGAUg22019001922[rn4:9:103003240-103003262:-]0.66881467-14.79-0.3218
MIMAT0000902rno-miR-300-3p192256Pja2cuUCUCUCGAACGGGAACGUAu ||| | || | ||||||| uaAGAAACCUAACACUUGCAUu22111731194[rn4:9:103003968-103003989:-]0.75361607-12.09-1.0248
MIMAT0000902rno-miR-300-3p192256Pja2cuucucucGAACGGGAACGUAu || :::|||||| cuugcauuCUGAUUUUUGCAUa21511871208[rn4:9:103003954-103003975:-]0.75361306-12.46-0.2806
MIMAT0001320rno-miR-421192256Pja2guuguuuguaaauuACUCCGg |||||| acuguuggcacauuUGAGGCu2811461166[rn4:9:103003996-103004016:-]0.75361206-12.96-0.1309
MIMAT0003113rno-miR-489192256Pja2cgacggUAUA--UACACUACAGUAa |||| || ||||||| guaaaaAUAUUGAUAAAAUGUCAUu21820192043[rn4:9:103003119-103003143:-]0.80301487-9.79-1.2908
MIMAT0003116rno-miR-501192256Pja2aaagugggucccUGUUUCCUaa | |||||| uuaauuuguuuuAAAAAGGAaa31118791900[rn4:9:103003262-103003283:-]0.66881220-7.08-0.1260
MIMAT0003162rno-miR-1*192256Pja2cccAUGUAUUUCUUCA-UACACg |:||| : |||| ||||| cauUGCAU--GCAAGUAAUGUGg22012761296[rn4:9:103003866-103003886:-]0.75361200-12.04-0.7232
MIMAT0003175rno-miR-543*192256Pja2ucuucACGUGGCGCUUACAAa | || :||||||| acauuUUCAAGCUGAAUGUUg217180200[rn4:9:103004962-103004982:-]0.67411447-10.20-0.4372
MIMAT0003382rno-miR-664192256Pja2auccgaccccUCAUUUACUUAu | ||||||||| cagucuuaaaAAUAAAUGAAUu21311211142[rn4:9:103004020-103004041:-]0.75361527-8.17-1.2051
MIMAT0005278rno-miR-466b192256Pja2guaccuGUAUGUGUGUGUGUau |: ||||||||||| uugaccCGAACACACACACAaa317512533[rn4:9:103004629-103004650:-]0.56291480-19.57-0.1096
MIMAT0005280rno-miR-743b192256Pja2agaUAAGUCAUACCACAGAAAg |||:| | | ||||| | gucAUUUA-UCUUAUGUCUAUu22020382058[rn4:9:103003104-103003124:-]0.80301210-5.11-0.1118
MIMAT0005281rno-miR-871192256Pja2acACU-GGC-CGUGGU-UAGACUUAu ||| ::| |:| :| ||||||:| ucUGAUUUGUGUAAUAUAUCUGAGUa22210731098[rn4:9:103004064-103004089:-]0.75361380-16.33-0.1642
MIMAT0005283rno-miR-872*192256Pja2ucCUCCGAUGACGUUAUC-AAGu |:| ||:| | |||| ||| ucGGGAAUAUUUCUAUAGCUUCc22110371059[rn4:9:103004103-103004125:-]0.75361240-8.82-0.9622
MIMAT0005286rno-miR-878192256Pja2agaugggucauaccACAGUACg ||||||| aaacuuccugaaacUGUCAUGu29569590[rn4:9:103004572-103004593:-]0.62771407-14.39-0.7153
MIMAT0005286rno-miR-878192256Pja2agAUGGGUCAUACCACAGUAcg ||:: | || |||||| aaUAUUGA-UAAAAUGUCAUuu32120242044[rn4:9:103003118-103003138:-]0.80301260-5.68-0.2695
MIMAT0005308rno-miR-380192256Pja2gcguAC-AAGAUACCAGUUGGUa || ||| | ||||||| gguuUGAUUCCAAACUCAACCAg21917551777[rn4:9:103003385-103003407:-]0.66881497-11.95-0.2446
MIMAT0005317rno-miR-463192256Pja2gaUGGGUUUAACCGCAGAUAGu |:::| || :||||||: ucAUUUAUCUU-AUGUCUAUUu22120392059[rn4:9:103003103-103003123:-]0.80301300-10.62-0.2463
MIMAT0005318rno-miR-471192256Pja2cacuuuUCGUGAUAUGAUGCAu :|| | ||||||| guuguuGGCUCCUGACUACGUa21718311852[rn4:9:103003310-103003331:-]0.66881447-16.24-0.1747
