DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Abtb1 | rno-let-7b | 268 | 292 | UUGGU-GUGU--UGGAUGAUGGAGU | ||| ||| ||||:|| |||| | -CCCAGCACCCUACCUGCUCCCUCC |
Abtb1 | rno-let-7e | 276 | 299 | UGAU--AUGUUGGAGGAUGGAGU | ||| |:| ||||||: ||| | CCUACCUGCUCCCUCCUGGCUCU |
Abtb1 | rno-let-7i | 269 | 292 | UGUCGUGUUU--GAUGAUGGAGU | |||||| ||:|| |||| | CCAGCACCCUACCUGCUCCCUCC |
Abtb1 | rno-miR-1* | 336 | 366 | -CCCA---UGUAU----UUCUUCAUACACG | ||| ||| |:|:|||:|||| | AGGGCUGGACAGGAAGUAGGGAGUGUGUGG |
Abtb1 | rno-miR-10a | 116 | 138 | GUGUUUAAGCCUAGA-UGUCCCAU | :||:| ||| || || |||| | GGCAGAGG-GGA-CUCACUGGGUU |
Abtb1 | rno-miR-125a | 110 | 147 | -GUGUCCAA-UUUCCCAGAG-----------UCCCU- | || || :|:||| ||| :|||| | ACAGUGGGCAGAGGGGACUCACUGGGUUCCUGGGGAC |
Abtb1 | rno-miR-125b | 185 | 229 | AGUGUUC-------------AAUCCCA--------GAGUCCCU | |||||| ||:||| |||||||| | GCACAAGGAAGCCCCAAGAUUUGGGGCAGGCACCACUCAGGGAA |
Abtb1 | rno-miR-126 | 83 | 113 | CGUAAUAAUGAG------------UGCCAUGCU | :||:|| ||: :|||||| | -UGUUGUU-CUUGCACGCUGGAUGGCGGUACA- |
Abtb1 | rno-miR-128a | 118 | 147 | -UUUUCUCUGG-----CCAAGUGACA-CU- | |:|:|:|||: ||||| ||| || | CAGAGGGGACUCACUGGGUUC-CUGGGGAC |
Abtb1 | rno-miR-128b | 119 | 147 | CUUUCUCUGG-----CCAAGUGACA-CU- | :|:|:|||: ||||| ||| || | AGAGGGGACUCACUGGGUUC-CUGGGGAC |
Abtb1 | rno-miR-133a | 92 | 130 | -UGU-CGACCAACU---------------UCCCCUGGUU | :|| ||||| ||: |||||||: | UGCACGCUGGAUGGCGGUACAGUGGGCAGAGGGGACUC- |
Abtb1 | rno-miR-133b | 96 | 130 | AUCGACCAACU---------------UCCCCUGGUU | ||||| ||: |||||||: | -CGCUGGAUGGCGGUACAGUGGGCAGAGGGGACUC- |
Abtb1 | rno-miR-145 | 120 | 158 | -UUCCCU---------AAGGACCCUUU---UGACCUG- | |:|||| ||||||||:| || |||: | GAGGGGACUCACUGGGUUCCUGGGGACCUCACAGGAUG |
Abtb1 | rno-miR-146 | 137 | 165 | UUGGGUACCUUAAGU------CAAGAGU- | ||: ||| ||| ||||||: | -UCCUGGGGACCUCACAGGAUGUUCUCGG |
Abtb1 | rno-miR-150 | 338 | 360 | GUGACCAUGUUCC-CAACCCUCU | :|||| |||:| || ||||| | GGCUGG-ACAGGAAGUAGGGAGU |
Abtb1 | rno-miR-17 | 276 | 322 | UGAUGGACGU-----GACAU--------UCG--------UGAAAC | |||||||| ||| ||| :||||| | CCUACCUGCUCCCUCCUGGCUCUUACCCAGCCCUGGCUUGCUUUGG |
Abtb1 | rno-miR-183 | 4 | 32 | GUCACUUAAGA---UGGUC---ACGGUAU- | || |||| :|||| ||||||: | --UUGCCUUCUGCGGCCAGGGCUGCCAUGG |
