DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000547 rno-miR-322* 290997 Uimc1 acAACGUCGCGAAGUACAAa ||| | :| ||||||| ugUUGGAUUG-GUCAUGUUc 2 19 36 54 [rn4:17:15644677-15644695:+] 0.6415 148 7 -14.58 -0.8043 MIMAT0004646 rno-miR-338* 290997 Uimc1 gugagucgUGGUCCUA-UAACAa ||||| || ||||| ggaggaugACCAGAAUGAUUGUu 2 15 14 36 [rn4:17:15644655-15644677:+] 0.6415 126 0 -12.13 -0.3265 MIMAT0004652 rno-miR-342-5p 290997 Uimc1 gaGUUAGUGUCUA-UCGUGGGGa ||: | | | |||||||: acCAGCGUCUGUUCAGCACCCUg 2 21 111 133 [rn4:17:15644752-15644774:+] 0.6415 131 0 -15.48 -0.1611 MIMAT0004705 rno-let-7b* 290997 Uimc1 cccuuccgucauccAACAUAUc ||||||: aaauauauuuaucuUUGUAUG- 2 9 224 244 [rn4:17:15644865-15644885:+] 0.6415 124 0 -3.63 -0.4526 MIMAT0004709 rno-miR-10a-3p 290997 Uimc1 auaaggggaucUAUGCUUAAAc :| :|||||| uacaacagucuGUUUGAAUUUg 2 12 186 207 [rn4:17:15644827-15644848:+] 0.6415 127 6 -11.94 -0.1695 MIMAT0004735 rno-miR-139-3p 290997 Uimc1 gagguugucccggcgCAGAGGu |||||| ucauuaauuauugugGUCUCCa 2 8 53 74 [rn4:17:15644694-15644715:+] 0.6415 120 6 -16.28 -0.1420 MIMAT0000893 rno-miR-290 290997 Uimc1 uuuuucacggggguauCAAACUc |||||| uguuuuacaacagucuGUUUGAa 2 8 181 203 [rn4:17:15644822-15644844:+] 0.6415 120 6 -7.86 -0.1892 MIMAT0004743 rno-miR-300-5p 290997 Uimc1 uguuuccUAUUGGAGAGAAGUu |||| |||||||| auguuuuAUAAGAUCUCUUCAg 2 16 140 161 [rn4:17:15644781-15644802:+] 0.6415 159 7 -15.01 -1.0730 MIMAT0003113 rno-miR-489 290997 Uimc1 cgACGGUAUAUACACUAC-AGUAa ||::: || || ||| |||| guUGUUGGAUUGGUCAUGUUCAUu 2 22 34 57 [rn4:17:15644675-15644698:+] 0.6415 125 0 -12.67 -1.1872 MIMAT0003174 rno-miR-540 290997 Uimc1 gguccuagCUGGAGACUGGa || :||||||| ugcugugaGAGUUCUGACCc 2 13 78 97 [rn4:17:15644719-15644738:+] 0.6415 148 7 -18.23 -0.5035 MIMAT0003202 rno-miR-382* 290997 Uimc1 uucaCAACAGGCACUUACUAa | || || ||||||| ggagGAUGACC-AGAAUGAUu 2 18 14 33 [rn4:17:15644655-15644674:+] 0.6415 147 7 -11.98 -0.8000 MIMAT0005283 rno-miR-872* 290997 Uimc1 ucCUCCGAUGACGUUAUCAAgu || :|:|| |||||| uuGAAUUUGCU--UAUAGUUaa 3 21 199 218 [rn4:17:15644840-15644859:+] 0.6415 125 0 -8.49 -0.5377 MIMAT0005286 rno-miR-878 290997 Uimc1 agaugggucauaccaCAGUACg |||||| auuguuguuggauugGUCAUGu 2 8 31 52 [rn4:17:15644672-15644693:+] 0.6415 120 6 -12.32 -0.1392 MIMAT0005328 rno-miR-673 290997 Uimc1 gagguuccuggccuCGACACUc ||||||| guggucuccaguuuGCUGUGAg 2 9 65 86 [rn4:17:15644706-15644727:+] 0.6415 140 7 -22.20 -0.8495 MIMAT0005328 rno-miR-673 290997 Uimc1 gagguuccuggccucGACACUc |||||| gaucucuucagacaaCUGUGAa 2 8 151 172 [rn4:17:15644792-15644813:+] 0.6415 120 6 -14.63 -0.3035 MIMAT0012833 rno-miR-582 290997 Uimc1 ucaUUGACCAACUUGUUGACAu | || | :|||||||| aagAUCUCUUCAGACAACUGUg 2 20 149 170 [rn4:17:15644790-15644811:+] 0.6415 151 7 -13.13 -1.1179 MIMAT0012837 rno-miR-632 290997 Uimc1 aggccguccuuuGUCUGUg |||||| auaagaucucuuCAGACAa 2 8 147 165 [rn4:17:15644788-15644806:+] 0.6415 120 6 -9.06 -0.1828 MIMAT0012847 rno-miR-293 290997 Uimc1 guuuCACAGUG-UGU----CAAACUca || |:|| ||| |||||| uucuGUUUUACAACAGUCUGUUUGAau 