MIMAT0005329rno-miR-674-5p192256Pja2auguggugaggGUA-GAGUCACg :|| ||||||| aauaaacaggaUAUACUCAGUGu21223522374[rn4:9:103002788-103002810:-]0.80301427-14.45-1.1528
MIMAT0005330rno-miR-674-3p192256Pja2aacaagacUCUACCCUCGACAc | || ||||||| uguuaaauAUAUAUGAGCUGUu21522312252[rn4:9:103002910-103002931:-]0.80301467-12.10-1.2870
MIMAT0005330rno-miR-674-3p192256Pja2aacaagacucuacccUCGACAc |||||| auauggauuuauauaAGCUGUu2822132234[rn4:9:103002928-103002949:-]0.80301206-8.11-0.3289
MIMAT0005334rno-miR-743a192256Pja2agAUGGG-UC--AAACCGCAGAAAg ||:|: || ||| |||||| uaUAUCUGAGUAUUUAUAGUCUUUc22110871111[rn4:9:103004051-103004075:-]0.75361226-14.10-0.2742
MIMAT0005338rno-miR-770192256Pja2gcaccgGGUCUGUGCACCACga | || |:|||||| ugcaugCAAGUAAUGUGGUGaa31712791300[rn4:9:103003862-103003883:-]0.75361320-16.41-0.1462
MIMAT0012823rno-miR-490192256Pja2gucGUACCUCAGGAGGUCCAAc || | :||| ||||||| uguCA-GAGGUCACCCAGGUUa22014761496[rn4:9:103003666-103003686:-]0.75361537-19.67-0.5799
MIMAT0012824rno-miR-513192256Pja2uacuUUCUGUGGAAGAACACUu |||| :| :|||||| uuuuAAGA---UUAUUUGUGAu21921962214[rn4:9:103002948-103002966:-]0.80301306-9.85-0.2754
MIMAT0012826rno-miR-220192256Pja2uccagagacUGUGACACCACc ::| ||||||| ugcaugcaaGUAAUGUGGUGa21312791299[rn4:9:103003863-103003883:-]0.75361447-11.97-1.1407
MIMAT0012826rno-miR-220192256Pja2ucCAGAGACUGUGACACC-ACc | :|||| ||||||| || ggGCUUCUGUGACUGUGGAUGc22013231344[rn4:9:103003818-103003839:-]0.75361310-23.76-0.8127
MIMAT0012826rno-miR-220192256Pja2uccAGAGACUGUGAC-ACCACc |:| ||| :|| ||||| aguUUUAGGACUUUGAUGGUGg21919051926[rn4:9:103003236-103003257:-]0.66881220-21.22-0.3810
MIMAT0012829rno-miR-511192256Pja2acucacGUCUCGU-UUUCCGUa |||| :| ||||||| ucacccCAGAUUAGAAAGGCAc216858879[rn4:9:103004283-103004304:-]0.75361547-14.10-0.4043
MIMAT0012831rno-miR-544192256Pja2cucgaacGAUUUUUACGUCUUa :||:: ||||||| acugaauUUAGGUUUGCAGAAg216151172[rn4:9:103004990-103005011:-]0.67411477-13.83-0.9503
MIMAT0012834rno-miR-592192256Pja2uguaguagcguauaacUGUGUUa |||||| uuugacccgaacacacACACAAa28511533[rn4:9:103004629-103004651:-]0.56291206-7.32-0.1170
MIMAT0012846rno-miR-201192256Pja2uucUUGUUA-CG-GAAUGACUCa |:| :| || ||||||||| auuAGCUGUGGCACUUACUGAGu21915711593[rn4:9:103003569-103003591:-]0.66881567-18.97-0.5715
MIMAT0012848rno-miR-294192256Pja2ucUAUCCCGG--AGGUAAAACUc || |||| |: ||||| | uuAUUUGGCCUAUUAAUUUUAAu22020672089[rn4:9:103003073-103003095:-]0.80301220-10.32-0.1020
MIMAT0012848rno-miR-294192256Pja2ucuaucccggagguAAAACUc |||||| uauuaauuuuaauuUUUUGAa2820772097[rn4:9:103003065-103003085:-]0.80301206-4.08-0.4794
MIMAT0012849rno-miR-295192256Pja2cuUCACACGGGGUGUAAACUCa | ||| : |||||||||| ucACUGU-UGGCACAUUUGAGg22111441164[rn4:9:103003998-103004018:-]0.75361587-15.20-0.3944
MIMAT0012850rno-miR-465192256Pja2gugUGGUCGU---GGCAAGAUUUAu |:| ||| :| |||||||| uaaAUCUGCAAAUUCCUUCUAAAUc2203862[rn4:9:103005100-103005124:-]0.61901547-12.94-0.7192
