DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000594 rno-miR-345-5p 361765 Btrc cgugaCCUG-AUC-CCCAGUCGu |||| || ||||||| uguugGGACACAGCCGGUCAGCa 2 17 147 169 [rn4:1:250693739-250693761:+] 0.6212 146 7 -21.11 -0.2622 MIMAT0000604 rno-miR-350 361765 Btrc caCUUUCACA-UACCCGAA-ACACUu |||: ||| | ||| ||||| caGAAGAUGUCUUUAUCUUGUGUGAa 2 23 219 244 [rn4:1:250693811-250693836:+] 0.6212 121 0 -12.99 -1.0868 MIMAT0004719 rno-miR-30c-1* 361765 Btrc ccucauuuguuGGGAGAGGGUc ::|||||||| ucugcaccuguUUCUCUCCCAu 2 12 289 310 [rn4:1:250693881-250693902:+] 0.5971 147 7 -15.96 -0.6031 MIMAT0005442 rno-miR-30c-2* 361765 Btrc ucucauUUGUCGGA-AGAGGGUc | | |::| ||||||| cucugcACCUGUUUCUCUCCCAu 2 17 288 310 [rn4:1:250693880-250693902:+] 0.5971 147 7 -14.47 -0.5994 MIMAT0000813 rno-miR-34b 361765 Btrc guuaGUCGAUUAAUGUG-ACGGAu ||| || ||| || ||||| guugCAG-UAUUUA-ACAUGCCUg 2 20 43 64 [rn4:1:250693635-250693656:+] 0.6212 123 0 -14.83 -0.6033 MIMAT0000900 rno-miR-298 361765 Btrc cccuucuugucGGGAGGAGACGg ||:|||||||| cucuccuucccCCUUCCUCUGCa 2 13 272 294 [rn4:1:250693864-250693886:+] 0.5971 156 7 -22.54 -0.9579 MIMAT0003202 rno-miR-382* 361765 Btrc uucACAACAGGCACUUACUAa | |||| ||||||||| uuaUCUUGU--GUGAAUGAUu 2 19 231 249 [rn4:1:250693823-250693841:+] 0.6212 159 7 -14.60 -0.7513 MIMAT0005280 rno-miR-743b 361765 Btrc agAUAAGUCAUACCACAGAAAg || |||| | | ||||||| gcUA-UCAG-AAGAUGUCUUUa 2 21 214 233 [rn4:1:250693806-250693825:+] 0.6212 156 7 -14.59 -1.1787 MIMAT0005287 rno-miR-879 361765 Btrc ccgAAUCUCGAUA-UUCGGAGa ||:|| || | ||||||| ugaUUGGAACUUUCAAGCCUCc 2 19 245 266 [rn4:1:250693837-250693858:+] 0.6091 161 7 -16.03 -0.2713 MIMAT0005334 rno-miR-743a 361765 Btrc agAUGGGUCAAACCGCAGAAAg || :||| | :|||||| gcUA-UCAG-AAGAUGUCUUUa 2 21 214 233 [rn4:1:250693806-250693825:+] 0.6212 128 6 -15.07 -0.1294 MIMAT0001619 rno-miR-322 361765 Btrc agguuuuguacuUAACGACGAc | ||||||| accggcugcuucAGUGCUGCUa 2 11 196 217 [rn4:1:250693788-250693809:+] 0.6212 142 7 -15.06 -0.7774 MIMAT0000784 rno-miR-15b 361765 Btrc acauuugguacuaCACGACGAu |||||||| accggcugcuucaGUGCUGCUa 2 10 196 217 [rn4:1:250693788-250693809:+] 0.6212 145 7 -17.70 -0.7774 MIMAT0000785 rno-miR-16 361765 Btrc gcGGUU-AUAAAUGCACGACGAu ||:: |: || |||||||| caCCGGCUGCUUCAGUGCUGCUa 2 21 195 217 [rn4:1:250693787-250693809:+] 0.6212 