DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000547 | rno-miR-322* | 363267 | LOC363267 | acaacgucgcGAAGUACAAa | | ||||||| | uaauaguuucCGUCAUGUUu | 2 | 11 | 232 | 251 | [rn4:9:82536453-82536472:+] | 0.5452 | 142 | 7 | -10.35 | -0.6444 |
MIMAT0004639 | rno-miR-325-3p | 363267 | LOC363267 | aacuauccuccACGAGUUAUUu | | :||||||| | guuacagcuucUCUUCAAUAAa | 2 | 12 | 353 | 374 | [rn4:9:82536574-82536595:+] | 0.5452 | 143 | 7 | -7.05 | -1.1570 |
MIMAT0000599 | rno-miR-349 | 363267 | LOC363267 | ucucCAAUUCUGUCGUCCCGAc | | || |: ||||||||| | cucuGCUAUGG-AGCAGGGCUg | 2 | 19 | 9 | 29 | [rn4:9:82536230-82536250:+] | 0.4728 | 156 | 7 | -21.47 | -0.1189 |
MIMAT0000900 | rno-miR-298 | 363267 | LOC363267 | ccCUUCUU-G-UCGGG---AGGAGACGg | ||| || | ||||| |||||||| | gaGAACAAGCGAGCCCAUUUCCUCUGCc | 2 | 22 | 62 | 89 | [rn4:9:82536283-82536310:+] | 0.5452 | 162 | 7 | -30.59 | -0.6759 |
MIMAT0004743 | rno-miR-300-5p | 363267 | LOC363267 | uguuuccUAUUGGAGAGAAGUu | | |:|:|||||||| | ugauguuACAGCUUCUCUUCAa | 2 | 16 | 349 | 370 | [rn4:9:82536570-82536591:+] | 0.5452 | 159 | 7 | -18.20 | -1.2143 |
MIMAT0004743 | rno-miR-300-5p | 363267 | LOC363267 | uguUUCCU-AUUGGA-GAGAAGUu | | ||| |:||| ||||||| | uccAUGGAGCAGCCUGCUCUUCAc | 2 | 20 | 110 | 133 | [rn4:9:82536331-82536354:+] | 0.5452 | 157 | 7 | -19.36 | -0.2580 |
MIMAT0003378 | rno-miR-378* | 363267 | LOC363267 | ugUGUCCUGG--ACCUCAGUC-CUc | :||||:|: ||| ||||| || | gaGCAGGGCUGAUGGUGUCAGUGAu | 2 | 21 | 19 | 43 | [rn4:9:82536240-82536264:+] | 0.4728 | 131 | 0 | -24.22 | -0.1337 |
MIMAT0005286 | rno-miR-878 | 363267 | LOC363267 | agaugggucaUACCACAGU-ACg | ||||||||| || | agcagggcugAUGGUGUCAGUGa | 2 | 13 | 20 | 42 | [rn4:9:82536241-82536263:+] | 0.4728 | 124 | 0 | -20.11 | -0.3541 |
MIMAT0012837 | rno-miR-632 | 363267 | LOC363267 | aggccguccuuUGUCUGUg | ||||||| | cucuucacuucACAGACAu | 2 | 9 | 126 | 144 | [rn4:9:82536347-82536365:+] | 0.5452 | 140 | 7 | -10.67 | -0.2991 |
MIMAT0000583 | rno-miR-339-5p | 363267 | LOC363267 | gcaCUCGAGGACCU-CCU-GUCCCu | |:||||: | ||| ||||| | aaaGGGCUCUGCUAUGGAGCAGGGc | 2 | 21 | 3 | 27 | [rn4:9:82536224-82536248:+] | 0.4005 | 123 | 0 | -25.80 | -0.1432 |
MIMAT0000828 | rno-miR-124 | 363267 | LOC363267 | ccgUAAGUGGCGCACGGAAu | | ||| | ||||||| | ugaAGUCA--GAGUGCCUUa | 2 | 18 | 283 | 300 | [rn4:9:82536504-82536521:+] | 0.5452 | 146 | 7 | -13.99 | -0.8435 |
MIMAT0000866 | rno-miR-191 | 363267 | LOC363267 | gucgacgaaaaccCUAAGGCAac | | |||||| | aaugucacuaauaGUUUCCGUca | 3 | 11 | 224 | 246 | [rn4:9:82536445-82536467:+] | 0.5452 | 122 | 0 | -7.94 | -0.1477 |
MIMAT0000876 | rno-miR-203 | 363267 | LOC363267 | gaucaccaGGAUUUGUAAAGUg | ||| ||||||| | uuccucugCCUCCUCAUUUCAu | 2 | 15 | 80 | 101 | [rn4:9:82536301-82536322:+] | 0.5452 | 146 | 7 | -12.93 | -0.4726 |
MIMAT0003179 | rno-miR-542-3p | 363267 | LOC363267 | aaagucaauaguuagACAGUGu | |||||| | auaauacaugguaaaUGUCACu | 2 | 8 | 211 | 232 | [rn4:9:82536432-82536453:+] | 0.5452 | 120 | 6 | -8.88 | -0.1055 |