MIMAT0012850rno-miR-465192256Pja2guguggucGUGGCAAGAU-UUAu :|::|||||| ||| gauugguuUAUUGUUCUACAAUc21522972319[rn4:9:103002843-103002865:-]0.80301220-10.46-0.5596
MIMAT0012860rno-miR-496192256Pja2cucuaaccgguacauUAUGAGu |||||| aacaauaaacaggauAUACUCa2823492370[rn4:9:103002792-103002813:-]0.80301206-10.20-0.1030
MIMAT0000596rno-miR-346192256Pja2ucucCGUCCG-UGAGUC-CGUCUGu |:|||| | || | |||||| acgaGUAGGCAAGUCUGUGCAGACg220897921[rn4:9:103004241-103004265:-]0.75361306-26.36-0.1778
MIMAT0000788rno-miR-19b192256Pja2agUCAAAACGUACCUAAACGUGu || | || | ||||||||| ggAGAUCUGAA--GAUUUGCACa222817837[rn4:9:103004325-103004345:-]0.67431587-14.84-0.6438
MIMAT0000788rno-miR-19b192256Pja2agucaaAACGUA--CCU--AAACGUGu |||||| || ||||||: uaacacUUGCAUUCUGAUUUUUGCAUa21811821208[rn4:9:103003954-103003980:-]0.75361350-13.65-0.2450
MIMAT0000789rno-miR-19a192256Pja2agUCAAAACGUAUCUAAACGUGu || | || | |||||||||| ggAGAUCUG-A-AGAUUUGCACa222817837[rn4:9:103004325-103004345:-]0.67431617-16.98-0.6438
MIMAT0000789rno-miR-19a192256Pja2agucaaAACGUA--UCU--AAACGUGu |||||| || ||||||: uaacacUUGCAUUCUGAUUUUUGCAUa21811821208[rn4:9:103003954-103003980:-]0.75361350-15.05-0.2450
MIMAT0000790rno-miR-21192256Pja2agUUGUAGUCAGA-CUAUUCGAu :|:|| : |:| ||||||| guGAUAUGGAUUUAUAUAAGCUg22122102232[rn4:9:103002930-103002952:-]0.80301517-10.13-1.2462
MIMAT0000790rno-miR-21192256Pja2aguuguagucagacuAUUCGAu |||||| cuuaguuguuaucucUAAGCUa2821682189[rn4:9:103002973-103002994:-]0.80301206-9.30-0.2542
MIMAT0000795rno-miR-25192256Pja2agucuggcucugUUCACGUUac | |||||| cuucuaaaucugAUGUGCAAau3115374[rn4:9:103005088-103005109:-]0.61901220-9.10-0.1175
MIMAT0000798rno-miR-27b192256Pja2cgucUUGAAUCGGUGACACUu :|: |: ||||||| aucaGAUGUGAAAACUGUGAu218332352[rn4:9:103004810-103004830:-]0.67411417-15.56-0.6540
MIMAT0000799rno-miR-27a192256Pja2cgccUUGAAUCGGUGACACUu :|: |: ||||||| aucaGAUGUGAAAACUGUGAu218332352[rn4:9:103004810-103004830:-]0.67411417-11.12-0.6540
MIMAT0000811rno-miR-32192256Pja2acguugaaucAUUACACGUUau |:|||||||| cuucuaaaucUGAUGUGCAAau3135374[rn4:9:103005088-103005109:-]0.61901360-10.71-0.1163
MIMAT0000812rno-miR-33192256Pja2acGUUACGUUGAUGUUACGUg | :| || |: |||||| agCUGUUAAAAUGGAAUGCAa22022462266[rn4:9:103002896-103002916:-]0.80301236-9.82-0.1131
MIMAT0000816rno-miR-92a192256Pja2guccggcccugUUCACGUUau | |||||| uucuaaaucugAUGUGCAAau3115474[rn4:9:103005088-103005108:-]0.61901220-7.55-0.1163
MIMAT0004729rno-miR-125a-3p192256Pja2ccgAGG-GUUCUUGGAG-UGGACa ||| |: | || || ||||| ccaUCCGCGUGCACAUCUACCUGc2209991022[rn4:9:103004140-103004163:-]0.75361220-15.39-0.1893
MIMAT0000836rno-miR-130a192256Pja2uaCGGGAAAAUUGUAACG-UGAc |:|| |||: : |||| ||| ugGUCCCUUUGCUUUUGCUACUu221416438[rn4:9:103004724-103004746:-]0.56291280-14.65-0.2572
