DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000550 rno-miR-323 282835 Wrnip1 ucuccagcuggcacAUUACAc |||||| cagcuuugugcaauUAAUGUu 2 8 216 236 [rn4:17:37982304-37982324:-] 0.6121 120 6 -6.80 -0.1222 MIMAT0000550 rno-miR-323 282835 Wrnip1 ucuccagcuggcacAUUACAc |||||| uaguauuuaagucaUAAUGUc 2 8 260 280 [rn4:17:37982260-37982280:-] 0.6121 120 6 -3.65 -0.2096 MIMAT0004639 rno-miR-325-3p 282835 Wrnip1 aacuauccuccacgaGUUAUUu |||||| aaaggucuuaugagcCAAUAAa 2 8 411 432 [rn4:17:37982108-37982129:-] 0.6121 120 6 -9.55 -0.1017 MIMAT0004655 rno-miR-345-3p 282835 Wrnip1 agAGGUCUGGGGAUCAAGUCcc |:|| | ::|| |||||| auUUCAAAAUUCU-GUUCAGua 3 21 281 301 [rn4:17:37982239-37982259:-] 0.6121 138 0 -15.10 -0.1501 MIMAT0000604 rno-miR-350 282835 Wrnip1 cacuuucacauacccgaAACACUu |||||| gguaagagaaaauguaaUUGUGAu 2 8 348 371 [rn4:17:37982169-37982192:-] 0.6121 120 6 -10.27 -0.2159 MIMAT0004705 rno-let-7b* 282835 Wrnip1 cccuuccgucauccaACAUAUc |||||| uuuucuuuuaaaaaaUGUAUAu 2 8 309 330 [rn4:17:37982210-37982231:-] 0.6121 120 6 -3.03 -0.1098 MIMAT0004710 rno-miR-17-3p 282835 Wrnip1 gguguuCACGGAA--GUGACGUca ||| :|| :|||||| guaauuGUGAUUUAAUACUGCAua 3 17 361 384 [rn4:17:37982156-37982179:-] 0.6121 131 0 -11.81 -0.2086 MIMAT0003153 rno-miR-24-1* 282835 Wrnip1 gacUAUAGUCGAGUCAUCCGug || || |:||||||||| aaaAU-UCUGUUCAGUAGGCuu 3 20 286 306 [rn4:17:37982234-37982254:-] 0.6121 149 0 -20.48 -0.2779 MIMAT0005441 rno-miR-24-2* 282835 Wrnip1 ugacaAAGUCGAGUCAUCCGug ||| |:||||||||| caaaaUUCUGUUCAGUAGGCuu 3 18 285 306 [rn4:17:37982234-37982255:-] 0.6121 153 0 -22.31 -0.2755 MIMAT0004723 rno-miR-34c* 282835 Wrnip1 ggaccgacacACCAAUCACUAa || ||||||| gauuuaauacUGCAUAGUGAUu 2 13 369 390 [rn4:17:37982150-37982171:-] 0.6121 144 7 -10.53 -1.1218 MIMAT0005446 rno-miR-219-2-3p 282835 Wrnip1 ugucuACAGGUCGGUGUUAAga || :||::|||||| uauucUGGGUAGUUACAAUUgg 3 18 328 349 [rn4:17:37982191-37982212:-] 0.6121 137 0 -12.27 -0.1686 MIMAT0001320 rno-miR-421 282835 Wrnip1 guUGUUUGUAAAUUACUCCGg :|||| :| | ||||| | auGCAAAGGUCUUAUGAGCCa 2 20 407 427 [rn4:17:37982113-37982133:-] 0.6121 131 0 -13.57 -0.1381 MIMAT0003113 rno-miR-489 282835 Wrnip1 cgACGGUAU-AUA----C---ACUACAGUAa ||:|||| ||| | | ||||||| uuUGUCAUAGUAUUUAAGUCAUAAUGUCAUu 2 22 253 283 [rn4:17:37982257-37982287:-] 0.6121 146 7 -15.04 -1.2465 MIMAT0003175 rno-miR-543* 282835 Wrnip1 ucuucacguggcgcUUACAAa |||||| agcuuugugcaauuAAUGUUa 2 8 217 237 [rn4:17:37982303-37982323:-] 