DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ubr2 rno-let-7a 31 52 -UUGAUAUGUUGGAUGAUGGAGU |:||: || :||| ||:|||| GAGCUGGAC-GCCU-CUGCCUCU Ubr2 rno-let-7b 23 52 -UUGGUGUGUUGGAU------GAUGGAGU :||||:| |:|: ||:|||| AGACCAUAGAGCUGGACGCCUCUGCCUCU Ubr2 rno-let-7c 23 52 -UUGGUAUGUUGGAU------GAUGGAGU :|||||| |:|: ||:|||| AGACCAUAGAGCUGGACGCCUCUGCCUCU Ubr2 rno-let-7d 32 53 -UGAUACGUUGGAUGAUGGAGA- :||: :||| ||:||||| AGCUGGAC-GCCU-CUGCCUCUG Ubr2 rno-let-7e 32 52 -UGAUAUGUUGGAGGAUGGAGU :||: || :|||| |:|||| AGCUGGAC-GCCUC-UGCCUCU Ubr2 rno-let-7f 31 52 -UUGAUAUGUUAGAUGAUGGAGU |:||: ||: || ||:|||| GAGCUGGACGC-CU-CUGCCUCU Ubr2 rno-miR-101a 214 237 GAAGUCAAUAGUGU-CAUGACAU ||||| :||| ||:|||| GUUCAGAGGUCAACUGUGCUGUC Ubr2 rno-miR-101b 214 237 GAAGUCGAUAGUGU-CAUGACAU ||||| :||| ||:|||| GUUCAGAGGUCAACUGUGCUGUC Ubr2 rno-miR-103 597 629 AGUAU-CGGGACA-------UGUUACGACGA- || ||: | |||:||||||| CCAGAUGCUAAGGAAAGGAGACAGUGCUGCUG Ubr2 rno-miR-107 599 629 ACUAUCGGGACA-------UGUUACGACGA- ||| ||: | |||:||||||| AGAU-GCUAAGGAAAGGAGACAGUGCUGCUG Ubr2 rno-miR-10a 741 775 GUGUU-UAAGCCUA---GAUGU--------CCCAU |||| :||:||| |||| ||| AACAACGUUUGGAACAGCUACUUACAAGGUGGGA- Ubr2 rno-miR-122a 322 352 -UGUU--------UGUGGUAACAGUGUGAGGU- :||: ||:|||| |||:| ||| GGCAGCUGUGGGCACGCCAUG--CACGC-CCAU Ubr2 rno-miR-125a 904 929 GUGUCCAAUUUCC---CAGAGUCCCU :||| |::| |||||||| UGCAGACUGGACGACUGUCUCAGGU- Ubr2 rno-miR-127 84 111 UCGGUUCGAGUCUG------CCUAGGCU- || :|||| ||| ||:||||: CGC--GGCUCUGACAGCAUUGGGUCCGGC Ubr2 rno-miR-128a 161 186 -UUUUCUCUGG---CCAAGUGACACU- ::|:||| | || ||||||||: AGGAGGAG-CAGGAGG-UCACUGUGGA Ubr2 rno-miR-128b 161 186 -CUUUCUCUGG---CCAAGUGACACU- |:|:||| | || ||||||||: AGGAGGAG-CAGGAGG-UCACUGUGGA Ubr2 rno-miR-133a 753 780 -UGUCGACCAAC--UUC-CCCUGGUU- |||||| |:| |||||:|| AACAGCUACUUACAAGGUGGGACUAAA Ubr2 rno-miR-133b 820 833 AUCGACCAACUUCCCCUGGUU ||| :||||||| -UGCU------GGGGGACCU- Ubr2 rno-miR-134 68 89 -GGGAGACCAGUUGGUCAGUGU- |||||||||: |||| |:|: GCCCUCUGGUU--CCAGACGCGG Ubr2 rno-miR-135a 863 886 -AGUGUA--UCCUUAUUUUUCGGUAU || | ||||: :||||||| UUCUGAGUGAGGAG-GAAAAGCCC-- Ubr2 rno-miR-135b 864 886 -GUGUA--UCCUUACUUUUCGGUAU | | ||||: |||||||| UCUGAGUGAGGAG-GAAAAGCCC-- Ubr2 rno-miR-138 313 326 CUAAGUGUUGUGGUCGA ||| ||||::|| ---ACAC-ACACUGGCA Ubr2 rno-miR-144 136 160 GAUCAUGUAGU--AGAUAUGACAU- ||| :||| | ||||||||: -CAGUUUGUCACCUGUAUACUGUGU Ubr2 rno-miR-145 1112 1138 UUCCCUAAGGACCCU--UUUGACCUG- |||| ||| || |: |||||| -UGGGACUCCAGGCACUAGCCUGGACU Ubr2 rno-miR-148b 439 477 -UGU--UUCA------------AGACACU-ACGUGACU- ||: :||| ||||||| ||| |||| AACGGCGAGUUCCUCUGCCCGCUCUGUGAGUGC-CUGAG Ubr2 rno-miR-150 758 776 -GUGACCAUGUUCCCAACCCUCU :||| ||||||| ||||| CUACU--UACAAGG--UGGGAC- Ubr2 