155 7 -20.72 -0.7737 MIMAT0000800 rno-miR-28 361765 Btrc gagUUAUCU-GACACUC-GAGGAa |: ||: || |||| ||||| aggAGCAGGCCUUUGAGACUCCUg 2 20 125 148 [rn4:1:250693717-250693740:+] 0.6212 126 0 -16.21 -0.2289 MIMAT0000846 rno-miR-141 361765 Btrc ggUAGAAAUGGUCUGUCACAAu || || :| :|||||| uuAUAAAUA-UAUUUAGUGUUu 2 21 332 352 [rn4:1:250693924-250693944:+] 0.6328 126 6 -8.59 -0.1882 MIMAT0000862 rno-miR-185 361765 Btrc aguCCUUGACGGAAAGAGAGGu | | ||| ||||||||| ucuGCACCUG--UUUCUCUCCc 2 20 289 308 [rn4:1:250693881-250693900:+] 0.5971 156 7 -18.32 -0.8175 MIMAT0000870 rno-miR-195 361765 Btrc cgguuAUAAAGACACGACGAu |: ||| |||||||| ccggcUGCUUCAGUGCUGCUa 2 17 197 217 [rn4:1:250693789-250693809:+] 0.6212 160 7 -21.39 -0.7737 MIMAT0000872 rno-miR-199a-5p 361765 Btrc cuuguccaucagacUUGUGACCc :||||||| -------auaacgcGACACUGGc 2 10 1 16 [rn4:1:250691941-250691956:+] 0.5889 141 7 -12.61 -0.2102 MIMAT0000873 rno-miR-200c 361765 Btrc gguAGUAA-UGGGCCGUCAUAAu ||:|| || : |||||||| gacUCGUUAACGUUGCAGUAUUu 2 20 32 54 [rn4:1:250693624-250693646:+] 0.6212 162 7 -17.90 -0.7376 MIMAT0000874 rno-miR-200a 361765 Btrc ugUAGCAAUGGUCUGUCACAAu || || :| :|||||| uuAUAAAUA-UAUUUAGUGUUu 2 21 332 352 [rn4:1:250693924-250693944:+] 0.6328 126 6 -8.12 -0.1899 MIMAT0000875 rno-miR-200b 361765 Btrc caguAGUAAUGGU-CCGUCAUAAu ||:||| |: |||||||| ggacUCGUUAACGUUGCAGUAUUu 2 20 31 54 [rn4:1:250691971-250691971,250693624-250693646:+] 0.6051 162 7 -16.90 -0.7034 MIMAT0001538 rno-miR-429 361765 Btrc ugccGUAAUGGU-CUGUCAUAAu |:||| |: :||||||| gacuCGUUAACGUUGCAGUAUUu 2 19 32 54 [rn4:1:250693624-250693646:+] 0.6212 153 7 -13.42 -0.7376 MIMAT0001626 rno-miR-431 361765 Btrc acguacugcCGGAC-GUUCUGu ||||| |||||| auuuaacauGCCUGCCAAGACc 2 13 51 72 [rn4:1:250693643-250693664:+] 0.6212 124 6 -17.72 -0.5286 MIMAT0003119 rno-miR-224 361765 Btrc auuugccuuggugaucACUGAAc |||||| ggguuccagacaaagaUGACUUa 2 8 312 334 [rn4:1:250693904-250693926:+] 0.6149 120 6 -12.84 -0.1602 MIMAT0003123 rno-miR-377 361765 Btrc ggUUUUCAACGGA-----AACACACUa |:||| ||:|| |||||||| ucAGAAGAUGUCUUUAUCUUGUGUGAa 2 21 218 244 [rn4:1:250693810-250693836:+] 0.6212 159 7 -22.32 -1.1837 MIMAT0003383 rno-miR-497 361765 Btrc auguuUGGUGUCACACGACGAc :|: || |||||||| cggcuGCUUCA--GUGCUGCUa 2 18 198 217 [rn4:1:250693790-250693809:+] 0.6212 146 7 -15.16 -0.7737 