DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Zranb1; LOC100360606 rno-miR-103 99 121 AGUAUCGGGACAUGUUACGACGA- |||| ||||| :|| ||||| CCAUA-CCCUGCCGGAU-CUGCUC Zranb1; LOC100360606 rno-miR-122a 93 123 -UGUUUG--------UGGUAACAGUGUGAGGU :|:|:| :||: || ::|||| AGCGAGCCAUACCCUGCCGGA-UC-UGCUCCC Zranb1; LOC100360606 rno-miR-127 96 119 -UCGGUUCGAGUCUGCCUAGGCU ||||| | | ||||||:| GAGCCAUACCCUGCCGGAUCUGC Zranb1; LOC100360606 rno-miR-135a 86 105 AGUGUAUCCUUAUUUUUCGGUAU- :||| |||: :||||||| -AGCAU-GGAGC---GAGCCAUAC Zranb1; LOC100360606 rno-miR-135b 86 105 GUGUAUCCUUACUUUUCGGUAU- :||| |||: :||||||| AGCAU-GGAGC---GAGCCAUAC Zranb1; LOC100360606 rno-miR-136 166 187 -AGGUAGUAGUUUUGUUUACCUCA ||:: ||| :|: |:|||||| AUCUG-CAU--GAGGAGAUGGAGA Zranb1; LOC100360606 rno-miR-152 119 147 -GGGUUCA------AGACAGUACGUGACU ||||||| |||||: ||||| UCCCAAGUUAUCUUUCUGUUCCGCACUC- Zranb1; LOC100360606 rno-miR-154 76 102 -GCUUC--CGUUGUGCCUA--UUGGAU |||| |||:||:||| |:|| CCGAAUAUGCAGCAUGGAGCGAGCCA- Zranb1; LOC100360606 rno-miR-17 165 194 UGAUGGACGUGACAUUCG------UGAAAC- |:|||||: :|| |||||| --AAUCUGCAUGAGGAGAUGGAGAACUUUGG Zranb1; LOC100360606 rno-miR-181a 142 166 -UGAGUGG-CUGUCGCAACUUACAA ||||||: || || |||:|| CACUCACUAGAGAGAACUGAGUGA- Zranb1; LOC100360606 rno-miR-181b 143 166 -GGGUGG-CUGUCGUUACUUACAA |:|||: || || |||:|| ACUCACUAGAGAGAACUGAGUGA- Zranb1; LOC100360606 rno-miR-181c 142 166 -UGAGUGG-CUGUCCA-ACUUACAA ||||||: || || |||:|| CACUCACUAGAGAGAACUGAGUGA- Zranb1; LOC100360606 rno-miR-184 102 123 -UGGGAAUAGUCAAGAGGCAGGU ||||| |:| ||| | ||| UACCCUGC-CGGAUCUGC-UCCC Zranb1; LOC100360606 rno-miR-185 105 123 CUUGACGGAA-AGA-GAGGU ||||| ||| |||| --CCUGCCGGAUCUGCUCCC Zranb1; LOC100360606 rno-miR-207 173 189 UUCCCUCCUCUCGGUCCUCUUCG ||||||| |||||| ---UGAGGAGAU---GGAGAAC- Zranb1; LOC100360606 rno-miR-20b 165 194 -UGGACGUGAUACUCG------UGAAAC- |:|||||: ||| |||||| AAUCUGCAUGAGGAGAUGGAGAACUUUGG Zranb1; LOC100360606 rno-miR-217 51 89 UAGG--UCAGUCAA------------GGAC--UACGUCAU || |||:||| || |||||| -CCCAAAGUUAGUGUGGUAUCUUAAGCCGAAUAUGCAGC- Zranb1; LOC100360606 rno-miR-24 133 167 -GACAAGGAC-GA---------CUUGACUCGGU- ||||||| || ||||||||: | UCUGUUCCGCACUCACUAGAGAGAACUGAGUGAA Zranb1; LOC100360606 rno-miR-291-3p 169 193 CCGUGUGUUUC-ACCUUCGUGAAA- |||: ::|| |||| ||||| UGCAUGAGGAGAUGGAGA-ACUUUG Zranb1; LOC100360606 rno-miR-292-5p 42 66 GUUUUCUCGGGGG-UCAAACUCA- :|:| :||||| |||| | || UGAGAUGGCCCCAAAGUUAGUGUG Zranb1; LOC100360606 rno-miR-296 35 54 UGUCCUAACUCCCCCCCGGGA |||| |||| ||||| UCAGGUCUGAGAU--GGCCCC Zranb1; LOC100360606 rno-miR-298 90 112 CCUUCUUG-UCGGGA-GGAGACGG- :||:| |||| || ||||| --UGGAGCGAGCCAUACC-CUGCCG Zranb1; LOC100360606 rno-miR-29a 73 97 -UUGGCUAAA--GUC-UACCACGAU |:|||| ||| |||| || AAGCCGAAUAUGCAGCAUGGAGCG- Zranb1; LOC100360606 rno-miR-29c* 4 43 CUUGUGG--UCCUCUU--------------UAG-CCAGU ||||:| ||||||| ||| |||| AAACAUCUAAGGAGAAAAAAAGACCAAGGCAUCAGGUCU Zranb1; LOC100360606 rno-miR-31 55 79 GUCGAU-ACGGUCGUAGAA--CGGA ||:|| || ::|:||||| ||| AAGUUAGUG-UGGUAUCUUAAGCCG Zranb1; LOC100360606 rno-miR-325 140 179 -UGUGAA----------UGACUCG--UGGAUGA--UCC- :|||| ||||||: |:||:| ||| CGCACUCACUAGAGAGAACUGAGUGAAUCUGCAUGAGGA Zranb1; LOC100360606 rno-miR-328 30 53 UGCCU---UCCCGUCUCUCCCGGUC || ||| | |||| |||| -AGGCAUCAGGUCUGAGAUGGCCC- Zranb1; LOC100360606 rno-miR-337 28 51 UUUCCGUAGUAUAUCCUCGACUU ||||||||| :| ||| ||: CAAGGCAUCAGGUCUGAGAUGGC Zranb1; LOC100360606 rno-miR-340 30 51 -CCGAUAUUUCAUUGACUCUGCCU ||| || |:|| ||||||:|| AGGC-AUCAGGU--CUGAGAUGGC Zranb1; LOC100360606 rno-miR-343 166 188 -AGACCCGUGUGCCUC--CCUCU- ||| |||:: |||| ||||| AUCU--GCAUGAGGAGAUGGAGAA Zranb1; LOC100360606 rno-miR-34a 78 113 -UUGUUGGUCGA--UUC--------UGUGACGGU- ||:| |||| :|| || |||||: GAAUAUGCAGCAUGGAGCGAGCCAUACCCUGCCGG Zranb1; LOC100360606 rno-miR-34c 86 112 -CGUUAGUCGAUUG--AUGUGACGGA ||| ||| |:| ||| ||||| AGCAUGGAGCGAGCCAUACCCUGCCG Zranb1; LOC100360606 rno-miR-370 33 69 UUGGUCCAAGG------UGGGGU--CGU-----CCG- |:|||| ||: :||||| |: ||: CAUCAGG-UCUGAGAUGGCCCCAAAGUUAGUGUGGUA Zranb1; LOC100360606 rno-miR-376a* 143 173 -GAGU-AUCUUCCU-------CUUAGAUGG |||| ||||: || ||||||:| ACUCACUAGAGAGAACUGAGUGAAUCUGCA Zranb1; LOC100360606 rno-miR-409-3p 64 92 CCCCA-AG----UGGCU----CGUUGUAA ||| || :|||| |||:||| -UGGUAUCUUAAGCCGAAUAUGCAGCAUG Zranb1; LOC100360606 rno-miR-431 86 116 ACGUAC--UGC-CGG------ACGUUCUGU ||||| :|| ||| ||| :||: AGCAUGGAGCGAGCCAUACCCUGCCGGAUC Zranb1; LOC100360606 rno-miR-448 60 89 -UAC-CCUGUAGGAUG-----UAUACGUU- :|| || :|||:|| |||||||: AGUGUGG-UAUCUUAAGCCGAAUAUGCAGC Zranb1; LOC100360606 rno-miR-449 84 113 UGGUCGA---UUGUU----AUGUGACGGU- |||| |:|:| ||| |||||: -GCAGCAUGGAGCGAGCCAUACCCUGCCGG Zranb1; LOC100360606 rno-miR-542-3p 123 145 AAGUCAAUAGUUAGACA--GUGU- ||||||| ||||| |:|| --AAGUUAUCUUUCUGUUCCGCAC Zranb1; LOC100360606 rno-miR-93 165 194 GAUGGACGUGCUUGUCG------UGAAAC- |:|||||:||: || |||||| -AAUCUGCAUGAGGAGAUGGAGAACUUUGG Zranb1; LOC100360606 rno-miR-122a 121 148 uGUUU-GUGGUA--ACA--GUGUGAGgu |||: :|:| | ||| |:||||| cCAAGTTATCTTTCTGTTCCGCACTCac Zranb1; LOC100360606 rno-miR-127 97 118 UCGGUUCGAGUCUGCCUAGGCu ||||| | | | ||||||:| AGCCATACCCTGCCGGATCTGc Zranb1; LOC100360606 rno-miR-135a 84 103 aGU-GUAUCCUUAUUUUUCGGUAU || ||| || |: :||||||| gCAGCAT-GG---AGCGAGCCATA Zranb1; LOC100360606 rno-miR-135b 77 103 GUGUAU-C--CUUACUU--UUCGGUAU |: ||| | | |||:| :||||||| CGAATATGCAGCATGGAGCGAGCCATA Zranb1; LOC100360606 rno-miR-136 163 186 aggUAGUAGU-UUUGUUUACCUCa ||| || :|: |:|||||| tgaATCTGCATGAGGAGATGGAGa Zranb1; LOC100360606 rno-miR-152 120 147 GGGUUC------AAGACAGUACGUGAcu |||||| ||||||: ||||| CCCAAGTTATCTTTCTGTTCCGCACTca Zranb1; LOC100360606 rno-miR-154 77 108 