rno-miR-152 455 477 -GGGUUCAAGACAG-UACGUGACU- |||: ||||| :||| |||| GCCCGC--UCUGUGAGUGC-CUGAG Ubr2 rno-miR-15b 462 502 -ACAUU-------------UGGUACUAC----ACGACGAU |||:| |||:|||| ||||||| CUGUGAGUGCCUGAGCAACACCGUGAUCCCCCUGCUGCUU Ubr2 rno-miR-16 601 630 -GCGGUUAUAAA----UG-CACGACGAU- :||:|| || ||||||||: AUGCUAAGGAAAGGAGACAGUGCUGCUGA Ubr2 rno-miR-183 440 474 -GUCACUUA---AGAUGG---------UCACGGUAU |:| ||:| |||:|| |||||| ACGGCGAGUUCCUCUGCCCGCUCUGUGAGUGCCU-- Ubr2 rno-miR-184 881 905 -UGGGAAU-AGUCAAGAGGCAGGU :||| ||:| |||:| || AGCCCGUGUUCGGACCUCUGCCCU Ubr2 rno-miR-189 318 338 -UGACUAUAGUCGAGUCAUCCGUG- |||| ||||| ||:||||| CACUGG---CAGCU--GUGGGCACG Ubr2 rno-miR-192 203 227 -CCGA--CAGUUAAGUAUCCAGUC ||| ||: :|||| |||||| UGGCAGCGUUUGUUCAGAGGUCAA Ubr2 rno-miR-195 602 630 -CGGUUAUAAAGA-----CACGACGAU- ||:|| ||||||||: UGCUAAGGAAAGGAGACAGUGCUGCUGA Ubr2 rno-miR-196a 738 766 -GGUUGUUGU--ACUU---UGAUGGAU- |:||||||: ||:| :||||:|| GCUAACAACGUUUGGAACAGCUACUUAC Ubr2 rno-miR-196b 738 766 -GGUUGUUGU---CCUU--UGAUGGAU- |:||||||: |||| :||||:|| GCUAACAACGUUUGGAACAGCUACUUAC Ubr2 rno-miR-199a 165 186 -CUUGUCCAUCAGACUUGUGACCC ||:|||| :||| || ||| GGAGCAGGAGGUC---ACUGUGGA Ubr2 rno-miR-207 161 191 UUCCCUCCUCUCGGUCCUCU-----------UCG- ||||||| ||||||: ||| --AGGAGGAG---CAGGAGGUCACUGUGGAAAGCA Ubr2 rno-miR-20b 318 338 -UGGACGU-GAUACUCGUGAAAC ||: ||| ||:||:|||| CACUGGCAGCUGUGGGCACG--- Ubr2 rno-miR-212 899 923 CCGGCA---CUGACCU-CUGACAAU ||| ||||||| |||||| UGCCCUGCAGACUGGACGACUGUC- Ubr2 rno-miR-214 452 476 -GACGG-----ACAGACACGGACGACA ||||| ||| ||||||| UCUGCCCGCUCUGUGAGUGCCUGA--- Ubr2 rno-miR-218 93 116 -UGUACCAAUCUAGUUCGUGUU- ||| ||:|:|| :|||||: GACAGCAUUGGGUCCGGCACAGA Ubr2 rno-miR-22 315 330 UGUCAAGAAGU-UGACCGUCGAA || |||||||||| --------ACACACUGGCAGCUG Ubr2 rno-miR-26a 1122 1143 -CG-GAUAGGACCU-AAUGAACUU || ||| |||||| ||:|| GGCACUAGCCUGGACUUGCUG--- Ubr2 rno-miR-27a 164 187 CGCCUUGAA--UCGGUGACACUU- |||:| :|:|||||||:| -AGGAGCAGGAGGUCACUGUGGAA Ubr2 rno-miR-27b 167 187 -CGUCUUGAAUCGGUGACACUU- ||||:| :|:|||||||:| AGCAGGA---GGUCACUGUGGAA Ubr2 rno-miR-292-3p 87 114 UGUGAGUU--UUG-GACC---GCCGUGAA :||| |:| :||| |||||| -GGCUCUGACAGCAUUGGGUCCGGCACA- Ubr2 rno-miR-292-5p 117 144 -GUUUU----CUCGGGG--GUCAAACUCA ||:: |||||| ||||||| ACAGGUCCCUGAGCCCAGACAGUUUGU-- Ubr2 rno-miR-298 872 904 -CCUUCUUGUCGGGA--------GGAGACGG- |||:||| ||||| |||||||| AGGAGGAAAAGCCCGUGUUCGGACCUCUGCCC Ubr2 rno-miR-30b 1076 1098 UCGACUCACAUCCUACAAAUGU | ||:|||| ||||:| UGGUGGGUGUUCACGGUUUGCU Ubr2 rno-miR-30d 1065 1092 GAAGGU---CAGCC-CCUACAAAUGU- ||:|| | :|| ||:|||| ||: GUUUCAUUUGCUGGUGGGUGUUCACGG Ubr2 rno-miR-31 31 56 GUCGAUA--CGGU--CGUAGAACGGA ||||: ||| || || |||| GAGCUGGACGCCUCUGCCUC-UGCCG