Abtb1 | rno-miR-184 | 273 | 293 | -UGGGAAUAGUCAAGAGGCAGGU | ||||| |||| ||| | CACCCUACCUG---CUCCCUCCU |
Abtb1 | rno-miR-187 | 20 | 44 | GCCGACG----UUGUGUUCUGUGCU | |||||| : ||| |:|||| | GGGCUGCCAUGGUGACA-GGCACGC |
Abtb1 | rno-miR-189 | 96 | 121 | -UGA-CUAUAGUCGAGUCAUCCGUG | :|| ||| |:|: ||||:|||| | CGCUGGAUGGCGGUACAGUGGGCAG |
Abtb1 | rno-miR-199a | 207 | 237 | -CUUGUCCAUC---AGA--CUUGUGACCC- | |::|||| || ||| |||||| | GGGGCAGGCACCACUCAGGGAAAACUGGGG |
Abtb1 | rno-miR-200a | 26 | 52 | UGUAGCAA----UG-GUCUGUCACAAU | ||| || :| |: ||||||| | CCAUGGUGACAGGCACGCACAGUGUG- |
Abtb1 | rno-miR-204 | 106 | 128 | UCCGUAUCCUACUGUUUCCCUU- | ||:| || |:||:||||:| | CGGUACAGUG-GGCAGAGGGGAC |
Abtb1 | rno-miR-20a | 276 | 301 | -GAUGGACGU--GAUAUUCGUGAAAU | |||||||| || :|| ||| | CCUACCUGCUCCCUCCUGGCUCUUA- |
Abtb1 | rno-miR-210 | 13 | 49 | AGUCGG---CGACAG----------UGUGCGUGUC- | |:||| |||| | :||||||||| | GCGGCCAGGGCUGCCAUGGUGACAGGCACGCACAGU |
Abtb1 | rno-miR-211 | 114 | 147 | -UCCGUUUCCUACUGUU-----------UCCCUU | :||||:|||: ||| :|||| | UGGGCAGAGGG-GACUCACUGGGUUCCUGGGGAC |
Abtb1 | rno-miR-214 | 4 | 27 | GACGGACAGACA-CGGA--CGACA | ||||| |||| ||| |||| | UUGCCU-UCUGCGGCCAGGGCUGC |
Abtb1 | rno-miR-22 | 80 | 108 | -UGU---CAAGAA-GU-UGACC-GUCGAA | || |||||| || :|||| ::|| | AACUGUUGUUCUUGCACGCUGGAUGGCG- |
Abtb1 | rno-miR-222 | 341 | 368 | CUCUGGG--UCAUCGGUC-UACAUCGA | :||| ||||| || :|||:|| | UGGACAGGAAGUAGGGAGUGUGUGGCA |
Abtb1 | rno-miR-24 | 134 | 174 | GACAAGGACGACU----UG---------------ACUCGGU | ||||||| || || |||||| | -GGUUCCUGGGGACCUCACAGGAUGUUCUCGGGAUGAGCCU |
Abtb1 | rno-miR-28 | 110 | 142 | GAGUUAUCUGAC-----------ACUCGAGGAA | ||:|:|:| | ||:|:|||| | -ACAGUGGGCAGAGGGGACUCACUGGGUUCCUG |
Abtb1 | rno-miR-292-3p | 217 | 241 | UGUGAGUUUUG---GACCGCCGUGAA | ||||||::: |||| ||:|| | CCACUCAGGGAAAACUGG-GGUACA- |
Abtb1 | rno-miR-292-5p | 187 | 211 | -GUUUUCUCGGGGGUC-AAACUCA | |||:: |||||| || ||||:| | ACAAGGAAGCCCCAAGAUUUGGGG |
Abtb1 | rno-miR-296 | 109 | 142 | -UGUC-CUAA-CUCCCC-------CCC-GGGA- | |||| |: |||||| ||| :||| | UACAGUGGGCAGAGGGGACUCACUGGGUUCCUG |
Abtb1 | rno-miR-298 | 152 | 188 | -CCU--------UCUUGUCG--GGAGGAG---ACGG | ||| :|| ||| ||||||| ||| | AGGAUGUUCUCGGGAUGAGCCUCCUCCUCCAGUGCA |
Abtb1 | rno-miR-301 | 96 | 124 | UACGAA--ACUGUUAUGAUAA-CGUGAC- | ||| ||:|::||| :| ||| | | -CGCUGGAUGGCGGUACAGUGGGCAGAGG |