MIMAT0005300 rno-miR-182 361765 Btrc gccacacucaAGAUGGU--AACGGUUu |:|| :: ||||||: uauaaauauaUUUAGUGUUUUGCCAG- 2 16 333 358 [rn4:1:250693925-250693950:+] 0.6328 126 0 -10.42 -0.2625 MIMAT0005331 rno-miR-708 361765 Btrc gggUCGAUCUAACAUUC-GAGGAa ||| :| | |:|| ||||| aggAGCAGGCCUUUGAGACUCCUg 2 21 125 148 [rn4:1:250693717-250693740:+] 0.6212 124 0 -14.56 -0.2331

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G116729 Btrc Rattus norvegicus 361765

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Btrc rno-let-7a 186 210 UUGAUAUGU-UGGAUGAUGGAGU- :|| :|| ||| :||:|:||| UGCUCGGCACACCGGCUGCUUCAG Btrc rno-let-7b 186 210 UUGG--UGUGUUGGAUGAUGGAGU- :|: :||| ||| :||:|:||| UGCUCGGCAC-ACCGGCUGCUUCAG Btrc rno-let-7c 186 210 UUGGUAUGU-UGGAUGAUGGAGU- :|: :|| ||| :||:|:||| UGCUCGGCACACCGGCUGCUUCAG Btrc rno-let-7d 186 209 -UGAUACGU-UGGAUGAUGGAGA :|| ||| ||| :||:|:|| UGCUCGGCACACCGGCUGCUUCA Btrc rno-let-7e 186 210 -UGAUAUGU-UGGAGGAUGGAGU- :|| :|| ||| ||:|:||| UGCUCGGCACACCGGCUGCUUCAG Btrc rno-let-7i 189 210 UGUCGUGUUUGAUGAUGGAGU- |:||||| :||:|:||| UCGGCACACCG-GCUGCUUCAG Btrc rno-miR-101a 203 244 -GAAGUCA-----AUAGUG-UC-----------AUGACAU ||||||| ||||| || | |||: GCUUCAGUGCUGCUAUCAGAAGAUGUCUUUAUCUUGUGUGA Btrc rno-miR-101b 197 216 GAAGUCGAUAGUGUCAUGACAU |:|||: ||||:||| --CCGGCUGCUUCAGUGCUGC- Btrc rno-miR-103 190 218 AGUAUCGG------GACAU-GUUACGACGA- :|| ||| ||:||||||| ---CGGCACACCGGCUGCUUCAGUGCUGCUA Btrc rno-miR-107 190 218 ACUAUCGG------GACAU-GUUACGACGA- :|| ||| ||:||||||| ---CGGCACACCGGCUGCUUCAGUGCUGCUA Btrc rno-miR-130a 24 52 UACGGGAA------AAUUGUAACGUGAC ||||| |||||:||||| | UUGCCCAGGACUCGUUAACGUUGCAGUA Btrc rno-miR-133a 155 180 -UGUCGACCAACU-UCCCCUGGUU- ||||| ||| || |||||: CACAGCCGGUCAGCAGCCGACCAGG Btrc rno-miR-133b 127 161 AUCGACC---AACUUC--------CCCUG-GUU- ||| || ||||: ||||| ||: GAGCAGGCCUUUGAGACUCCUGUUGGGACACAGC Btrc rno-miR-134 143 171 -GGGA-GACCA---GUUGGUCAGU-GU- :||| :||| ||:||:|||| || CUCCUGUUGGGACACAGCCGGUCAGCAG Btrc rno-miR-138 4 18 CUAAGUGUUGUGGUCGA |:|:||||::|| ---ACGCGACACUGGCC Btrc rno-miR-15b 195 219 ACAUUUGGU--ACUA---CACGACGAU- |||: || ||||||||| ----CACCGGCUGCUUCAGUGCUGCUAU Btrc rno-miR-16 202 219 GCGGUUAUAAAUGCACGACGAU- ||: ||||||||| UGCUUCA------GUGCUGCUAU Btrc rno-miR-185 289 309 CUUGACGG----AAAGAGAGGU |||| ||||||||| --UCUGCACCUGUUUCUCUCCC