0.6121 120 6 -9.43 -0.2323 MIMAT0003202 rno-miR-382* 282835 Wrnip1 uucACAACAGGCAC-UUACUAa || ||:||| |||||| auuUGCACUCUGUGCAAUGAUu 2 19 174 195 [rn4:17:37982345-37982366:-] 0.5378 126 6 -14.09 -0.6911 MIMAT0003212 rno-miR-20b-3p 282835 Wrnip1 ggucuuCAC--GAGUGUGACGUca ||| :| |:|||||| guaauuGUGAUUUAAUACUGCAua 3 17 361 384 [rn4:17:37982156-37982179:-] 0.6121 131 0 -12.62 -0.2086 MIMAT0003382 rno-miR-664 282835 Wrnip1 auccgacccCUCAUUUAC-UUAu ||| ||||| ||| aauugguaaGAGAAAAUGUAAUu 2 14 344 366 [rn4:17:37982174-37982196:-] 0.6121 121 0 -11.44 -0.9643 MIMAT0005286 rno-miR-878 282835 Wrnip1 agAUGGG-UCA-UACCACAGUAcg ||::: ||| || |||||| agUAUUUAAGUCAUAAUGUCAUuu 3 21 261 284 [rn4:17:37982256-37982279:-] 0.6121 134 0 -8.78 -0.1519 MIMAT0005286 rno-miR-878 282835 Wrnip1 agaugggucAUACCACAGUAcg ||| |||||| ggaauuaucUAUUUUGUCAUag 3 14 241 262 [rn4:17:37982278-37982299:-] 0.6121 129 0 -10.81 -0.3653 MIMAT0005322 rno-miR-532-5p 282835 Wrnip1 uguCAGGAU-GUGAGUUCCGUAc ||| || :|:|:||| ||| uuuGUCAUAGUAUUUAAGUCAUa 2 20 253 275 [rn4:17:37982265-37982287:-] 0.6121 134 0 -11.13 -0.1202 MIMAT0005333 rno-miR-742 282835 Wrnip1 aaauggguuguaccaCCGAAAg |||||| aaauucuguucaguaGGCUUUu 2 8 287 308 [rn4:17:37982232-37982253:-] 0.6121 120 6 -12.35 -0.2870 MIMAT0012822 rno-miR-202 282835 Wrnip1 uuucuucaUAU-ACGUAUC-CUu ||| ||||||| || gugauuuaAUACUGCAUAGUGAu 2 14 367 389 [rn4:17:37982151-37982173:-] 0.6121 120 0 -10.51 -0.9642 MIMAT0012824 rno-miR-513 282835 Wrnip1 uacUUUC-UGUGGAAGAACACUu |:|| | |: | |||||| guaAGAGAAAAUGUAAUUGUGAu 2 20 349 371 [rn4:17:37982169-37982191:-] 0.6121 122 6 -10.15 -0.2119 MIMAT0012848 rno-miR-294 282835 Wrnip1 ucUAUCCC---GGAGGUAAAACuc ||| || : ||:|||||| uuAUAAGGAAUUAUCUAUUUUGuc 3 20 235 258 [rn4:17:37982282-37982305:-] 0.6121 134 0 -12.44 -0.2454 MIMAT0012856 rno-miR-759 282835 Wrnip1 caGUUUUAAC------AAACGUGAGACg ::|||||| ||||||||||| auUGAAAUUGUGUUCAUUUGCACUCUGu 2 21 159 186 [rn4:17:37982354-37982381:-] 0.5378 163 7 -21.66 -0.5423 MIMAT0012860 rno-miR-496 282835 Wrnip1 cucUAACCGGUACAUUAUGAgu ||| |: || ||||||| guaAUU-GUGAUUUAAUACUgc 3 20 361 381 [rn4:17:37982159-37982179:-] 0.6121 141 0 -8.50 -0.1554 MIMAT0000552 rno-miR-301a 282835 Wrnip1 cgaAACUGU--UAUGA-U-AACGUGAc |||| | :|::| | ||||||| ccaUUGAAAUUGUGUUCAUUUGCACUc 2 21 157 183 [rn4:17:37982357-37982383:-] 0.5378 149 7 -12.17 -0.7284 MIMAT0000611 rno-miR-135b 282835 Wrnip1 aguGUAUCCUUACUUUUCGGUAu ||||| | | |||:||| uguCAUAGUAUU--UAAGUCAUa 2 21 255 275 [rn4:17:37982265-37982285:-] 0.6121 137 0 -13.61 -0.1190 MIMAT0000788 rno-miR-19b 282835 Wrnip1 agucaaAACGUACCUAAACGUGu |||::| |||||||| uugaaaUUGUGUUCAUUUGCACu 2 18 160 182 [rn4:17:37982358-37982380:-] 0.5378 161 7 -12.13 -0.6764 MIMAT0000789 rno-miR-19a 282835 Wrnip1 agucaaAACGUAUCUAAACGUGu |||::| |||||||| uugaaaUUGUGUUCAUUUGCACu 2 18 160 182 [rn4:17:37982358-37982380:-] 0.5378 161 7 -12.93 -0.6764 MIMAT0000791 rno-miR-22 282835 Wrnip1 ugucaagaaGUUGACCGUCGAa :| ||||||||| uuaugaaaaUACCUGGCAGCUu 2 14 200 221 [rn4:17:37982319-37982340:-] 0.6121 153 7 -18.05 -0.9662 MIMAT0000794 rno-miR-24 282835 Wrnip1 gacaaggacgacuugACUCGGu |||||| uaugcaaaggucuuaUGAGCCa 2 8 406 427 [rn4:17:37982113-37982134:-] 0.6121 120 6 -14.39 -0.3626 MIMAT0000795 rno-miR-25 282835 Wrnip1 agucuggcUCUGUUCACGUUAc || : ||||||| uaccuggcAGCUUUGUGCAAUu 2 15 209 230 [rn4:17:37982310-37982331:-] 0.6121 142 7 -14.75 -1.1977 MIMAT0000795 rno-miR-25 282835 Wrnip1 agucuggcucuguuCACGUUAc ||||||| uucauuugcacucuGUGCAAUg 2 9 171 192 [rn4:17:37982348-37982369:-] 0.5378 140 7 -15.02 -0.5432 MIMAT0000811 rno-miR-32 282835 Wrnip1 acguUGAAUCAUU---ACACGUUAu || |:| |: |||||||| aaauACCUGGCAGCUUUGUGCAAUu 2 19 206 230 [rn4:17:37982310-37982334:-] 0.6121 149 7 -18.14 -1.1977 MIMAT0000811 rno-miR-32 282835 Wrnip1 acguugaaucauuACACGUUAu |||||||| uucauuugcacucUGUGCAAUg 2 10 171 192 [rn4:17:37982348-37982369:-] 0.5378 145 7 -13.31 -0.5361 MIMAT0000816 rno-miR-92a 282835 Wrnip1 guccggcccuguuCACGUUAu ||||||| ucauuugcacucuGUGCAAUg 2 9 172 192 [rn4:17:37982348-37982368:-] 0.5378 140 7 -10.81 -0.5396 MIMAT0000816 rno-miR-92a 282835 Wrnip1 guccggcccuguuCACGUUAu ||||||| accuggcagcuuuGUGCAAUu 2 9 210 230 [rn4:17:37982310-37982330:-] 0.6121 140 7 -14.61 -1.1977 MIMAT0000818 rno-miR-96 282835 Wrnip1 ucGUUUUUACACGAUCACGGUUu | || || :| ||||||: gaCCAACAU---UUUGUGCCAGa 2 22 90 109 [rn4:17:37982431-37982450:-] 0.5378 129 0 -13.74 -0.1474 MIMAT0000836 rno-miR-130a 282835 Wrnip1 uacgggAAAAUUGUAACGUGAc | || |: ||||||| aaauugUGUUCAU-UUGCACUc 2 17 163 183 [rn4:17:37982357-37982377:-] 0.5378 146 7 -10.38 -0.6847 MIMAT0000837 rno-miR-130b 282835 Wrnip1 uacgggaAAGUAGUAACGUGAc ||||| ||||||| aauugugUUCAU--UUGCACUc 2 16 164 183 [rn4:17:37982357-37982376:-] 0.5378 152 7 -11.70 -0.6810 MIMAT0000841 rno-miR-135a 282835 Wrnip1 aguGUAUCCUUAUUUUUCGGUAu ||||| | | |||:||| uguCAUAGUAUU--UAAGUCAUa 2 21 255 