MIMAT0000837rno-miR-130b192256Pja2uacGGGAAAGUAGUAACG-UGAc |||||| |: |||| ||| gguCCCUUUGCUU-UUGCUACUu220417438[rn4:9:103004724-103004745:-]0.56291250-13.61-0.2401
MIMAT0000846rno-miR-141192256Pja2gguagaaAUGGUCUGUCACAAu || :| ||||||| aacaggaUA-UACUCAGUGUUc21623562376[rn4:9:103002786-103002806:-]0.80301417-11.44-0.9929
MIMAT0000846rno-miR-141192256Pja2ggUAGA-AAUGGUCUGUC-ACAAu | || |||:| | ||| |||| uuAGCUAUUAUCUGCCAGUUGUUa22117281751[rn4:9:103003411-103003434:-]0.66881270-14.83-0.3577
MIMAT0000849rno-miR-143192256Pja2acUCGAUGUCACGAAGUAGAGu | | |||| ||||||| guAACGUCAGU-AGUCAUCUCu221243263[rn4:9:103004899-103004919:-]0.67411467-14.90-0.3221
MIMAT0000849rno-miR-143192256Pja2acUCGAUGUCACGAAGUA-GAGu | ||: ||||||||| ||| uuAUCUGAUGUGCUUCAUGCUCg221645667[rn4:9:103004495-103004517:-]0.62771360-22.18-0.3081
MIMAT0000849rno-miR-143192256Pja2acucgaugucaCGAAGUAGAgu ||||||||| uucccaaaucaGCUUCAUCUga31210561077[rn4:9:103004085-103004106:-]0.75361350-14.54-0.1288
MIMAT0000851rno-miR-145192256Pja2ucccuaaggACCCUUUUGAC-CUg || |||||||| || cacaucagaUGUGAAAACUGUGAu215329352[rn4:9:103004810-103004833:-]0.67411260-14.53-0.5070
MIMAT0000857rno-miR-181c192256Pja2ugaGUGGCUGUCCAACUUACAa ||:: || | ||||||| aaaCAUUUUCAAGCUGAAUGUu220178199[rn4:9:103004963-103004984:-]0.67411557-13.49-0.3040
MIMAT0000857rno-miR-181c192256Pja2ugAGUGGCUGUCCAACUUACaa |: |: ::| |||||| uaUUUCUUGUAAUAUGAAUGcc32121062127[rn4:9:103003035-103003056:-]0.80301240-7.74-0.1946
MIMAT0000858rno-miR-181a192256Pja2ugaGUGGCUGUCGCAACUUACAa ||:: || | ||||||| aaaCAUUUUCA-AGCUGAAUGUu221178199[rn4:9:103004963-103004984:-]0.67411467-13.89-0.3040
MIMAT0000858rno-miR-181a192256Pja2ugaguggcugucgcaACUUACaa |||||| uuauuucuuguaauaUGAAUGcc3921052127[rn4:9:103003035-103003057:-]0.80301200-7.25-0.1928
MIMAT0000859rno-miR-181b192256Pja2uggGUGGCUG-UCGUUACUUACAa ||:: | ||| ||||||| aaaCAUUUUCAAGC--UGAAUGUu221178199[rn4:9:103004963-103004984:-]0.67411447-13.76-0.2845
MIMAT0000859rno-miR-181b192256Pja2uggguggcugucguUACUUACaa ||||||| uuauuucuuguaauAUGAAUGcc31021052127[rn4:9:103003035-103003057:-]0.80301250-8.84-0.1928
MIMAT0000862rno-miR-185192256Pja2aguccuuGACGGAAAG-AGAGGu ||||:| || ||||| cuaaucuCUGCUUGUCUUCUCCu21614151437[rn4:9:103003725-103003747:-]0.75361270-17.71-0.3186
MIMAT0000863rno-miR-186192256Pja2ucGGGU-UUUCCUCUUAAGAAAc ||:| || ||||:||| ggCCUAUUAAUUUUAAUUUUUUg22120732095[rn4:9:103003067-103003089:-]0.80301310-13.09-0.1004
MIMAT0000869rno-miR-194192256Pja2agGUGUACCUCAAC-GACAAUGu ||||||| || ||||||| ugCACAUGGCCAUGUCUGUUACa221832854[rn4:9:103004308-103004330:-]0.75361677-24.69-0.7366
MIMAT0000869rno-miR-194192256Pja2agguguaccucaacGACAAUGu ||||||| cucuugcuguccauCUGUUACg2918031824[rn4:9:103003338-103003359:-]0.66881407-13.80-0.3492
MIMAT0000869rno-miR-194192256Pja2aggUGUACCUCAA------CGACAAUgu |:||||| || ||||||| gugAUAUGGAUUUAUAUAAGCUGUUAaa32022102237[rn4:9:103002925-103002952:-]0.80301340-15.07-0.3033