Ubr2 rno-miR-320 50 71 AAGCGG-GAGAGUUGG-GUCGAAAA :||| |||||:|| |||| -CUGCCGCUCUCGACAACAGCC--- Ubr2 rno-miR-324-3p 943 966 GGUCGUCGUG-GACCCCGUCACC- ||||||||| :||| |||||| GCAGCAGCACAUUGGA-CAGUGGC Ubr2 rno-miR-324-5p 809 838 -UGUGGU--UACGGGAUCCCCU----ACGC || ||| |||: ||:||||| ||| UAC-CCAUCAUGUGCUGGGGGACCUGUGCA Ubr2 rno-miR-326 820 853 -UGACCUCCUU--CCCG---------GGUCUCC :||||:||| | || |||||| UGCUGGGGGACCUGUGCAUACACUAUCCAGAGC Ubr2 rno-miR-333 321 343 UUUUCAUUGA---UCGUGUGGUG- :| |:|| :||||:|||: --UGGCAGCUGUGGGCACGCCAUG Ubr2 rno-miR-337 155 175 UUUCCGUAGUAUAUCCUCGACUU- |::||| |||||| |:| ---UGUGUCAGG-AGGAGCAGGAG Ubr2 rno-miR-338 1057 1080 -AGUUGUUUU-AGUGACUACGACCU ||:||| |||:| |||||| AUCGACAUGUUUCAUU--UGCUGGU Ubr2 rno-miR-339 125 177 -ACUCGA--------------GGA-------------CCUCCU GUCC CU ||||| ||| |||||| |||| |: CUGAGCCCAGACAGUUUGUCACCUGUAUACUGUGUCAGGAGGAGCAGGAGGU Ubr2 rno-miR-341 225 252 -UGAC-UGGCUGG---CUGGCUAGCU- |||| :|:| | ||| |||||| AACUGUGCUGUCAAAAGACAGAUCGAA Ubr2 rno-miR-342 429 470 -CUGCCCA------CGCUAA---AGAC-------ACACUCU ||:| |||| |||| |||||| CGAUGUAGAGAACGGCGAGUUCCUCUGCCCGCUCUGUGAGU Ubr2 rno-miR-346 161 197 -UCUCCG-----UCC-GUGAGUC----CGUCU-GU- :|||| ||| |||| | ||||| || AGGAGGAGCAGGAGGUCACUGUGGAAAGCAGAGCAA Ubr2 rno-miR-349 386 413 -UCUCCAA--UUCUGUCGUCCC-GAC- :||| |||:|||||| | ||| AGGAGCAGCGAAGGCAGCAGCGACUGC Ubr2 rno-miR-34a 316 342 UUGU--UGGUCGAU-UCUGUGACGGU- ||| : |||||: :|:||| |||| CACACUGGCAGCUGUGGGCAC-GCCAU Ubr2 rno-miR-351 1079 1118 GUCCG--AGUUUC-------CCG-AGGAGU----CCCU- :||: ||| :| ||| ||||| |||| UGGGUGUUCACGGUUUGCUUGGCAUCCUCUUCAUGGGAC Ubr2 rno-miR-363-5p 475 495 UUUAACGUA---GCACUAGGUGGGC ||| |||||||| ||| ----AGCAACACCGUGAUCC-CCCU Ubr2 rno-miR-370 505 527 UUGGUCCAAGGUGGG-GUCGUCCG ||||| ||:|| ||||||| -CCCAGGAG-CAUCCUCAGCAGGA Ubr2 rno-miR-378 114 167 -UGUGUCCU-GGAC--------------CU---------- CAGUCCUC ||||||| |||| | |||||||| GACACAGGUCCCUGAGCCCAGACAGUUUGUCACCUGUAUACUGUGUCAGGAGG Ubr2 rno-miR-409-5p 819 834 GUUUCAACGAGCCCAUUGGA- |||| ||| :|||| -----GUGCUGGGG-GACCUG Ubr2 rno-miR-422b 1105 1131 CGGAAGA---CUGAGGUUCA-GGUCA :|||| |||||||:| |:|| CUCUUCAUGGGACUCCAGGCACUAGC Ubr2 rno-miR-424 595 630 -AGGUUU-UGUA--CUUA--------ACGACGAC- ||||:| :| ||| |||||||| AUCCAGAUGCUAAGGAAAGGAGACAGUGCUGCUGA Ubr2 rno-miR-431 1015 1040 -ACG---UACUGCCG-GACGUUCUGU ||| :||||||| ||| ||||| GUGCCUAGUGACGGCUCUG-AAGACC Ubr2 rno-miR-449 323 342 UGGUCGAUUGUUAUGUGACGGU- |||||: : :||| |||| -GCAGCUGUGG--GCAC-GCCAU Ubr2 rno-miR-451 1073 1096 UUGAGUCAUUACCAU---UGCCAAA- :|| :||: |||: ||||||| UGCU-GGUG--GGUGUUCACGGUUUG Ubr2 rno-miR-483 159 186 UGUUCUGCCCUCC-CCUCCU----CACU- ||:|| |||| ||||| |||: UCAGGA--GGAGCAGGAGGUCACUGUGGA Ubr2 rno-miR-485 