275 [rn4:17:37982265-37982285:-] 0.6121 137 0 -14.31 -0.1190 MIMAT0000850 rno-miR-144 282835 Wrnip1 ucauGUAGUAGA-UAUGACau ::| ||:| |||||| uaauUGUGAUUUAAUACUGca 3 17 362 382 [rn4:17:37982158-37982178:-] 0.6121 131 0 -8.30 -0.2699 MIMAT0000855 rno-miR-153 282835 Wrnip1 cuaGUGAAAACACUGAUACGUu :|:|||| | |||||| gggUAUUUUU-UUUAUAUGCAa 2 20 392 412 [rn4:17:37982128-37982148:-] 0.6121 125 6 -11.59 -0.1680 MIMAT0000860 rno-miR-183 282835 Wrnip1 ucacuuaagaugguCACGGUau |||||| uagaccaacauuuuGUGCCAga 3 9 88 109 [rn4:17:37982431-37982452:-] 0.5378 120 0 -11.43 -0.1503 MIMAT0000863 rno-miR-186 282835 Wrnip1 ucggguuuuccucuuAAGAAAc |||||| ucaguaggcuuuuuuUUCUUUu 2 8 296 317 [rn4:17:37982223-37982244:-] 0.6121 120 6 -8.81 -0.2536 MIMAT0000873 rno-miR-200c 282835 Wrnip1 ggUAG-UAAUGGGCCGUCAUAAu ||| ||| : : :|||||| uuAUCUAUUUUGUCAUAGUAUUu 2 21 245 267 [rn4:17:37982273-37982295:-] 0.6121 135 6 -12.52 -0.1510 MIMAT0000875 rno-miR-200b 282835 Wrnip1 caGUAGUAAUGGUCCGUCAUAAu :||: ||::|| :|||||| ucUAUU-UUGUCA--UAGUAUUu 2 22 248 267 [rn4:17:37982273-37982292:-] 0.6121 136 6 -9.99 -0.1400 MIMAT0000876 rno-miR-203 282835 Wrnip1 gaucacCAGGAUU--UGUAAAGUg ||| ||| ||||||| auuuaaGUCAUAAUGUCAUUUCAa 2 17 264 287 [rn4:17:37982253-37982276:-] 0.6121 151 7 -11.31 -1.2987 MIMAT0000876 rno-miR-203 282835 Wrnip1 gaucACCAGG--AUUU--GUAAAGUg || || |||| :|||||| cuuaUGAGCCAAUAAAACUAUUUCAa 2 19 417 442 [rn4:17:37982098-37982123:-] 0.6121 132 6 -9.98 -0.1093 MIMAT0000903 rno-miR-320 282835 Wrnip1 agcgggagaguuggGUCGAAAa ||||||| augaaaauaccuggCAGCUUUg 2 9 202 223 [rn4:17:37982317-37982338:-] 0.6121 140 7 -10.34 -0.5372 MIMAT0001534 rno-miR-448 282835 Wrnip1 uaCCCUGUAGGAUGUAUACGUu || |: |::| :||||||| ugGGUAUUUUUUUUAUAUGCAa 2 21 391 412 [rn4:17:37982128-37982149:-] 0.6121 160 7 -19.61 -1.2449 MIMAT0001538 rno-miR-429 282835 Wrnip1 ugccGUAAUGGUCUGUCAUAAu :||| : |:|||||| uaucUAUUUUGUCAUAGUAUUu 2 19 246 267 [rn4:17:37982273-37982294:-] 0.6121 134 6 -8.36 -0.1510 MIMAT0003199 rno-miR-381 282835 Wrnip1 cuCUCGAAC-GGGAACAUAu |||: | : ||||||| auGAGUAGGAUGCUUGUAUc 2 18 11 30 [rn4:17:37982510-37982529:-] 0.6400 144 7 -11.74 -1.0525 MIMAT0003210 rno-miR-363 282835 Wrnip1 auGUCUACCUAUGGCACGUUAa || || | |:||||||| uuCAUUUGCACUCUGUGCAAUg 2 21 171 192 [rn4:17:37982348-37982369:-] 0.5378 156 7 -14.05 -0.5290 MIMAT0003210 rno-miR-363 282835 Wrnip1 augucuACCUAUG--GCACGUUAa ||| :| :||||||| aauaccUGGCAGCUUUGUGCAAUu 2 17 207 