MIMAT0000869rno-miR-194192256Pja2aggUGUACCUCAACGACAAUgu |:|| | ||||||| uaaAUAUAUAUGAGCUGUUAaa32022342255[rn4:9:103002907-103002928:-]0.80301310-12.35-0.1156
MIMAT0000873rno-miR-200c192256Pja2gguAGUAAUGGGCCGUCAUAAu |::| :: | ||||||| guuUUGUGUUUAGUCAGUAUUa22016321653[rn4:9:103003509-103003530:-]0.66881477-10.36-0.6980
MIMAT0000873rno-miR-200c192256Pja2gguaguaaugggccgUCAUAAu |||||| uguguaauauaucugAGUAUUu2810801101[rn4:9:103004061-103004082:-]0.75361206-9.97-0.1295
MIMAT0000874rno-miR-200a192256Pja2uguagCAAUGGUCUGUCACAAu | || :| ||||||| aacagGAUA-UACUCAGUGUUc21823562376[rn4:9:103002786-103002806:-]0.80301437-11.44-0.9958
MIMAT0000874rno-miR-200a192256Pja2uguagcAAUGGUCUGUC-ACAAu |||:| | ||| |||| uagcuaUUAUCUGCCAGUUGUUa21717291751[rn4:9:103003411-103003433:-]0.66881240-12.60-0.3577
MIMAT0000875rno-miR-200b192256Pja2caguAGUAAUGGUCCGUCAUAAu |::| ::|| ||||||| cguuUUGUGUUUAGUCAGUAUUa22016311653[rn4:9:103003509-103003531:-]0.66881557-13.51-0.6980
MIMAT0000875rno-miR-200b192256Pja2caguaguaaugguccgUCAUAAu |||||| uuguguaauauaucugAGUAUUu2810791101[rn4:9:103004061-103004083:-]0.75361206-6.28-0.1295
MIMAT0000878rno-miR-205192256Pja2gucugaggccaccuUACUUCCu ||||||| aaaguuaagaauauAUGAAGGu2919852006[rn4:9:103003156-103003177:-]0.80301407-10.60-1.3006
MIMAT0000878rno-miR-205192256Pja2gucugaggccACCUUAC-UUCCu ||||||| |||| gcuguuaaaaUGGAAUGCAAGGu21322472269[rn4:9:103002893-103002915:-]0.80301240-16.21-1.1099
MIMAT0000880rno-miR-208192256Pja2uguucGAAAAACGA--GCAGAAUa |||||| || |||||| ucuuuCUUUUUUCUCCAGUCUUAa21811061129[rn4:9:103004033-103004056:-]0.75361326-13.26-0.1772
MIMAT0000883rno-miR-212192256Pja2acCGGC-ACUGACCUCUG-ACAAu ||:| ||| |||||| |||| cgGCUGCUGA-AGGAGACUUGUUu22118571879[rn4:9:103003283-103003305:-]0.66881290-25.65-0.5470
MIMAT0000903rno-miR-320192256Pja2agcgGGAGAGUUGGGUCGAAaa |:|| ||| :|||||| auagCUUCCCAAAUCAGCUUca31910511072[rn4:9:103004090-103004111:-]0.75361460-16.65-0.1713
MIMAT0000903rno-miR-320192256Pja2agcgggagagUUGGGUCGAAAa ::| ||||||| agauuagaaaGGCACAGCUUUu213865886[rn4:9:103004276-103004297:-]0.75361447-10.85-0.4861
MIMAT0001538rno-miR-429192256Pja2ugcCGUAAUGGUCUGUCAUAAu |::|| :|| ||||||| uuuGUGUU--UAGUCAGUAUUa22016341653[rn4:9:103003509-103003528:-]0.66881527-11.85-0.6980
MIMAT0001538rno-miR-429192256Pja2ugccguaauggucugUCAUAAu |||||| uguguaauauaucugAGUAUUu2810801101[rn4:9:103004061-103004082:-]0.75361206-7.12-0.1295
MIMAT0003122rno-miR-370192256Pja2uugGUCCAAGGUG--GGGUCGUCCg |||| | || |:||||||| gcaCAGGGACAACGGCUCAGCAGGc221961985[rn4:9:103004177-103004201:-]0.75361597-32.02-0.2289
MIMAT0003176rno-miR-539192256Pja2ugugugguuccuAUUAAAGAGg | ||||||: uugaacauuuucUUAUUUCUUg21120932114[rn4:9:103003048-103003069:-]0.80301260-6.98-0.2961
MIMAT0003176rno-miR-539192256Pja2ugugugguuccuauuAAAGAGg |||||| uuauagucuuucuuuUUUCUCc2811001121[rn4:9:103004041-103004062:-]0.75361206-9.80-0.1429