3 19 178 204 [rn4:17:15644819-15644845:+] 0.6415 128 0 -10.13 -0.1283 MIMAT0012850 rno-miR-465 290997 Uimc1 guguggucguggcaAGAUUUAu |:||||| gcuuauaguuaaaaUUUAAAUa 2 9 207 228 [rn4:17:15644848-15644869:+] 0.6415 124 0 -7.12 -0.2132 MIMAT0004650 rno-miR-340-5p 290997 Uimc1 uuAGUCAGAGUAACGAAAUAUu | | |:|:| ||:|||||| ccUGAUUUUUA-UGUUUUAUAa 2 21 130 150 [rn4:17:15644771-15644791:+] 0.6415 146 6 -9.67 -0.1333 MIMAT0004650 rno-miR-340-5p 290997 Uimc1 uuagucaGAGUAACGAAAUAUu :|:|| ||||:|| aaauauaUUUAU--CUUUGUAu 2 16 224 243 [rn4:17:15644865-15644884:+] 0.6415 128 0 -5.78 -0.1190 MIMAT0000792 rno-miR-23a 290997 Uimc1 ccUUUAGGGA---CCGUU-ACACUa |:|||:|| | ||| ||||| uaAGAUCUCUUCAGACAACUGUGAa 2 20 148 172 [rn4:17:15644789-15644813:+] 0.6415 126 0 -13.73 -1.2629 MIMAT0000793 rno-miR-23b 290997 Uimc1 ccaUUAGGGA---CCGUU-ACACUa :|||:|| | ||| ||||| uaaGAUCUCUUCAGACAACUGUGAa 2 19 148 172 [rn4:17:15644789-15644813:+] 0.6415 121 0 -12.50 -1.2629 MIMAT0000798 rno-miR-27b 290997 Uimc1 cgucuuGAA-UC-GGUGACACUu ||| || | ||||||| agaucuCUUCAGACAACUGUGAa 2 16 150 172 [rn4:17:15644791-15644813:+] 0.6415 149 7 -16.70 -1.2691 MIMAT0000799 rno-miR-27a 290997 Uimc1 cgccuuGAA-UC-GGUGACACUu ||| || | ||||||| agaucuCUUCAGACAACUGUGAa 2 16 150 172 [rn4:17:15644791-15644813:+] 0.6415 149 7 -15.83 -1.2691 MIMAT0000804 rno-miR-30c 290997 Uimc1 cgACUCUCA-CAUCCUAC-AAAUGu || || | ||| || ||||| acUGUGAAUAGUAUUCUGUUUUACa 2 22 165 189 [rn4:17:15644806-15644830:+] 0.6415 120 0 -11.46 -1.1212 MIMAT0000834 rno-miR-128 290997 Uimc1 uuucucuggccaagUGACACu |||||| gaucucuucagacaACUGUGa 2 8 151 171 [rn4:17:15644792-15644812:+] 0.6415 120 6 -13.76 -0.2528 MIMAT0000844 rno-miR-138 290997 Uimc1 gccGGAC--UAAGUGUUGUGGUCGa |||| :||: || ||||||| gacCCUGUUGUUUUCACCACCAGCg 2 21 93 117 [rn4:17:15644734-15644758:+] 0.6415 163 7 -22.91 -0.6298 MIMAT0000851 rno-miR-145 290997 Uimc1 uccCUA-AGGACCCUUUUGAC-CUg ||| ||:| || ||||| || uaaGAUCUCUUCAGACAACUGUGAa 2 21 148 172 [rn4:17:15644789-15644813:+] 0.6415 127 0 -13.00 -1.2619 MIMAT0000858 rno-miR-181a 290997 Uimc1 ugAGUGG-CUGUCGCAACUUA-CAa || :| |||| | ||||| || ucUCUUCAGACAACUGUGAAUAGUa 2 22 153 177 [rn4:17:15644794-15644818:+] 0.6415 124 0 -14.56 -1.2162 MIMAT0000859 rno-miR-181b 290997 Uimc1 ugGGUGGCUGUCGUUACUUA-CAa |: | |||| | :||||| || cuCUUCAGACAACUGUGAAUAGUa 2 22 154 177 [rn4:17:15644795-15644818:+] 0.6415 129 0 -13.40 -1.2162 MIMAT0000873 rno-miR-200c 290997 Uimc1 gguaguaaugggccGUCAUAAu :|||||| cagacaacugugaaUAGUAUUc 2 9 159 180 [rn4:17:15644800-15644821:+] 0.6415 124 6 -7.55 -0.1269 MIMAT0000875 rno-miR-200b 290997 Uimc1 caguaguaaUGGUCC--GUCAUAAu ||:: | :|||||| cuucagacaACUGUGAAUAGUAUUc 2 15 156 180 [rn4:17:15644797-15644821:+] 0.6415 125 6 -8.68 -0.1269 MIMAT0000896 rno-miR-292-5p 290997 Uimc1 guuUUCUCGGGGGUCAAACUca || ||:|: |||||| uacAACAGUCU---GUUUGAau 3 20 186 204 [rn4:17:15644827-15644845:+] 0.6415 127 0 -8.84 -0.1165 MIMAT0001538 rno-miR-429 290997 Uimc1 ugccgUAAUGGUCUGUCAUAAu | |:: | |:|||||| agacaACUGUGA-AUAGUAUUc 