230 [rn4:17:37982310-37982333:-] 0.6121 143 7 -15.32 -1.1977 MIMAT0005304 rno-miR-301b 282835 Wrnip1 cgaAACUGUUAU---GGU-AACGUGAc |||| | |: :|| ||||||| ccaUUGAAAUUGUGUUCAUUUGCACUc 2 21 157 183 [rn4:17:37982357-37982383:-] 0.5378 150 7 -12.55 -0.7284 MIMAT0005311 rno-miR-410 282835 Wrnip1 ugucCGGUAGACACAAUAUaa || ||: ||||||| uuguGCAAUUAAUGUUAUAag 3 18 221 241 [rn4:17:37982299-37982319:-] 0.6121 137 0 -5.81 -0.1379 MIMAT0005314 rno-miR-425 282835 Wrnip1 aguugcccUCACUAGCACAGUAa ||| || |||||| aguauuuaAGUCAUAAUGUCAUu 2 16 261 283 [rn4:17:37982257-37982279:-] 0.6121 127 6 -10.25 -0.1840 MIMAT0005314 rno-miR-425 282835 Wrnip1 aguugcccucacuagcACAGUAa |||||| aaggaauuaucuauuuUGUCAUa 2 8 239 261 [rn4:17:37982279-37982301:-] 0.6121 120 6 -8.34 -0.4381 MIMAT0005340 rno-miR-92b 282835 Wrnip1 ccuccggcccugcuCACGUUAu ||||||| uucauuugcacucuGUGCAAUg 2 9 171 192 [rn4:17:37982348-37982369:-] 0.5378 140 7 -10.16 -0.5396 MIMAT0005340 rno-miR-92b 282835 Wrnip1 ccuccggcccugcuCACGUUAu ||||||| uaccuggcagcuuuGUGCAAUu 2 9 209 230 [rn4:17:37982310-37982331:-] 0.6121 140 7 -13.59 -1.1977

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G101687 Wrnip1 Rattus norvegicus 282835

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Wrnip1 rno-miR-130a 167 194 -UACGGGAAAAU-UGUA--ACGUGAC- :||::| |||: || |||| || UGUGUUCAUUUGCACUCUGUGCAAUGA Wrnip1 rno-miR-130b 166 184 UACGGGAAAGUAGUAACGUGAC ||: |||||: |||||| UUGUG--UUCAUU--UGCACUC Wrnip1 rno-miR-136 91 134 AGGUAGUAG--------UUUUG------------UUUACCUCA ||| |||: :|||| |:|||||| ACCAACAUUUUGUGCCAGAAACUAAGGGUUCCAUAGAUGGAGG Wrnip1 rno-miR-153 178 201 AGUGAAA-AC---ACUGAUACGUU |||| || |||:||||| GCACUCUGUGCAAUGAUUAUGCU- Wrnip1 rno-miR-189 290 306 UGACUAUAGUCGAGUCAUCCGUG || |:||||||||| ------UUCUGUUCAGUAGGCU- Wrnip1 rno-miR-19a 165 183 AGUCAAAACGUAUCUAAACGUGU |||::| |||||||| -----AUUGUGUUCAUUUGCACU Wrnip1 rno-miR-19b 165 183 AGUCAAAACGUACCUAAACGUGU |||::| |||||||| -----AUUGUGUUCAUUUGCACU Wrnip1 rno-miR-205 105 135 -GUCU--GAGGCCACC-----UUACUUCCU |||| || || :|||:||| CCAGAAACUAAGGGUUCCAUAGAUGGAGGU Wrnip1 rno-miR-207 52 84 UUCCCU----CCUCU-----CGGUCCUCU-UCG- ||| |||| ||| ||:|| ||: --UGGAUCUUGGAGUUGGUUGCCUGGGGAAAGUU Wrnip1 rno-miR-20b* 128 147 GUCUUCACGAGUGUGACGUCA :||:||| |:|| ||| UGGAGGUGGUUACUU--CAGC Wrnip1 rno-miR-22 208 223 UGUCAAGAAGUUGACCGUCGAA- :| |||||||||| --------AUACCUGGCAGCUUU Wrnip1 rno-miR-224 376 394 AUUUGCCUUGGUG-AUCACUGAAC- ||::| ||||||:||| -------UACUGCAUAGUGAUUUGG