Abtb1 | rno-miR-324-3p | 103 | 125 | GGUCGUCGUGGACCCCGUCACC- | :||:|:|| |||||| || | -UGGCGGUACAGUGGGCAGAGGG |
Abtb1 | rno-miR-324-5p | 184 | 217 | -UGUGG--UUACGGGAU------CCCCUA-CGC | :||| :| |||| |||| || | UGCACAAGGAAGCCCCAAGAUUUGGGGCAGGCA |
Abtb1 | rno-miR-327 | 273 | 296 | -UGGGAGU-ACG-GGGAGUUCC- | ||||| ||| ||||| || | CACCCUACCUGCUCCCUCCUGGC |
Abtb1 | rno-miR-330 | 294 | 322 | AGAGAC---GUCCGGGAC---ACGAAACG | |||| || |||||| ||||||| | GCUCUUACCCA-GCCCUGGCUUGCUUUGG |
Abtb1 | rno-miR-331 | 203 | 239 | AAGAUCCUAUCCG-GGU-------------CCCCG- | |:|:||: |||| ||| ||||: | AUUUGGGGCAGGCACCACUCAGGGAAAACUGGGGUA |
Abtb1 | rno-miR-337 | 319 | 346 | UUUCCGUA----GUAUA--UCCUCGACUU- | ||| |||:| ||| ||||:| | --UGGCUAUUUCCAUGUACAGG-GCUGGAC |
Abtb1 | rno-miR-339 | 131 | 156 | -ACUCGAGGACCUCC----UGUCCCU | ||:|:||||||:| ||||| | CUGGGUUCCUGGGGACCUCACAGGA- |
Abtb1 | rno-miR-342 | 43 | 67 | CUGCC-CACGCUAAAGACACACUCU | || | |||:| | |||||| | | CACAGUGUGUGUG-UGUGUGUGUGU |
Abtb1 | rno-miR-343 | 336 | 360 | AGACCCGUGUG--CCU----CCCUCU | |||| : ||| ||||| | --AGGGCUGGACAGGAAGUAGGGAGU |
Abtb1 | rno-miR-345 | 336 | 365 | -CGUGACCUG------AUCCC-CAGUCGU | | :|||||| ||||| || |: | AGGGCUGGACAGGAAGUAGGGAGUGUGUG |
Abtb1 | rno-miR-346 | 206 | 229 | UCUCCGUCCG---UGAGUCCGUCUGU | |:||||||| ||||||| | | UGGGGCAGGCACCACUCAGGGAA--- |
Abtb1 | rno-miR-34a | 12 | 48 | UUGUUGG--UCGAU----------UCUGUGACG-GU- | :|::|| :|||: ||:||| || || | UGCGGCCAGGGCUGCCAUGGUGACAGGCAC-GCACAG |
Abtb1 | rno-miR-351 | 122 | 147 | GUCC-GAGUUUCCCGAGGAGUCCCU- | :|| |||| |||:|||| :|||| | GGGGACUCACUGGGUUCCU-GGGGAC |
Abtb1 | rno-miR-370 | 129 | 156 | UUGGUCCAAGG-----UGGGGUCGUCCG | ||::|||||| |||:|| |||| | CACUGGGUUCCUGGGGACCUCA-CAGGA |
Abtb1 | rno-miR-378 | 332 | 360 | UGUGUCCUGGA----CCU-CAGUCCUC- | :|||||:|: ||| || :|||| | GUACAGGGCUGGACAGGAAGUAGGGAGU |
Abtb1 | rno-miR-412 | 12 | 39 | -UGCCGAUCACC--UGGU-CCACU-UCA | :|||| || || :||| ||||| || | UGCGGCCAG-GGCUGCCAUGGUGACAGG |
Abtb1 | rno-miR-483 | 333 | 362 | -UGUUCUGCCCUCCCCU-----CCUCACU | |||:|:| ||| ||| |||||| | UACAGGGCUGGACAGGAAGUAGGGAGUGU |
Abtb1 | rno-miR-493 | 230 | 253 | -GACCGUGUGUCAUCUGGAAGU- | |||| :|||||||:|:|| | | ACUGGGGUACAGUAGGCUUUGAA |