Btrc rno-miR-191 127 153 -UCGA-CGAAAACCCUAAGG-CAAC- ||| || |||| || ||| |||| GAGCAGGCCUUUGAGACUCCUGUUGG Btrc rno-miR-193 149 169 GACCCUGAAACAUCCGGUCAA |||||| ||:||| UUGGGACACAGCCGGUCAGC- Btrc rno-miR-195 196 219 CGGUU-AUAAAGACACGACGAU- ||:: |: ||| ||||||||| ACCGGCUGCUUCAGUGCUGCUAU Btrc rno-miR-200c 17 55 -GGUAGUAAUGGG-C--------------CGUCAUAAU :||| |||:||| | |||||||| CUCAUAAUUGCCCAGGACUCGUUAACGUUGCAGUAUUU Btrc rno-miR-207 103 132 UUCCCU-----CCUCUC-GGUC-CUCUUCG- ||| ||| :| |||| |||:||| --CGGAUUCCUGGACGGACCAGCGAGGAGCA Btrc rno-miR-20b* 28 52 -GUCUUCA-CGAGUGUGACGUCA- |||:| |: ||::|||||| CCAGGACUCGUUAACGUUGCAGUA Btrc rno-miR-214 200 218 -GACGGACAGACACGGACGACA ||||: || ||| ||||| GCUGCU--UCAGUG-CUGCUA- Btrc rno-miR-28 130 149 GAGUUAUCUGAC-ACUC-GAGGAA ||:| |||| ||||| -----CAGGCCUUUGAGACUCCUG Btrc rno-miR-291-5p 125 156 -UCUCUCCCGG--------AGGUGAAA-CUAC :||| |||| ||| || || AGGAGCAGGCCUUUGAGACUCCUGUUGGGAC- Btrc rno-miR-298 123 152 CCUUCUUGUCGGGAGGA------GACGG- ||:||:||| |||:: |||:: CGAGGAGCAGGCCUUUGAGACUCCUGUUG Btrc rno-miR-29a 195 219 UUGGCUA---AAGUCUACCACGAU- ||||: ||||| || ||||| CACCGGCUGCUUCAG-UGCUGCUAU Btrc rno-miR-29c 195 219 -UGGCUA---AAGUUUACCACGAU- ||||: ||| |:|| ||||| CACCGGCUGCUUC-AGUGCUGCUAU Btrc rno-miR-328 113 137 -UGCCUUCCCGUCUCUC--CCGGUC ||||| ||: :||| |||| GACGGACCAGCGAGGAGCAGGCCU- Btrc rno-miR-330 183 214 AGAGACGU-CCG---GGAC-ACGAA---ACG- ||||| ||| || | ||||| ||| -GUCUGCUCGGCACACCGGCUGCUUCAGUGCU Btrc rno-miR-333 181 201 UUUUCAU-UGA-UCGUGUGGUG :|| :|| :|||||||: --CGGUCUGCUCGGCACACCGG Btrc rno-miR-341 169 187 UGACUGGCUGG-CUGGCUAGCU :|||||| |: ||:|| ---AGCCGACCAGGACGGUCU- Btrc rno-miR-345 128 171 -CGU-----GAC-CUGA------UCC--------CCAGUCGU ||| :|| |||| :|| |||||||| AGCAGGCCUUUGAGACUCCUGUUGGGACACAGCCGGUCAGCAG Btrc rno-miR-347 125 158 ACC-CG-CUGGG---UCU--------CCCUGU- || || |:||: ||| |||||| AGGAGCAGGCCUUUGAGACUCCUGUUGGGACAC Btrc rno-miR-34a 140 164 -UUGUUGGUCGAUUCUGUGACGGU- :|| || |:|::||||| |||: AGACU-CCUGUUGGGACACAGCCGG Btrc rno-miR-34c 180 218 CGUUAGUCGA---------UUGAUG------UGACGGA |::|| ||| ::||:| :||||: ACGGUCUGCUCGGCACACCGGCUGCUUCAGUGCUGCUA Btrc rno-miR-377 217 245 -GGUUUUCAACGGA-----AACACACUA :||:||| ||:|| |||||||| AUCAGAAGAUGUCUUUAUCUUGUGUGAA Btrc rno-miR-382* 225 251 UUCACAACAGG---------CACUUACUAA- ||||: |||||||||| -----AUGUCUUUAUCUUGUGUGAAUGAUUG Btrc rno-miR-383 168 209 -UCGG-------UGUCAG----------UGGAAGACU-AGA |||| ||:||| ||| ||| || CAGCCGACCAGGACGGUCUGCUCGGCACACCGGCUGCUUCA Btrc rno-miR-424 174 207 AGGUUUUGU---ACUUAA--------CGACGAC |||::||: || |||||| ACCAGGACGGUCUGCUCGGCACACCGGCUGCUU Btrc rno-miR-431 166 196 ACGUA--------CUGCCGGACGUUCUGU- ||| |||||:|||| |:|| AGCAGCCGACCAGGACGGUCUGCUCGGCAC Btrc rno-miR-483 111 131 UGUUCUGCCCUCCC-CUCCUCACU :||||| | |||||| --UGGACGGACCAGCGAGGAGC-- Btrc rno-miR-485 103 125 -CUUAAGUAG-UGCC-GGUCGGAGA |:|||| |||| ||||| CGGAUUCCUGGACGGACCAGCG--- Btrc rno-miR-489 210 231 -CGACGGUAUAUACACUACAGUAA |||||:|| |||||| UGCUGCUAUCAGAA-GAUGUCU-- Btrc rno-miR-497 193 218 AUGU--UUGGUGUCA-CACGACGAC ||| ::|::| |||||||| CACACCGGCUGCUUCAGUGCUGCUA Btrc rno-miR-503 199 219 GUCAUGAC-AAGG-GCGACGAU- :||| ||| :||||||| ---GGCUGCUUCAGUGCUGCUAU Btrc rno-miR-93 108 141 GAUGGACGUGCUU-GUCGU----------GAAAC- |||| |||:| ||||: ||||| --UCCUGGACGGACCAGCGAGGAGCAGGCCUUUGA Btrc rno-let-7b 188 208 uuGGUGUGUUGGAUGAUGGAGU | :||| ||| :||:|:||| ctCGGCAC-ACCGGCTGCTTCA Btrc rno-let-7d 187 208 uGAUACGU-UGGAUGAUGGAGa || ||| ||| :||:|:|| gCTCGGCACACCGGCTGCTTCa Btrc rno-let-7e 187 208 uGAUAUGU-UGGAGGAUGGAGU || :|| ||| ||:|:||| gCTCGGCACACCGGCTGCTTCA Btrc rno-miR-101a 195 216 gaaGUCAAUAGUGUCAUGACau |:| |: : ||||:||| cacCGGCTGCTTCAGTGCTGct Btrc rno-miR-101b 195 216 gaaGUCGAUAGUGUCAUGACau |:|||: : ||||:||| cacCGGCTGCTTCAGTGCTGct Btrc rno-miR-103 192 216 aGUAUCGG--GAC-AUGUUACGACGA || | || ||| | ||:||||||| gCACA-CCGGCTGCTTCAGTGCTGCT Btrc rno-miR-107 191 216 acuaucGG--GAC-AUGUUACGACGA || ||| | ||:||||||| ggcacaCCGGCTGCTTCAGTGCTGCT Btrc rno-miR-133a 126 159 ugUCGACC---AACUU------C--CCCUG-GUu ||| || ||||: | ||||| || ggAGCAGGCCTTTGAGACTCCTGTTGGGACACAg Btrc rno-miR-134 145 168 GGGAGACC---AGUUGGUCAGUgu ||: :||| ||:||:|||| CCTGTTGGGACACAGCCGGTCAgc Btrc rno-miR-138 1 17 cuaaGUGUUGUGGUCGa |:|:||||::|| ataaCGCGACACTGGCc Btrc rno-miR-151* 128 150 auGAUCUGACACUC-GAGGAgcu | :| || |||| ||||| agCAGGCCTTTGAGACTCCTgtt Btrc rno-miR-15b 191 217 aCAUUUGGU--ACUA---CACGACGAU | | |||: || | ||||||||| gGCACACCGGCTGCTTCAGTGCTGCTA Btrc rno-miR-16 195 217 GCGGUU-AUAAAUGCACGACGAU | ||:: |: || ||||||||| CACCGGCTGCTTCAGTGCTGCTA Btrc rno-miR-185 287 308 cuuGAC--GG--AAAGAGAGGu ||| || ||||||||| cctCTGCACCTGTTTCTCTCCc Btrc rno-miR-191 128 151 UCG-ACGAAAACCCU-AAGGCAAC ||| || |||| || | |:|||| AGCAGGCCTTTGAGACTCCTGTTG Btrc rno-miR-193 149 169 gACCCUGAAACAUCCGGUCaa |||||| | ||:||| tTGGGACACAGCCGGTCAGca Btrc rno-miR-195 196 217 cGGUU-AUAAAGACACGACGAU ||:: |: ||| ||||||||| aCCGGCTGCTTCAGTGCTGCTA Btrc rno-miR-200b 32 54 CAGUAGUAAUGGU-CCGUCAUAAu | | ||:||| |: |||||||| GAC-TCGTTAACGTTGCAGTATTt Btrc rno-miR-200c 28 54 GGU----AGUAA-UGGGCCGUCAUAAu ||| ||:|| || : |||||||| CCAGGACTCGTTAACGTTGCAGTATTt Btrc rno-miR-207 109 133 uucCCU-CCU-CUCGGUCCUCUUCg ||| ||| ||| ||||| || cctGGACGGACCAGCGAGGAGCAGg Btrc rno-miR-20b* 29 50 GUCUUCA-CGAGUGUGACGUCA |||:| | |:| ||::|||||| CAGGACTCGTTAACGTTGCAGT Btrc rno-miR-214 181 204 GACGGAC-AGAC--ACGGACGACa | |:||| || | || |||| CGGTCTGCTCGGCACACCGGCTGc Btrc rno-miR-28 126 148 gaguuauCUGACACUC-GAGGAa | || |||| ||||| ggagcagGCCTTTGAGACTCCTg Btrc rno-miR-291-5p 121 142 UCUCUCC-CGGAGGUGAAACUac || |||| || | |||||| AGCGAGGAGCAGGC-CTTTGAga Btrc rno-miR-298 273 294 ccuucuugucGGGAGGAGACGg ||:|||||||| tctccttcccCCTTCCTCTGCa Btrc rno-miR-29c 196 217 UGGCUAA--AGUUUACCACGAU ||||: | |: |:|| ||||| ACCGGCTGCTTCAGTGCTGCTA Btrc rno-miR-328 114 137 UGCCUUCCCGUCUCUC--CCGGuc ||||| ||: :||| |||| ACGGACCAGCGAGGAGCAGGCCtt Btrc rno-miR-330 182 209 agAGACG-UCCG---GGAC-ACGAAacg ||||| ||| || | ||||| ggTCTGCTCGGCACACCGGCTGCTTcag Btrc rno-miR-333 180 200 uuuucauuGA-UCGUGUGGug || :||||||| acggtctgCTCGGCACACCgg Btrc rno-miR-341 170 192 uGACUGG--CUGGCUGGCUAGCu | |||| ||| | |:| ||| gCCGACCAGGACGGTCTGCTCGg Btrc rno-miR-345 147 169 cgugaCCUG-AUC-CCCAGUCGU |||| || |||||||| tgttgGGACACAGCCGGTCAGCA Btrc rno-miR-345 167 191 CGUGACCUGAUCC--CCAGUCGU-- ||| ||| ||| |||| || GCAGCCGACCAGGACGGTCTGCTCG Btrc rno-miR-347 111 131 ACCCGCUGGGU--CUCCCUGU ||| ||: ||| |||| :|| TGGACGGACCAGCGAGGAGCA Btrc rno-miR-34c 192 214 CGU-UAGUCGAUUGAUGUGACGga ||| | |:||| :|| || ||| GCACACCGGCT-GCTTCAGTGCtg Btrc rno-miR-377 218 244 gGUUUUCAACGGA-----AACACACUa ||:||| ||:|| |||||||| tCAGAAGATGTCTTTATCTTGTGTGAa Btrc rno-miR-382* 231 249 uucACAACAGGCACUUACUAA | |||| |||||||||| ttaTCTTGT--GTGAATGATT Btrc rno-miR-383 169 191 UCGGU--GUCAGUGGAAGACUAGa ||||: ||| || |||| || AGCCGACCAG-GACGGTCTGCTCg Btrc rno-miR-424 196 217 agguuuuguacuUAACGACGAc | ||||||| accggctgcttcAGTGCTGCTa