Wrnip1 rno-miR-30a-5p 118 142 GAAGGUC---AGCUCCUACAAAUGU ||||| | |||| || |||| GUUCCAUAGAUGGAGG-UGGUUACU Wrnip1 rno-miR-30d 118 142 GAAGG--UCAGCCCCUACAAAUGU |||| || :|| |:|| |||| GUUCCAUAGAUGGAGGUGGUUACU Wrnip1 rno-miR-31 13 44 GUCGA--UACGGUCGUAGAA-------CGGA ||: ||||: |:||||| ||| GAGUAGGAUGCUUGUAUCUUGAGGAAGGCCA Wrnip1 rno-miR-32 214 231 -CGUUGAAUCAUUACACGUUAU |||:||| |||||||| GGCAGCUU-----UGUGCAAUU Wrnip1 rno-miR-326 49 79 -UGACCU----CCUU--CC--CGGGUCUCC |||||| |||: || |||::|:| CACUGGAUCUUGGAGUUGGUUGCCUGGGGA Wrnip1 rno-miR-331 55 79 AAGAUCCUAU-CCG--GGUCCCCG ||| ||| ||: || |||| AUCUUGGAGUUGGUUGCCUGGGGA Wrnip1 rno-miR-337 35 69 -UUUCCG-----UAGU-AUAU----CCUCGACUU :||||| :||| |: ||||:||: GGAAGGCCAAAAGUCACUGGAUCUUGGAGUUGGU Wrnip1 rno-miR-338 38 78 AGUUG--UUUUAGUGACU--------------AC-GACCU ::| |||:||||||: || ||||: -AGGCCAAAAGUCACUGGAUCUUGGAGUUGGUUGCCUGGGG Wrnip1 rno-miR-340 38 64 -CCGAUAUUUCAUUGACUCU---GCCU- ||| ||||| |||| || :||| AGGCCA-AAAGUCACUG-GAUCUUGGAG Wrnip1 rno-miR-344 34 59 UGCCAGUCCGAAACC----GAUCUAGU || |||| ||:|||| -AGGA-AGGCCAAAAGUCACUGGAUCU Wrnip1 rno-miR-350 202 227 CACUUUCACAUACC--CGAAACACUU ||||| ||| |||||||| AUGAAAAUACCUGGCAGCUUUGUGC- Wrnip1 rno-miR-448 390 414 UACCCUGUAGGAU--GUAUACGUU- |||| :||::| :|||||||| UUGGG-UAUUUUUUUUAUAUGCAAA Wrnip1 rno-miR-136 104 133 aGGUAGUAGUUU-------UGUUUACCUCa ||| | | || |:|:|||||| gCCAGAAACTAAGGGTTCCATAGATGGAGg Wrnip1 rno-miR-153 172 190 AGUGAAAAC-ACUGAUACGUU ||| |||| ||:||||| TCA--TTTGCACTCTGTGCAA Wrnip1 rno-miR-189 284 306 ugacuauAGUCGAGUCAUCCGug || |:||||||||| tcaaaatTCTGTTCAGTAGGCtt Wrnip1 rno-miR-205 114 134 gUCUGAGGCCACCUUACUUCCu ||: |:| | | |||:||| aAGGGTTCCATAG-ATGGAGGt Wrnip1 rno-miR-207 57 81 uucCCUC--CUCUCGGUCCUCUUcg |||| |: ||| ||:||| cttGGAGTTGGTTGCCTGGGGAAag Wrnip1 rno-miR-22 200 221 ugucaagaagUUGACCGUCGAA | |||||||||| ttatgaaaatACCTGGCAGCTT Wrnip1 rno-miR-224 369 392 auuugccuUGGUG-AUCACUGAAC ||::| ||||||:||| gatttaatACTGCATAGTGATTTG Wrnip1 rno-miR-25 206 230 agUCUGGCUCUGUU----CACGUUAc | ||| |:||: ||||||| aaATACC-TGGCAGCTTTGTGCAATt Wrnip1 rno-miR-31 15 36 gucgaUACGGUCGUAGAACgga ||||: |:|||||| gtaggATGCTTGTATCTTGagg Wrnip1 rno-miR-32 215 230 CGUUGAAUCAUUACACGUUAu |||:||| |||||||| GCAGCTT-----TGTGCAATt Wrnip1 rno-miR-326 50 78 UGACCU----CCUU--CC--CGGGUCUCc |||||| |||: || |||::|:| ACTGGATCTTGGAGTTGGTTGCCTGGGGa Wrnip1 rno-miR-337 44 68 UUUCCGUAG--UAUAUCCUCGACuu |||| || : || | ||||:|| AAAGTCACTGGATCTTGGAGTTGgt Wrnip1 rno-miR-340 39 68 CCGAUAUUUCAUUGA--------CUCUGCCu ||| | ||||| ||| ||| :|| GGCCA-AAAGTCACTGGATCTTGGAGTTGGt Wrnip1 rno-miR-344 33 58 ugCCAGUCCG----AAACCGAUCUAGu || |||| | ||:|||| gaGG-AAGGCCAAAAGTCACTGGATCt Wrnip1 rno-miR-350 202 227 cACUUUCACAUACC--CGAAACACuu ||||| | ||| |||||||| aTGAAAATACCTGGCAGCTTTGTGca Wrnip1 rno-miR-448 390 412 uACCC-UGUAGGAUGUAUACGUU |||| |: |::| :|||||||| tTGGGTATTTTTTTTATATGCAA Wrnip1 rno-miR-130a 176 183 ---------------------------UACGGGAAAAUUGUAACGUGAC :||::| ||||||| UUCAGCUAAAUGUGUACCAUUGAAAUUGUGUUCAU------UUGCACUC Wrnip1 rno-miR-130b 176 183 -----------UACG-GGA-----------AAGUAGUAACGUGAC :||: || ||||| ||||||| UUCAGCUAAAUGUGUACCAUUGAAAUUGUGUUCAU--UUGCACUC Wrnip1 rno-miR-19a 175 182 AGUCAA--------------------AACGUAUCUAAACGUGU |||::| |||||||| CUUCAGCUAAAUGUGUACCAUUGAAAUUGUGUUCAUUUGCACU Wrnip1 rno-miR-19b 175 182 AGUCAA--------------------AACGUACCUAAACGUGU |||::| |||||||| CUUCAGCUAAAUGUGUACCAUUGAAAUUGUGUUCAUUUGCACU Wrnip1 rno-miR-22 214 221 UGUCAAGAAGUU---------------------GACCGUCGAA |||||||||| CACUCUGUGCAAUGAUUAUGCUUAUGAAAAUACCUGGCAGCUUU Wrnip1 rno-miR-25 223 230 AGUC------------------UGGCUCUGUU----CACGUUAC ||| |:||: ||||||| CAAUGAUUAUGCUUAUGAAAAUACCU-GGCAGCUUUGUGCAAUU Wrnip1 rno-miR-32 223 230 ---------------------------CGUUGAAUCAUUACACGUUAU |||:||| |||||||| CAAUGAUUAUGCUUAUGAAAAUACCUGGCAGCUU-----UGUGCAAUU Wrnip1 rno-miR-448 405 412 U--------------------ACCCUGUAGGAU--GUAUACGUU |||| :||::| :|||||||| AUUUAAUACUGCAUAGUGAUUUGGG-UAUUUUUUUUAUAUGCAAA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Wrnip1 RAID00016276 rno-miR-22-3p miRNA MIMAT0000791 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID00060389 rno-miR-301a-3p miRNA MIMAT0000552 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID00188147 rno-miR-144-3p miRNA MIMAT0000850 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID00258928 rno-miR-130b-3p miRNA MIMAT0000837 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID00290139 rno-miR-92a-3p miRNA MIMAT0000816 Wrnip1 mRNA 282835 Prediction 0.2381 Wrnip1 RAID00322754 rno-miR-25-3p miRNA MIMAT0000795 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID00731811 rno-miR-325-3p miRNA MIMAT0004639 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID00868073 rno-miR-135b-5p miRNA MIMAT0000611 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID01137389 