MIMAT0003193rno-miR-494192256Pja2ucCAA--AGGGC-A-CAUACAAAGu ||| ||: | | | ||||||| auGUUGCUCUAGCUAGCAUGUUUCc22013611385[rn4:9:103003777-103003801:-]0.75361447-9.23-0.4727
MIMAT0003193rno-miR-494192256Pja2ucCAAAGGGCACAUACAAAGu |||||: | |:|||||| ggGUUUCU--UUUGUGUUUCu22021512169[rn4:9:103002993-103003011:-]0.80301446-17.26-0.1063
MIMAT0003194rno-miR-376c192256Pja2ugcacUUUAAAGG-AGA-UACAa | :||||| ||| |||| cuagcAUGUUUCCUUCUAAUGUa21713731395[rn4:9:103003767-103003789:-]0.75361230-10.93-0.9718
MIMAT0003199rno-miR-381192256Pja2cucucGAA-CGGGAACAUau ||| ::|||||| auuuuCUUAUUUCUUGUAau31520992118[rn4:9:103003044-103003063:-]0.80301250-8.35-0.2033
MIMAT0003208rno-miR-374192256Pja2gugaaucguccaacaUAAUAUa |||||| ucugaugugcaaauaAUUAUAu286182[rn4:9:103005080-103005101:-]0.61901206-4.62-0.1246
MIMAT0003210rno-miR-363192256Pja2augucuaccuAUGGCACGUUaa |: :|||||| cuucuaaaucUGAUGUGCAAau3135374[rn4:9:103005088-103005109:-]0.61901240-8.25-0.1151
MIMAT0003381rno-miR-499192256Pja2uuuguAGUGACGUUCAGAAUu |: || | ||||||| ucuuuUUUCU-CCAGUCUUAa21711101129[rn4:9:103004033-103004052:-]0.75361467-9.84-1.0928
MIMAT0003381rno-miR-499192256Pja2uuugUAGUGACGUUCAGAAuu | :|:| |||||| ucugAGUAUUUAUAGUCUUuc31810911111[rn4:9:103004051-103004071:-]0.75361250-7.84-0.2315
MIMAT0005299rno-miR-181d192256Pja2uggGUGGCUGUUGUUACUUACAa ||:: ||| : ||||||| aaaCAUUUUCAA-GCUGAAUGUu221178199[rn4:9:103004963-103004984:-]0.67411507-13.18-0.3014
MIMAT0005299rno-miR-181d192256Pja2uggguGGCUGUUGUUACUUACaa |: ::||: ||||||| uauuuCUUGUAAU-AUGAAUGcc31921062127[rn4:9:103003035-103003056:-]0.80301320-10.65-0.1928
MIMAT0005299rno-miR-181d192256Pja2uggguggcUGUUGU-UACUUACAa | ||:| ||||| || aaaaguuaAGAAUAUAUGAAGGUa21619842007[rn4:9:103003155-103003178:-]0.80301220-7.95-0.1374
MIMAT0005309rno-miR-384-5p192256Pja2ugUAACGGAUC-CUUAACAA-AUGu | || :|:| |||||| ||| guAAUGAUUGGUUUAUUGUUCUACa22222922316[rn4:9:103002846-103002870:-]0.80301200-11.52-0.9269
MIMAT0005311rno-miR-410192256Pja2uguccgguagacacAAUAUAa |||||| ugaugugcaaauaaUUAUAUa286383[rn4:9:103005079-103005099:-]0.61901206-4.03-0.2438
MIMAT0005311rno-miR-410192256Pja2uguccgguagacacAAUAUAa |||||| uuugugauauggauUUAUAUa2822072227[rn4:9:103002935-103002955:-]0.80301206-5.89-0.2143
MIMAT0005314rno-miR-425192256Pja2aguugcccucacuagcACAGUAa |||||| aaaaauauugauaaaaUGUCAUu2820212043[rn4:9:103003119-103003141:-]0.80301206-9.43-0.3329
MIMAT0005316rno-miR-455192256Pja2gcUACAUCAGGUUUCCGUGUAu || | |:: ||||||| gaAUUUUCACUGUUGGCACAUu22111381159[rn4:9:103004003-103004024:-]0.75361447-12.23-1.0529
MIMAT0005320rno-miR-495192256Pja2uucuucacgugguacAAACAAa |||||| ggagacuuguuuuaaUUUGUUu2818681889[rn4:9:103003273-103003294:-]0.66881206-8.26-0.1024
MIMAT0005339rno-miR-873192256Pja2uccUCUGAGUGUUCAAGGACg |||: :| || |||||| cuuAGAUGUA-AACUUCCUGa219560579[rn4:9:103004583-103004602:-]0.62771286-11.90-0.1173