1079 1100 -CUUAAGUAGUGCCGGUCGGAGA | | ||||||: ||:| UGGGUGU-UCACGGUUUGCUUG- Ubr2 rno-miR-493 552 569 -GACCGUGUGUCAUCUGGAAGU ||||| |||||:|||| UCUGGC--ACAGUGGACCA--- Ubr2 rno-miR-494 1039 1072 UCCAAAGGGCACAU---------------ACAAAGU- ||||||| | ||||||| ----CUCCCGUGCAUAUUAGACAUCGACAUGUUUCAU Ubr2 rno-miR-501 576 594 AAAGUGGGUCC-CUGUUUCCUAA :||||| ||:||||| ---AGCCCAGCAGAUAAAGGU-- Ubr2 rno-miR-503 466 500 GUCAUG-------------ACAAGGGCGACGAU- |||:| || |||| |||||: GAGUGCCUGAGCAACACCGUGAUCCCCCUGCUGC Ubr2 rno-miR-540 874 906 GGUCCU-----------AG-CUGGAGACUGGA- |||| || |||||||| ||| -GAGGAAAAGCCCGUGUUCGGACCUCUGCCCUG Ubr2 rno-miR-541 100 128 -ACACUGGUUGUAGUCU-----UAGGGAA || | ||::|| |||| :||||| UUGGGUCCGGCA-CAGACACAGGUCCCUG Ubr2 rno-miR-542-3p 214 239 -AAGUCAAUAGUUA----GACAGUGU ||||| :|||| |||||| GUUCAGAGGUCAACUGUGCUGUCAA- Ubr2 rno-miR-542-5p 113 131 GCACUGUACUACUAGGGGCUC- |||| |:||||:||| --AGACACA--GGUCCCUGAGC Ubr2 rno-miR-9 753 783 AGUAUGUCGA-------UCUA--UUGGUUUCU- |||||| ||:| :||:||||: ---AACAGCUACUUACAAGGUGGGACUAAAGGU Ubr2 rno-miR-92 820 839 GUCCGG--CCCUGUUCACGUUAU ||: ||||| ||||| --UGCUGGGGGACCUGUGCAU-- Ubr2 rno-let-7a 32 51 UUGAUAUGUUGGAUGAUGGAGu |:||: || :||| ||:|||| AGCTGGAC-GCCT-CTGCCTCt Ubr2 rno-let-7b 32 51 UUGGUGUGUUGGAUGAUGGAGu |:|:: || :||| ||:|||| AGCTGGAC-GCCT-CTGCCTCt Ubr2 rno-let-7c 24 51 uUGGUAUGUUG------GAUGAUGGAGu |||||| |:| | ||:|||| gACCATAGAGCTGGACGCCTCTGCCTCt Ubr2 rno-let-7d 31 51 ugauACGU-UGGAUGAUGGAGA || | :||| ||:||||| gagcTGGACGCCT-CTGCCTCT Ubr2 rno-let-7e 33 51 uGAUAUGUUGGAGGAUGGAGu ||: || :||| ||:|||| gCTGGAC-GCCT-CTGCCTCt Ubr2 rno-let-7f 32 51 UUGAUAUGUUAGAUGAUGGAGu |:||: || : || ||:|||| AGCTGGAC-GCCT-CTGCCTCt Ubr2 rno-miR-103 605 627 aguaucgggacaUGUUACGACGA |||:||||||| taaggaaaggagACAGTGCTGCT Ubr2 rno-miR-107 605 627 acuaucgggacaUGUUACGACGA |||:||||||| taaggaaaggagACAGTGCTGCT Ubr2 rno-miR-122a 313 340 UGUUUGUG---GU-AACA-GUGUGAGGU ||| |||| || ||| :||| ||| ACACACACTGGCAGCTGTGGGCACGCCA Ubr2 rno-miR-125a 904 929 guGUCCAAUUUCC---CAGAGUCCcu ||| |::| | |||||||| tgCAGACTGGACGACTGTCTCAGGtc Ubr2 rno-miR-127 81 109 UCGGU-UCGAGUCUG------CCUAGGCu || |: :|||| ||| ||:|||| AGACGCGGCTCTGACAGCATTGGGTCCGg Ubr2 rno-miR-128a 162 184 uuUUCUCUGGC--CAAGUGACACu |:||| | | | |||||||| ggAGGAG-CAGGAGGTCACTGTGg Ubr2 rno-miR-128b 162 184 CUUUCUCUGGC--CAAGUGACACu |:|:||| | | | |||||||| GGAGGAG-CAGGAGGTCACTGTGg Ubr2 rno-miR-133a 754 778 UGUCGACCAA-CUUC--CCCUGGUU |||||| || ||| |||||:|| ACAGCTACTTACAAGGTGGGACTAA Ubr2 rno-miR-133b 814 833 aucgAC-CAACUUCCCCUGGuu || | || ||||||| atcaTGTGCTG--GGGGACCtg Ubr2 rno-miR-134 69 87 GGGAGACCAGUUGGUCAGUGu |||||||||: |||| |:| CCCTCTGGTT--CCAGACGCg Ubr2 rno-miR-135a 866 887 aguguaUCCUUAUUUUUCGGuau ||||: :||||||| tgagtgAGGAG-GAAAAGCCcgt Ubr2 rno-miR-135b 867 887 guguaUCCUUACUUUUCGGuau ||||: |||||||| gagtgAGGAG-GAAAAGCCcgt Ubr2 rno-miR-138 310 325 cuaaGUGUUGUGGUCGa ||| ||||::|| ggaaCAC-ACACTGGCa Ubr2 rno-miR-144 135 158 gaUCAUGUAGUAG--AUAUGACAu ||| ::||| | |||||||| acAGTTTGTCACCTGTATACTGTg Ubr2 rno-miR-145 1111 1136 UUCCCUAAGGACCCU--UUUGACCUG | |||| ||| || | |: |||||| ATGGGACTCCAGGCACTAGCCTGGAC Ubr2 rno-miR-148b 454 475 uguuuCAAGACACU-ACGUGACU | ||||||| ||| |||| tgcccGCTCTGTGAGTGC-CTGA Ubr2 rno-miR-150 759 776 gUGACCAUGUUCCCAACCCUcu ||| ||||||| ||||| tACT--TACAAGG--TGGGAct Ubr2 rno-miR-152 456 475 GGGUUCAAGACAGU-ACGUGACU ||| | ||||| | ||| |||| CCC--GCTCTGTGAGTGC-CTGA Ubr2 rno-miR-15b 475 501 aCAUU-UGGUACUA----CACGACGAu | || |||:|||| ||||||| aGCAACACCGTGATCCCCCTGCTGCTt Ubr2 rno-miR-15b 607 628 aCAUUUGGUACU-ACACGACGAu | ||| | || |||||||| aGGAAAGGA-GACAGTGCTGCTg Ubr2 rno-miR-16 480 501 GCGGUUAUAAAUGCACGACGAu | ||: || | ||||||| CACCGTGATCCCCCTGCTGCTt Ubr2 rno-miR-16 606 628 gcgguuauaaaUG-CACGACGAu || |||||||| aaggaaaggagACAGTGCTGCTg Ubr2 rno-miR-183 441 475 GUCACUUA---AGAUGG---------UCACGGuau |:| ||:| |||:|| |||||| CGGCGAGTTCCTCTGCCCGCTCTGTGAGTGCCtga Ubr2 rno-miR-184 882 904 uGGGAAU-AGUCAAGAGGCAGGu ||| |: ||:| |||:| || gCCCGTGTTCGGACCTCTGCCCt Ubr2 rno-miR-189 319 336 UGACUAUAGUCGAGUCAUCCGUG ||||: ||||| ||:||||| ACTGG---CAGCT--GTGGGCAC Ubr2 rno-miR-192 204 226 CCG--ACAGUUAAGUAUCCAGUc ||| ||: :|||| |||||| GGCAGCGTTTGTTCAGAGGTCAa Ubr2 rno-miR-195 608 628 cgguuauaaaGACACGACGAu | |||||||| ggaaaggagaCAGTGCTGCTg Ubr2 rno-miR-195 481 501 cGGUUAUAAAGACACGACGAu ||: || | ||||||| aCCGTGATCCCCCTGCTGCTt Ubr2 rno-miR-196a 739 764 GGUUGUUGUA---CU--UUGAUGGAU |:||||||:| || |:||||:|| CTAACAACGTTTGGAACAGCTACTTA Ubr2 rno-miR-196b 739 764 GGUUGUUGU---CCU--UUGAUGGAU |:||||||: ||| |:||||:|| CTAACAACGTTTGGAACAGCTACTTA Ubr2 rno-miR-199a 298 324 CUUGUC----CAUCAGACUUGUGACCc || | | ||:| ||||||| GATCTGTCCTGTGGAACACACACTGGc Ubr2 rno-miR-199a 166 183 CUUGUCCAUCAGACUUGUGACcc ||:|||| :|| ||||| GAGCAGGAGGT-----CACTGtg Ubr2 rno-miR-207 147 169 uucccuccuCUCGGUCCUCUUCG | |:||||||:||| ctgtatactGTGTCAGGAGGAGC Ubr2 rno-miR-20b 319 340 UGGACGU-GAUACUCGUGaaac ||: ||| ||:||:|||| ACTGGCAGCTGTGGGCACgcca Ubr2 rno-miR-210 323 351 aGUCGGCGACAGU-------GUGCGUGUc ||||:|: | || ||||| || gCAGCTGTGGGCACGCCATGCACGCCCAt Ubr2 rno-miR-212 899 923 cCGGCA---CUGACCU-CUGACAau ||| | ||||||| |||||| tGCCCTGCAGACTGGACGACTGTct Ubr2 rno-miR-214 468 499 gACGGAC------AGACAC-----GGACGACa |||||| | ||| ||||||| gTGCCTGAGCAACACCGTGATCCCCCTGCTGc Ubr2 rno-miR-218 94 114 UGUACCAAUCUAGUUCGUGUu ||| ||:|:|| :||||| ACAGCATTGGGTCCGGCACAg Ubr2 rno-miR-22 307 329 ugucaagaaGU-UGACCGUCGAa || |||||||||| tgtggaacaCACACTGGCAGCTg Ubr2 rno-miR-26a 1123 1141 CG-GAUAGGACCUAAUGAACuu || ||| ||||| ||||| GCACTAGCCTGG---ACTTGct Ubr2 rno-miR-27a 163 185 CGCCUUG--AAUCGGUGACACUU | |||:| :|:|||||||:| GAGGAGCAGGAGGTCACTGTGGA Ubr2 rno-miR-27b 168 185 CGUCUUGAAUCGGUGACACUU ||||:| :|:|||||||:| GCAGGA---GGTCACTGTGGA Ubr2 rno-miR-292-3p 88 114 uGUGAGUUUUG-GACC---GCCGUGaa | || | |:| :||| |||||| gCTCTGACAGCATTGGGTCCGGCACag Ubr2 rno-miR-292-5p 122 145 guuuuCUCGGG--GGUCAAACuca |||||| ||||||| tccctGAGCCCAGACAGTTTGtca Ubr2 rno-miR-298 873 902 CCUUCUUGUCGGG----A----GGAGACGG |||:||| ||||| | |||||||| GGAGGAAAAGCCCGTGTTCGGACCTCTGCC Ubr2 rno-miR-298 434 457 ccuUCUUGUCG--GGAGGAGACGG |||||:|| :||||||||| tagAGAACGGCGAGTTCCTCTGCC Ubr2 rno-miR-298 32 54 ccuuCUUGUCGGGA-GGAGACGG |:||: |:|| |||||||| agctGGACGCCTCTGCCTCTGCC Ubr2 rno-miR-30b 1073 1090 uCGACUCACAUCCUACAAAUGu |||| || ||:|||| || tGCTG---GT-GGGTGTTCACg Ubr2 rno-miR-320 48 73 aAG-CGG-GAGAGUUG-GGUCGaaaa || ||| |||||:|| |||| cTCTGCCGCTCTCGACAACAGCcctc Ubr2 rno-miR-324-5p 810 837 UGUGGU--UACGGGAUCCCCU----ACGc || ||| |||: ||:||||| ||| AC-CCATCATGTGCTGGGGGACCTGTGCa Ubr2 rno-miR-326 821 852 uGACCUCCU--UCCC---------GGGUCUCc ||||:||| | | :|||||| gCTGGGGGACCTGTGCATACACTATCCAGAGc Ubr2 rno-miR-333 319 341 uuuuCAUUGA---UCGUGUGGUg | |:|| :||||:||| actgGCAGCTGTGGGCACGCCAt Ubr2 rno-miR-337 152 173 uuucCGUAGUAUAUCCUCGACUU |::||| : |||||| |:| tactGTGTCA-GGAGGAGCAGGA Ubr2 rno-miR-338 1058 1079 AGUUGU-UUUAGUGACUACGACCu ||:||| : |||:| |||||| TCGACATGTTTCATT--TGCTGGt Ubr2 rno-miR-339 153 174 acuCGAGGACCUCCU-GUCCcu |: :| |||||| |||| actGTGTCAGGAGGAGCAGGag Ubr2 rno-miR-339 117 141 acUCGAGGACCUC----CUGUCccu || ||| ||| ||||| acAGGTCCCTGAGCCCAGACAGttt Ubr2 rno-miR-340 850 878 cCG-AUAUUUC-----AUUGACUCUGCCU || || |||| |:| ||||: ||| aGCATAGAAAGAATTCTGAGTGAGGAGGA Ubr2 rno-miR-341 226 250 UGAC-UGGCUG---GCUGGCUAGCU |||| :|:| | ||| |||||| ACTGTGCTGTCAAAAGACAGATCGA Ubr2 rno-miR-342 442 469 CUGCCCACG----CUAAAGACACACUCu |:|| || | | || |||||| GGCGAGTTCCTCTGCCCGCTCTGTGAGt Ubr2 rno-miR-346 190 211 UCUCCGU--CCGUGAGUCCGUCugu ||| ||| ||: ||: ||||| AGA-GCAATGGT-CTT-GGCAGcgt Ubr2 rno-miR-349 387 411 uCUC--CAAUUCUGUCGUC-CCGAC ||| | |||:|||||| | ||| gGAGCAGCGAAGGCAGCAGCGACTG Ubr2 rno-miR-34a 318 340 uUGUUGGUCGAU-UCUGUGACGGU || : |||||: :|:||| |||| cACTGGCAGCTGTGGGCAC-GCCA Ubr2 rno-miR-351 1087 1116 GU-CCGAGUUUCCC----GAGGAGU-CCCU || ||:|:: || |||:||| |||| CACGGTTTGCTTGGCATCCTCTTCATGGGA Ubr2 rno-miR-363-5p 474 495 uuuaacGUAGCACUAGGUGGGC || |||||||| ||:| gagcaaCACCGTGATCCCCCTG Ubr2 rno-miR-370 504 526 uuGGUCCAAGGUGGGGUCGUCCg ||||| | ||:||||||| tcCCAGGAGCATCCTCAGCAGGa Ubr2 rno-miR-378 133 165 