rno-miR-19a-3p miRNA MIMAT0000789 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID01220343 rno-miR-203a-3p miRNA MIMAT0000876 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID01224383 rno-miR-19b-3p miRNA MIMAT0000788 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID01332668 rno-miR-130a-3p miRNA MIMAT0000836 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID01362256 rno-miR-200b-3p miRNA MIMAT0000875 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID01379979 rno-miR-24-3p miRNA MIMAT0000794 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID01521427 rno-miR-381-3p miRNA MIMAT0003199 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID01584052 rno-miR-363-3p miRNA MIMAT0003210 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID01666332 rno-miR-32-5p miRNA MIMAT0000811 Wrnip1 mRNA 282835 Prediction 0.2381 Wrnip1 RAID01694009 rno-miR-425-5p miRNA MIMAT0005314 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID02025969 rno-miR-200c-3p miRNA MIMAT0000873 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID02113200 rno-miR-3596b miRNA MIMAT0017871 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID02229222 rno-miR-183-5p miRNA MIMAT0000860 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID02450166 rno-miR-320-3p miRNA MIMAT0000903 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID02471716 rno-miR-466b-2-3p miRNA MIMAT0017286 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID02524928 rno-miR-301b-3p miRNA MIMAT0005304 Wrnip1 mRNA 282835 Prediction 0.2202 Wrnip1 RAID02660509 rno-miR-92b-3p miRNA MIMAT0005340 Wrnip1 mRNA 282835 Prediction 0.2381 Wrnip1 RAID02763393 rno-miR-410-3p miRNA MIMAT0005311 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID02940737 rno-miR-448-3p miRNA MIMAT0001534 Wrnip1 mRNA 282835 Prediction 0.2381 Wrnip1 RAID03043552 rno-miR-135a-5p miRNA MIMAT0000841 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID03148929 rno-miR-186-5p miRNA MIMAT0000863 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID03231905 rno-miR-153-3p miRNA MIMAT0000855 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID03366587 rno-miR-466b-4-3p miRNA MIMAT0037262 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID03493811 rno-miR-429 miRNA MIMAT0001538 Wrnip1 mRNA 282835 Prediction 0.1828 Wrnip1 RAID03866451 rno-miR-96-5p miRNA MIMAT0000818 Wrnip1 mRNA 282835 Prediction 0.1828