Abtb1 | rno-miR-503 | 72 | 102 | GUCAUG---------ACAAGGGCGA-CGAU- | ||:| ||||| || |||: | -UGUGCAGCAACUGUUGUUCUUGCACGCUGG |
Abtb1 | rno-let-7b | 270 | 291 | uUGGUGUGUUGGAUGAUGGAGu | | ||| | ||||:|| |||| | cAGCACCCTACCTGCTCCCTCc |
Abtb1 | rno-let-7e | 264 | 284 | ugauauGUUGGAGGAUGGAgu | ||:| ||||||| | ctccccCAGCACCCTACCTgc |
Abtb1 | rno-miR-1* | 338 | 365 | CC--CAUGUAUUU----CUUCAUACACg | || | ||| :|| |:|||:|||| | GGCTGGACAGGAAGTAGGGAGTGTGTGg |
Abtb1 | rno-miR-10a | 129 | 157 | GUG-UUUAAG----CCUAGA-UGUCCCAu | ||| :::||| ||| || ||||| | | CACTGGGTTCCTGGGGACCTCACAGGATg |
Abtb1 | rno-miR-125a | 197 | 227 | GUGUCC--AAUUUC--CC----AGAGUCCCU | | || | ||:::| || |||||||| | CCCAAGATTTGGGGCAGGCACCACTCAGGGA |
Abtb1 | rno-miR-125a | 111 | 136 | GU-GUCCAAUUUCCCAGAGU--CCCu | || ::|| :|:||| |||| ||| | CAGTGGGCAGAGGGGACTCACTGGGt |
Abtb1 | rno-miR-125b | 196 | 227 | aGUGUUC--AAUCCC--------AGAGUCCCU | | |||| ||:||| |||||||| | cCCCAAGATTTGGGGCAGGCACCACTCAGGGA |
Abtb1 | rno-miR-126 | 93 | 113 | CGUAAUAAUGAGUGCCAUGcu | ||| | : | :|||||| | GCACGCTGGATGGCGGTACag |
Abtb1 | rno-miR-128a | 119 | 136 | UUUUCUCUGGCCAAGUGACACu | |:|:|:||| |||||| | | AGAGGGGAC----TCACTGGGt |
Abtb1 | rno-miR-128b | 116 | 136 | CUUUCUCUGGCC-AAGUGACACu | |: ||||: || |||||| | | GGCAGAGG--GGACTCACTGGGt |
Abtb1 | rno-miR-133a | 128 | 149 | uGUCGACCAACUUCCCCUGGuu | || : |||| ||||||| | tCACTGGGTTCCTGGGGACCtc |
Abtb1 | rno-miR-133b | 128 | 149 | aucGA-CCAACUUCCCCUGGuu | || |||| ||||||| | tcaCTGGGTTCCTGGGGACCtc |
Abtb1 | rno-miR-145 | 130 | 156 | uucCCUAAGGACCCUU---UUGACCUg | ||:||||||||:| || ||| | actGGGTTCCTGGGGACCTCACAGGAt |
Abtb1 | rno-miR-146 | 144 | 163 | uUGG-GUACCUUAAGUCAAGAGu | ||| || |:|| |||||| | gACCTCACAGGAT---GTTCTCg |
Abtb1 | rno-miR-183 | 2 | 30 | gucACUUAAGA---UGGU--C-ACGGUAu | || |||| :||| | |||||| | cctTGCCTTCTGCGGCCAGGGCTGCCATg |
Abtb1 | rno-miR-184 | 274 | 292 | UGGGAAUAGUCAAGAGGCAGGu | |||| || | | |||| ||| | ACCC-TACCTG--CTCCCTCCt |
Abtb1 | rno-miR-189 | 97 | 120 | uGA-CUAUAGUCGAGUCAUCCGUg | || |||: |:|: ||||:|||| | gCTGGATGGCGGTACAGTGGGCAg |
Abtb1 | rno-miR-199a | 208 | 235 | CUUGUCC---AUCAG--ACUUGUGACCC | |::|||| | || ||| |||||| | GGGCAGGCACCACTCAGGGAAAACTGGG |
Abtb1 | rno-miR-200a | 26 | 52 | uGUAGCAAUG---GU-C-UGUCACAau | ||| || || || | ||||||| | cCATGGTGACAGGCACGCACAGTGTgt |