Btrc rno-miR-431 174 194 acGUACUGCCGGACGUUCUGU || |||||:|||| |:|| acCAGGACGGTCTGCTCGGCA Btrc rno-miR-483 109 132 uGUUCUGCC-CUCCCCUCCUCacu | :||||| | |||||| cCTGGACGGACCAGCGAGGAGcag Btrc rno-miR-485 104 127 CUUAAGUA-GUGCC-GGUCGgaga |:|||| | |||| ||||| GGATTCCTGGACGGACCAGCgagg Btrc rno-miR-489 211 232 CGACGGUAUAUACACUACAGUAA |||||:|| | |||||| || GCTGCTAT-CAGAAGATGTCTTT Btrc rno-miR-497 191 217 auGUUUGG-UGUC--A--CACGACGAc || ||| :| | | |||||||| ggCACACCGGCTGCTTCAGTGCTGCTa Btrc rno-miR-503 198 217 GUCAUGACAAGG--GCGACGAU |:| ||| |:| :||||||| CGG--CTGCTTCAGTGCTGCTA Btrc rno-miR-93 116 139 gaUGGACG-UGCUUGU-CGUGAAAC ||| || | ||:|| || ||||| ggACCAGCGAGGAGCAGGC-CTTTG Btrc rno-miR-15b 210 217 ACAUU----------------UGGUACUA-----CACGACGAU |||: ||||||||| CCAGGACGGUCUGCUCGGCACACCGGCUGCUUCAGUGCUGCUAU Btrc rno-miR-16 210 217 --------------------GCGGUUAUAAAUG-CACGACGAU | ||:: ||||||||| CCAGGACGGUCUGCUCGGCACACCGGCUGCUUCAGUGCUGCUAU Btrc rno-miR-185 301 308 CUU---------------------GACGG----AAAGAGAGGU |||| ||||||||| CCUCCCCUCUCCUUCCCCCUUCCUCUGCACCUGUUUCUCUCCC Btrc rno-miR-195 210 217 C---------------------GGUU-AUAAAGACACGACGAU ||:: |: ||| ||||||||| CCAGGACGGUCUGCUCGGCACACCGGCUGCUUCAGUGCUGCUAU Btrc rno-miR-200b 47 54 C-----AGUAGUAAUGG-UC--------------CGUCAUAAU |||| |||:|| || |||||||| CUGGCCUCAUAAUUGCCCAGGACUCGUUAACGUUGCAGUAUUU Btrc rno-miR-200c 47 54 ------GGUAGUAAUGGGC---------------CGUCAUAAU :||| |||:||| |||||||| CUGGCCUCAUAAUUGCCCAGGACUCGUUAACGUUGCAGUAUUU Btrc rno-miR-298 287 294 CCUUCUUGUC---------------------GGGAGGAGACGG ||:|||||||| AACUUUCAAGCCUCCCUCCCCUCUCCUUCCCCCUUCCUCUGCA Btrc rno-miR-345 162 169 ---------------------CGUGACCUGA-UCC-CCAGUCGU |: |||| || |||||||| GAGCAGGCCUUUGAGACUCCUGUUG-GGACACAGCCGGUCAGCAG Btrc rno-miR-377 237 244 ----------------GGUUUUCAACGGA-----AACACACUA :||:||| ||:|| |||||||| UGCUUCAGUGCUGCUAUCAGAAGAUGUCUUUAUCUUGUGUGAA Btrc rno-miR-382* 242 249 UUCACAAC----------------------AGGCACUUACUAA |||| || | :|||||||||| CAGUGCUGCUAUCAGAAGAUGUCUUUAUCUUGUGUGAAUGAUUG Btrc rno-miR-424 210 217 AGGUUUUGUACUUA-----------------------ACGACGAC |||::||: | ||||||| -CCAGGACG-GUCUGCUCGGCACACCGGCUGCUUCAGUGCUGCUA Btrc rno-miR-497 210 217 A--------------------UGUUUGGUGUCA-CACGACGAC || :| | |||||||| CCAGGACGGUCUGCUCGGCACACCGGCUGCUUCAGUGCUGCUA