2 18 160 180 [rn4:17:15644801-15644821:+] 0.6415 131 6 -7.90 -0.1269 MIMAT0003193 rno-miR-494 290997 Uimc1 uccaaagggcACAUACAAAGu | |||||||: cacccugauuUUUAUGUUUUa 2 12 127 147 [rn4:17:15644768-15644788:+] 0.6415 131 0 -12.83 -0.2884 MIMAT0003194 rno-miR-376c 290997 Uimc1 ugcACUUUA---AAGGAGAUACAa | |||| ||: ||| ||| aauUUAAAUAUAUUUAUCUUUGUa 2 19 219 242 [rn4:17:15644860-15644883:+] 0.6415 121 0 -4.52 -0.1016 MIMAT0003199 rno-miR-381 290997 Uimc1 cucucGAACGGGAACAUAu :|| :|:|||||| auauaUUUAUCUUUGUAUg 2 15 226 244 [rn4:17:15644867-15644885:+] 0.6415 138 6 -12.22 -0.5139 MIMAT0005299 rno-miR-181d 290997 Uimc1 ugGGUGGCUGUUGUUACUUA-CAa |: | |||||| :||||| || cuCUUCAGACAACUGUGAAUAGUa 2 22 154 177 [rn4:17:15644795-15644818:+] 0.6415 137 0 -17.78 -1.2147

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G059231 Uimc1 Rattus norvegicus 290997

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Uimc1 RAID00175133 rno-miR-429 miRNA MIMAT0001538 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID00498488 rno-miR-181b-5p miRNA MIMAT0000859 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID00730531 rno-miR-582-5p miRNA MIMAT0012833 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID00965670 rno-miR-23b-3p miRNA MIMAT0000793 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID01096778 rno-miR-667-5p miRNA MIMAT0017369 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID01306750 rno-miR-138-5p miRNA MIMAT0000844 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID01314046 rno-miR-27b-3p miRNA MIMAT0000798 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID01421765 rno-miR-145-5p miRNA MIMAT0000851 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID01779030 rno-miR-376c-3p miRNA MIMAT0003194 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID01827130 rno-miR-200b-3p miRNA MIMAT0000875 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID01936786 rno-miR-128-3p miRNA MIMAT0000834 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID01998602 rno-miR-200c-3p miRNA MIMAT0000873 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID02069279 rno-miR-30c-5p miRNA MIMAT0000804 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID02082766 rno-miR-381-3p miRNA MIMAT0003199 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID02251116 rno-miR-181a-5p miRNA MIMAT0000858 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID02513023 rno-miR-181d-5p miRNA MIMAT0005299 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID02710462 rno-miR-23a-3p miRNA MIMAT0000792 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID03164955 rno-miR-27a-3p miRNA MIMAT0000799 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID03422664 rno-miR-494-3p miRNA MIMAT0003193 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID03669050 rno-miR-292-5p miRNA MIMAT0000896 Uimc1 mRNA 290997 Prediction 0.1828 Uimc1 RAID03795090 rno-miR-340-5p miRNA MIMAT0004650 Uimc1 mRNA 290997 Prediction 0.1828