MIMAT0005340rno-miR-92b192256Pja2ccuccggcccuGCU-CACGUUau :|| |||||| ccuucuaaaucUGAUGUGCAAau3125274[rn4:9:103005088-103005110:-]0.61901220-8.49-0.1163
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G100607Pja2Rattus norvegicus192256
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Pja2RAID00059547rno-miR-195-3pmiRNAMIMAT0017149Pja2mRNA192256Prediction0.1828
Pja2RAID00071362rno-miR-92b-3pmiRNAMIMAT0005340Pja2mRNA192256Prediction0.1828
Pja2RAID00203832rno-miR-425-5pmiRNAMIMAT0005314Pja2mRNA192256Prediction0.1828
Pja2RAID00340421rno-miR-33-3pmiRNAMIMAT0017104Pja2mRNA192256Prediction0.1828
Pja2RAID00355541rno-miR-143-3pmiRNAMIMAT0000849Pja2mRNA192256Prediction0.1828
Pja2RAID00358945rno-miR-32-5pmiRNAMIMAT0000811Pja2mRNA192256Prediction0.1828
Pja2RAID00419011rno-miR-200a-3pmiRNAMIMAT0000874Pja2mRNA192256Prediction0.1828
Pja2RAID00432298rno-miR-383-3pmiRNAMIMAT0017197Pja2mRNA192256Prediction0.1828
Pja2RAID00442281rno-miR-92a-3pmiRNAMIMAT0000816Pja2mRNA192256Prediction0.1828
Pja2RAID00468705rno-miR-205miRNAMIMAT0000878Pja2mRNA192256Prediction0.2202
Pja2RAID00469269rno-miR-130a-3pmiRNAMIMAT0000836Pja2mRNA192256Prediction0.1828
Pja2RAID00531490rno-miR-381-3pmiRNAMIMAT0003199Pja2mRNA192256Prediction0.1828
Pja2RAID00595315rno-miR-429miRNAMIMAT0001538Pja2mRNA192256Prediction0.2202
Pja2RAID00621572rno-miR-3587miRNAMIMAT0017883Pja2mRNA192256Prediction0.1828
Pja2RAID00641546rno-miR-200c-3pmiRNAMIMAT0000873Pja2mRNA192256Prediction0.2202
Pja2RAID00674559rno-miR-5132-3pmiRNAMIMAT0035751Pja2mRNA192256Prediction0.1828
Pja2RAID00678680rno-miR-384-5pmiRNAMIMAT0005309Pja2mRNA192256Prediction0.1828
Pja2RAID00701833rno-miR-370-3pmiRNAMIMAT0003122Pja2mRNA192256Prediction0.1828
Pja2RAID00702341rno-miR-33-5pmiRNAMIMAT0000812Pja2mRNA192256Prediction0.1828
Pja2RAID00746313rno-miR-21-5pmiRNAMIMAT0000790Pja2mRNA192256Prediction0.2202
Pja2RAID00753542rno-miR-320-3pmiRNAMIMAT0000903Pja2mRNA192256Prediction0.1828
Pja2RAID00785546rno-miR-200b-3pmiRNAMIMAT0000875Pja2mRNA192256Prediction0.2202
Pja2RAID00817111rno-miR-130b-3pmiRNAMIMAT0000837Pja2mRNA192256Prediction0.1828
Pja2RAID00965836rno-miR-505-5pmiRNAMIMAT0017226Pja2mRNA192256Prediction0.1828
Pja2RAID00978056rno-miR-206-5pmiRNAMIMAT0017154Pja2mRNA192256Prediction0.1828
Pja2RAID01277323rno-miR-376c-3pmiRNAMIMAT0003194Pja2mRNA192256Prediction0.1828
Pja2RAID01277902rno-miR-19a-3pmiRNAMIMAT0000789Pja2mRNA192256Prediction0.1828
Pja2RAID01377004rno-miR-873-5pmiRNAMIMAT0005339Pja2mRNA192256Prediction0.1828
Pja2RAID01459123rno-miR-181b-1-3pmiRNAMIMAT0017139Pja2mRNA192256Prediction0.1828
Pja2RAID01490338rno-miR-25-3pmiRNAMIMAT0000795Pja2mRNA192256Prediction0.1828
Pja2RAID01611745rno-miR-664-3pmiRNAMIMAT0003382Pja2mRNA192256Prediction0.1828