Abtb1 | rno-miR-20a | 277 | 301 | GAUGGAC--GUGAUAUUCGUGAAau | ||||||| | || :|| ||| | CTACCTGCTCCCTCCTGGCTCTTac |
Abtb1 | rno-miR-210 | 22 | 47 | aGUCGG--CGACAGU--GUGCGUGUC | | ||| | || || ||||||||| | gCTGCCATGGTGACAGGCACGCACAG |
Abtb1 | rno-miR-211 | 106 | 126 | uCCGUUUCCUACUGUUUCCCUU | ||:| || : |:||:||||:| | cGGTACAGTG-GGCAGAGGGGA |
Abtb1 | rno-miR-214 | 1 | 14 | gaCGGACAGACACGGACGACa | |||| ||||| ||| | --GCCT-----TGCCTTCTGc |
Abtb1 | rno-miR-218 | 26 | 47 | uGUACCAAUCU-AGUUCGUGUu | |||||| | | || ||||| | cCATGGTGACAGGCACGCACAg |
Abtb1 | rno-miR-22 | 102 | 123 | UGUCAAGAAGUUGACCGUCgaa | |::| | ||:: ||||| | ATGGCGGTACAGTGGGCAGagg |
Abtb1 | rno-miR-222 | 343 | 367 | CUCUGGGUCAUCGGUC-UACAUCGa | || | ||||| || :|||:|| | GACAGGAAGTAGGGAGTGTGTGGCa |
Abtb1 | rno-miR-24 | 155 | 173 | gACAAGGACGACUUGACUCGGu | |||||: | || |||||| | aTGTTCTCG-GGA--TGAGCCt |
Abtb1 | rno-miR-28 | 118 | 141 | gagUUAUCUGA--CACUCGAGGAa | |: :|||| ||:|:|||| | cagAGGGGACTCACTGGGTTCCTg |
Abtb1 | rno-miR-292-3p | 194 | 219 | uguGAGUUUUGGA--CCG-CCGUGaa | | |||:|::| ||| ||||| | agcCCCAAGATTTGGGGCAGGCACca |
Abtb1 | rno-miR-292-5p | 188 | 210 | GUUUUCUCGGGGGUC-AAACUCa | |||:: |||||| || ||||:| | CAAGGAAGCCCCAAGATTTGGGg |
Abtb1 | rno-miR-296 | 121 | 148 | UGUCCUAACU--CCC-----CCCCGGGA | | :||| | | ||| |||| ||| | AGGGGACTCACTGGGTTCCTGGGGACCT |
Abtb1 | rno-miR-298 | 164 | 187 | CCUUCUUGUCGGGAGGAG---ACGg | ||| ||:| :||||||| ||| | GGATGAGC-CTCCTCCTCCAGTGCa |
Abtb1 | rno-miR-301 | 73 | 98 | uACGAAACUG-UUAUGAUAACGUGac | ||| || : |::| |||||| | gTGCAGCAACTGTTGTTCTTGCACgc |
Abtb1 | rno-miR-324-3p | 102 | 123 | gguCGUCGUGGACCCCGUCACC | ||:|:|| |||||| || | atgGCGGTACAGTGGGCAGAGG |
Abtb1 | rno-miR-324-5p | 177 | 197 | uGUGGUUACGGGAUCCCCUACGc | | |||:||| | | ||| || | cCTCCAGTGCACAA--GGAAGCc |
Abtb1 | rno-miR-327 | 274 | 294 | UGGGA-GUACG-GGGAGUUCC | ||||| | ||| ||||| || | ACCCTACCTGCTCCCTCCTGG |
Abtb1 | rno-miR-330 | 296 | 321 | AGAGACGUCCGGGAC---ACGAAACg | |||: | |||||| ||||||| | TCTTACCCAGCCCTGGCTTGCTTTGg |
Abtb1 | rno-miR-337 | 317 | 344 | uuuCCG-UA---GUAUAU-CCUCGACUU | ||| || |||:|| |:||||:| | tttGGCTATTTCCATGTACAGGGCTGGA |
Abtb1 | rno-miR-339 | 132 | 156 | ACUCGAGGACCUC----CUGUCCcu | ||:|:||||||:| ||||| | TGGGTTCCTGGGGACCTCACAGGat |