UGUGUC---C--UGGAC------CUCAGUCCUC | |||| | ||||| | |||||||| AGACAGTTTGTCACCTGTATACTGTGTCAGGAG Ubr2 rno-miR-409-5p 814 832 guuucaACGAGCCCAUUGGA |||| ||| :|||| atcatgTGCT-GGGGGACCT Ubr2 rno-miR-422b 1100 1123 CGGAAGACUGAGGU----UCAGGUCa || | || ||:|| | ||||| GCATCCT--CTTCATGGGACTCCAGg Ubr2 rno-miR-424 606 628 agguUUUGUACU-UAACGACGAC ||| : || | |||||||| aaggAAAGGAGACAGTGCTGCTG Ubr2 rno-miR-424 475 501 agGUU-UUGUACU----UAACGACGAc ||| | |:||| ||||||| agCAACACCGTGATCCCCCTGCTGCTt Ubr2 rno-miR-431 1016 1039 ACG---UACUGCCG-GACGUUCUGu ||| :||||||| ||| ||||| TGCCTAGTGACGGCTCTG-AAGACc Ubr2 rno-miR-449 304 325 uGGUCGAUUGUUAUGUGACGGU || |: :| | |||||| || tCCTGTGGAACACACACTGGCA Ubr2 rno-miR-449 322 349 ugGUCGAU-----UGU--UAUGUGACGGu |||||: ||: ||:||| ||| ggCAGCTGTGGGCACGCCATGCAC-GCCc Ubr2 rno-miR-483 154 177 uguuCUGCCCUCC-CCUCCUCacu | | ||||| | ||||| ctgtGTCAGGAGGAGCAGGAGgtc Ubr2 rno-miR-485 1082 1108 CUUAAGU----AGUG--CCGGUCGGAGA | :|||| |::| || || ||||| GTGTTCACGGTTTGCTTGG-CATCCTCT Ubr2 rno-miR-493 553 571 GACCGUGUGUCAUCUGGaagu |||| ||||||:|||| CTGG--CACAGTGGACCagaa Ubr2 rno-miR-494 1035 1070 UCCAAAGGGCAC-----------A----UACAAAGU || ||||||| | |||||||| AGACCTCCCGTGCATATTAGACATCGACATGTTTCA Ubr2 rno-miR-497 607 628 augUUUGGUGUCACACGACGAC ||| | | ||||||||| aggAAAGGAGACAGTGCTGCTG Ubr2 rno-miR-497 475 501 auGUUUGGUGUCAC-------ACGACGAc ||| ||| ||| ||||||| agCAA--CACCGTGATCCCCCTGCTGCTt Ubr2 rno-miR-501 573 595 aaAGUGGGUC-CCUGUUUCCuaa | :||||| ||:||||| aaTAGCCCAGCAGATAAAGGtga Ubr2 rno-miR-501 591 617 aaAGUGGGUCCCUG-----UUUCCUaa | |:|||| :| |||||| ggTGATCCAGATGCTAAGGAAAGGAga Ubr2 rno-miR-503 482 501 GUCAUGACAAGGGCGACGAu | ||: | ||:|||||| CCGTGATCCCCCTGCTGCTt Ubr2 rno-miR-540 884 904 GGUCCUAG-CUGGAGACUGGA ||: | || |||||||| ||| CCGTGTTCGGACCTCTGCCCT Ubr2 rno-miR-541 101 127 ACACUGGUUGUAGUC-----UUAGGGAa || | ||::|| ||| ::||||| TGGGTCCGGCA-CAGACACAGGTCCCTg Ubr2 rno-miR-542-3p 215 239 AAGUCAAUAGUU---A-GACAGUgu ||||| :|||| | |||||| TTCAGAGGTCAACTGTGCTGTCAaa Ubr2 rno-miR-542-5p 107 129 GCACUGUACU---ACUAGGGGCUC || ||| || |:||||:||| CGGCACA-GACACAGGTCCCTGAG Ubr2 rno-miR-9 760 781 aGUAUG-UCGAUCUAUUGGUUUCu | ||| || |:| :||:|||| aCTTACAAGGTGG--GACTAAAGg Ubr2 rno-miR-92 822 840 GUCCGGCCCUGUUCACGUuau | || ||||| ||||| CTGG--GGGACCTGTGCAtac Ubr2 rno-miR-128a 177 184 --------------------UUUUCUCUGGCCA--AGUGACACU ::|:||| | || ||||||||: GUCACCUGUAUACUGUGUCAGGAGGAG-CAGGAGGUCACUGUGGA Ubr2 rno-miR-128b 177 184 --------------------CUUUCUCUGGCCA--AGUGACACU |:|:||| | || ||||||||: GUCACCUGUAUACUGUGUCAGGAGGAG-CAGGAGGUCACUGUGGA Ubr2 rno-miR-144 151 158 GA-------------------UCAUGUAGU--AGAUAUGACAU ||| ::||| | ||||||||: CACAGGUCCCUGAGCCCAGACAGUUUGUCACCUGUAUACUGUGU Ubr2 