Pja2RAID01718402rno-miR-674-3pmiRNAMIMAT0005330Pja2mRNA192256Prediction0.1828
Pja2RAID01812811rno-miR-350miRNAMIMAT0000604Pja2mRNA192256Prediction0.1828
Pja2RAID01838605rno-miR-181d-5pmiRNAMIMAT0005299Pja2mRNA192256Prediction0.2202
Pja2RAID01934909rno-miR-325-3pmiRNAMIMAT0004639Pja2mRNA192256Prediction0.1828
Pja2RAID02100529rno-miR-499-5pmiRNAMIMAT0003381Pja2mRNA192256Prediction0.1828
Pja2RAID02166608rno-miR-471-3pmiRNAMIMAT0017310Pja2mRNA192256Prediction0.1828
Pja2RAID02254520rno-miR-141-3pmiRNAMIMAT0000846Pja2mRNA192256Prediction0.1828
Pja2RAID02333275rno-miR-145-5pmiRNAMIMAT0000851Pja2mRNA192256Prediction0.1828
Pja2RAID02403634rno-miR-338-5pmiRNAMIMAT0004646Pja2mRNA192256Prediction0.1828
Pja2RAID02406004rno-miR-27a-3pmiRNAMIMAT0000799Pja2mRNA192256Prediction0.1828
Pja2RAID02465820rno-miR-374-5pmiRNAMIMAT0003208Pja2mRNA192256Prediction0.1828
Pja2RAID02515976rno-miR-208a-3pmiRNAMIMAT0000880Pja2mRNA192256Prediction0.1828
Pja2RAID02616632rno-miR-194-5pmiRNAMIMAT0000869Pja2mRNA192256Prediction0.2202
Pja2RAID02660617rno-miR-19b-3pmiRNAMIMAT0000788Pja2mRNA192256Prediction0.1828
Pja2RAID02693661rno-miR-539-5pmiRNAMIMAT0003176Pja2mRNA192256Prediction0.1828
Pja2RAID02806969rno-miR-300-3pmiRNAMIMAT0000902Pja2mRNA192256Prediction0.1828
Pja2RAID02841762rno-miR-185-5pmiRNAMIMAT0000862Pja2mRNA192256Prediction0.1828
Pja2RAID02851044rno-miR-3589miRNAMIMAT0017888Pja2mRNA192256Prediction0.1828
Pja2RAID03079851rno-miR-346miRNAMIMAT0000596Pja2mRNA192256Prediction0.1828
Pja2RAID03205039rno-miR-186-5pmiRNAMIMAT0000863Pja2mRNA192256Prediction0.1828
Pja2RAID03254292rno-miR-410-3pmiRNAMIMAT0005311Pja2mRNA192256Prediction0.1828
Pja2RAID03398354rno-miR-125a-3pmiRNAMIMAT0004729Pja2mRNA192256Prediction0.1828
Pja2RAID03469165rno-miR-29b-1-5pmiRNAMIMAT0005445Pja2mRNA192256Prediction0.1828
Pja2RAID03470800rno-miR-363-3pmiRNAMIMAT0003210Pja2mRNA192256Prediction0.1828
Pja2RAID03532812rno-miR-544-3pmiRNAMIMAT0012831Pja2mRNA192256Prediction0.1828
Pja2RAID03533782rno-miR-181a-5pmiRNAMIMAT0000858Pja2mRNA192256Prediction0.2202
Pja2RAID03651662rno-miR-212-3pmiRNAMIMAT0000883Pja2mRNA192256Prediction0.1828
Pja2RAID03673187rno-miR-880-5pmiRNAMIMAT0017292Pja2mRNA192256Prediction0.1828
Pja2RAID03753055rno-miR-495miRNAMIMAT0005320Pja2mRNA192256Prediction0.1828
Pja2RAID03753840rno-miR-27b-3pmiRNAMIMAT0000798Pja2mRNA192256Prediction0.1828
Pja2RAID03761832rno-miR-181c-5pmiRNAMIMAT0000857Pja2mRNA192256Prediction0.2202
Pja2RAID03846492rno-miR-181b-5pmiRNAMIMAT0000859Pja2mRNA192256Prediction0.2202
Pja2RAID03858909rno-miR-380-5pmiRNAMIMAT0005308Pja2mRNA192256Prediction0.1828
Pja2RAID03959118rno-miR-494-3pmiRNAMIMAT0003193Pja2mRNA192256Prediction0.1828
Pja2RAID03981432rno-miR-455-5pmiRNAMIMAT0005316Pja2mRNA192256Prediction0.2202
Pja2RAID04040492rno-miR-465-5pmiRNAMIMAT0012850Pja2mRNA192256Prediction0.1828