Abtb1 | rno-miR-343 | 334 | 359 | aGACCCG---UGUGC--C-UCCCUCu | | |||| ||| | | |||||| | aCAGGGCTGGACAGGAAGTAGGGAGt |
Abtb1 | rno-miR-345 | 332 | 349 | CGUGACCUGAUCCCCAGUCgu | |:|| ||:|| || ||| | GTACAGGGCT---GGACAGga |
Abtb1 | rno-miR-346 | 188 | 216 | ucUCCGUCCGUG------AGUCCGUCUGU | ||| || | | | :|||||:|| | caAGGAAGCCCCAAGATTTGGGGCAGGCA |
Abtb1 | rno-miR-349 | 321 | 342 | ucuccaauucugucGUCCCGAC | |||||||| | gctatttccatgtaCAGGGCTG |
Abtb1 | rno-miR-34a | 8 | 28 | uuguugGUCGAUUCUGUGACGGU | |:|| |:| :|||||| | cttctgCGGCCAGG--GCTGCCA |
Abtb1 | rno-miR-351 | 200 | 227 | gUCCGAGUUUC--CCGAG--GAGUCCCU | || :|::::| ||| | |||||||| | aAGATTTGGGGCAGGCACCACTCAGGGA |
Abtb1 | rno-miR-351 | 141 | 167 | guCC--GAGUUUCCCG-AGGAGUCCcu | || |||| ||| : |:|||:|| | ggGGACCTCACAGGATGTTCTCGGGat |
Abtb1 | rno-miR-351 | 111 | 136 | GUC-CGAGUUUCCCGAGGAGU--CCCu | ||| | ||:|||| |||| ||| | CAGTGGGCAGAGGG-GACTCACTGGGt |
Abtb1 | rno-miR-412 | 13 | 38 | uGCCGAUCACC--UGGU-CCACU-UCa | |||| || || :||| ||||| || | gCGGCCAG-GGCTGCCATGGTGACAGg |
Abtb1 | rno-miR-483 | 339 | 361 | uGUUCUGCCCUCCCCUCCUCACu | | :||| ||| | :|||||| | gCTGGACAGGAAGTAGGGAGTGt |
Abtb1 | rno-miR-493 | 231 | 251 | GACCGUGUGUCAUCUGGAAgu | |||| ::|||||||:|:|| | CTGGGGTACAGTAGGCTTTga |
Abtb1 | rno-miR-503 | 76 | 103 | GUC-AUGACAA-------GGGCGACgau | ||| |||||| | ||||| | CAGCAACTGTTGTTCTTGCACGCTGgat |
Abtb1 | rno-miR-125a | 220 | 227 | -GUGU-CCAAUU----------UCCCA--------GAGUCCCU | |||| || :||| |||||||| | GCACAAGGAAGCCCCAAGAUUUGGGGCAGGCACCACUCAGGGAA |
Abtb1 | rno-miR-125b | 220 | 227 | AGUGUUC-------------AAUCCCA--------GAGUCCCU | |||||| ||:||| |||||||| | GCACAAGGAAGCCCCAAGAUUUGGGGCAGGCACCACUCAGGGAA |
Abtb1 | rno-miR-210 | 40 | 47 | A--------GUCGG---CGACAG----------UGUGCGUGUC | |:||| |||| | :||||||||| | UGCCUUCUGCGGCCAGGGCUGCCAUGGUGACAGGCACGCACAGU |
Abtb1 | rno-miR-330 | 314 | 321 | A---------------GAGAC---GUCCGGGAC---ACGAAACG | |||| ||| ||||| ||||||| | ACCUGCUCCCUCCUGGCUCUUACCCAG-CCCUGGCUUGCUUUGG |
Abtb1 | rno-miR-349 | 335 | 342 | UCUCCAAUUCUGUC---------------------GUCCCGAC | |||||||| | ACCCAGCCCUGGCUUGCUUUGGCUAUUUCCAUGUACAGGGCUGG |
Abtb1 | rno-miR-351 | 220 | 227 | G---------------UCCGAGUUUC--CCGAG--GAGUCCCU | || | ::| ||| |||||||| | GCACAAGGAAGCCCCAAGAUUUGGGGCAGGCACCACUCAGGGAA |