rno-miR-15b 494 501 ----ACAUU-------------UGGUACUAC----ACGACGAU |||:| |||:|||| ||||||| GCUCUGUGAGUGCCUGAGCAACACCGUGAUCCCCCUGCUGCUU Ubr2 rno-miR-15b 621 628 A-----CAUUUGGUACUA-----------------CACGACGAU ||:| ||| ||| ||||||||: AUAAAGGUGAUCCA-GAUGCUAAGGAAAGGAGACAGUGCUGCUGA Ubr2 rno-miR-16 494 501 ---------------------GCGGUUAUAAAUGCACGACGAU | ||: ||||||| GCUCUGUGAGUGCCUGAGCAACACCGUGAUCCCCCUGCUGCUU Ubr2 rno-miR-16 621 628 ----------------GCGGUUAUAAA----UG-CACGACGAU :||:|| || ||||||||: AUAAAGGUGAUCCAGAUGCUAAGGAAAGGAGACAGUGCUGCUGA Ubr2 rno-miR-195 494 501 C----------------------GGUUAUAAAGACACGACGAU ||: ||||||| GCUCUGUGAGUGCCUGAGCAACACCGUGAUCCCCCUGCUGCUU Ubr2 rno-miR-195 621 628 -----------------CGGUUAUAAAGA-----CACGACGAU ||:|| ||||||||: AUAAAGGUGAUCCAGAUGCUAAGGAAAGGAGACAGUGCUGCUGA Ubr2 rno-miR-199a 317 324 CUUGUC--------------------CAUCAGACUUGUGACCC ||:| ||||||| ACUAUUCAUGCACCCUGAUCUGUCCUGUGGAACACACACUGGC Ubr2 rno-miR-214 492 499 G-----------ACGGACA------GACAC-----GGACGACA |||||| | ||| ||||||| CCGCUCUGUGAGUGCCUGAGCAACACCGUGAUCCCCCUGCUGC Ubr2 rno-miR-22 322 329 UGUCAAGAAGU---------------------UGACCGUCGAA |||||||||| UCAUGCACCCUGAUCUGUCCUGUGGAACACACACUGGCAGCUG Ubr2 rno-miR-298 41 48 CCU---------------------UCUUGUCGGGAGGAGACGG |||:| | | |||||||| CAAAGAGCUCUUCCAGCAGACCAUAGAGCUGGACGCCUCUGCCU Ubr2 rno-miR-298 47 54 CCU---------------UCUUGU----CGG-GA-GGAGACGG |||:| ||| || |||||||| GCUCUUCCAGCAGACCAUAGAGCUGGACGCCUCUGCCUCUGCCG Ubr2 rno-miR-298 450 457 CC-------------------UUCUUGUCGG--GAGGAGACGG :|||||:|| :||||||||| CUGCACACUAGCUACGAUGUAGAGAACGGCGAGUUCCUCUGCCC Ubr2 rno-miR-298 895 902 -------------CCUUCUUGUCGGGA--------GGAGACGG |||:||| ||||| |||||||| GAAUUCUGAGUGAGGAGGAAAAGCCCGUGUUCGGACCUCUGCCC Ubr2 rno-miR-370 519 526 UU--------------------GGUCCAAGGUGGGGUCGUCCG ||||| | ||:||||||| GUGAUCCCCCUGCUGCUUCCUCCCAGGAGCAUCCUCAGCAGGA Ubr2 rno-miR-378 158 165 ----------UGUGUCC-----UGGAC------CUCAGUCCUC | |||| ||||| | |||||||| CCCUGAGCCCAGACAGUUUGUCACCUGUAUACUGUGUCAGGAGG Ubr2 rno-miR-424 494 501 A-----------GGUUUUGU------ACUUA----ACGACGAC || :|:|| ||| ||||||| GCUCUGUGAGUGCCUGAGCAACACCGUGAUCCCCCUGCUGCUU Ubr2 rno-miR-424 621 628 ----------AGGUUU-UGUA--CUUA--------ACGACGAC ||||:| :| ||| |||||||| AUAAAGGUGAUCCAGAUGCUAAGGAAAGGAGACAGUGCUGCUGA Ubr2 rno-miR-494 1063 1070 UCCAA-------AGGGCACA---------------UACAAAGU ||||||| |||||||| GCUCUGAAGACCUCCCGUGCAUAUUAGACAUCGACAUGUUUCAU Ubr2 rno-miR-497 494 501 A----------------UGUUUGGUGUCAC-------ACGACGAC :|| ||| ||| ||||||| GCUCUGUGAGUGCCUGAGCAA--CACCGUGAUCCCCCUGCUGCUU Ubr2 rno-miR-497 621 628 AUGU----UUGGUGUCA------------------CACGACGAC :|:| ||| ||||||||| AUAAAGGUGAUC-CAGAUGCUAAGGAAAGGAGACAGUGCUGCUGA