GCU--UCCGUUGUGCC--------UAUUGGAu ||| | |||:||:|| ||| ||| CGAATATGCAGCATGGAGCGAGCCATACCCTg Zranb1; LOC100360606 rno-miR-17 163 192 ugaUGGACGUG-------ACAUUCGUGAAAC |:|||||: || :|| |||||| tgaATCTGCATGAGGAGATG-GAGAACTTTG Zranb1; LOC100360606 rno-miR-181a 143 166 UGAGUGG-CUGUCGCAACUUACaa ||||||: || || |||:|| ACTCACTAGAGAGAACTGAGTGaa Zranb1; LOC100360606 rno-miR-181b 144 166 GGGUGG-CUGUCGUUACUUACaa |:|||: || || | |||:|| CTCACTAGAGAGAACTGAGTGaa Zranb1; LOC100360606 rno-miR-181c 143 166 UGAGUGG-CUGUC-CAACUUACaa ||||||: || || |||:|| ACTCACTAGAGAGAACTGAGTGaa Zranb1; LOC100360606 rno-miR-184 119 140 uGGG---AAUAGUCAAGAGGCAGGu ||| ||||| |:||:||:| tCCCAAGTTATC---TTTCTGTTCc Zranb1; LOC100360606 rno-miR-185 103 122 cuuGACGG-AAAGA-GAGGu ||||| ||| |||| accCTGCCGGATCTGCTCCc Zranb1; LOC100360606 rno-miR-207 170 189 uuccCUCCUCUCGGUCCUCUUcg ||||||| |||||| gcatGAGGAGA---TGGAGAAct Zranb1; LOC100360606 rno-miR-20b 166 192 UGGACGUG-----AUA-CUCGUGAAAC |:|||||: || ||| |||||| ATCTGCATGAGGAGATGGAGAACTTTG Zranb1; LOC100360606 rno-miR-217 50 89 uaGG--UCAGUCA------AGGA-----C---UACGUCau || |||:||| ||:| | |||||| ccCCAAAGTTAGTGTGGTATCTTAAGCCGAATATGCAGca Zranb1; LOC100360606 rno-miR-24 134 165 GACAAGGAC------GA-----CUUGACUCggu ||||||| | || |||||||| CTGTTCC-GCACTCACTAGAGAGAACTGAGtga Zranb1; LOC100360606 rno-miR-292-5p 20 46 gUUUUCU-----CGGGGGUCAAACUCa |||||| || :| :|| |||| aAAAAGACCAAGGCATCAGGTCTGAGa Zranb1; LOC100360606 rno-miR-298 88 110 ccuuCUUG-UCGGGA-GGAGACGG ||:| |||| | || ||||| catgGAGCGAGCCATACC-CTGCC Zranb1; LOC100360606 rno-miR-29a 74 97 UUGGC-UA-AAGUC-UACCACGau |:||| || | ||| |||| || AGCCGAATATGCAGCATGGAGCga Zranb1; LOC100360606 rno-miR-29c* 22 42 cUUGUGGUCCUCUUUAG-CCAGu || |||| ||: ||| |||| aAAGACCA--AGGCATCAGGTCt Zranb1; LOC100360606 rno-miR-325 127 152 uguGAAUGAC---UCGUGGA-UGAUCc ||| ||| ||| || ||||| tatCTTTCTGTTCCGCA-CTCACTAGa Zranb1; LOC100360606 rno-miR-328 32 53 ugccuUCCCGUCUCUCCCGGuc ||| | |||| |||| gcatcAGGTCTGAGATGGCCcc Zranb1; LOC100360606 rno-miR-340 31 50 CCGAUAUUUCAUUGACUCUGCCu ||| || |:|| ||||||:|| GGC-ATCAGGT--CTGAGATGGc Zranb1; LOC100360606 rno-miR-343 167 186 AGACCCGUGUGCCUC--CCUCU ||| |||:: |||| ||||| TCT--GCATGAGGAGATGGAGA Zranb1; LOC100360606 rno-miR-34a 90 111 uugUUGGUCGAUUCUGUGACGGu |:| ||| | || ||||| tggAGCGAGC-CATACCCTGCCg Zranb1; LOC100360606 rno-miR-34c 87 111 CGUUAGUCGAUUG--AUGUGACGGa ||| ||| |:| ||| ||||| GCATGGAGCGAGCCATACCCTGCCg Zranb1; LOC100360606 rno-miR-370 60 93 uugguCCA-AGG--UGGG-------GUCGU-CCg ||| ||: | || ||||| || agtgtGGTATCTTAAGCCGAATATGCAGCATGGa Zranb1; LOC100360606 rno-miR-376a* 144 172 GAGU-AUCU-UC----CU--CUUAGAUGg |||| |||| || || ||||||:| CTCACTAGAGAGAACTGAGTGAATCTGCa Zranb1; LOC100360606 rno-miR-409-3p 63 91 CCCCA-AG----UGGCU----CGUUGUAa | ||| || :|||| |||:||| GTGGTATCTTAAGCCGAATATGCAGCATg Zranb1; LOC100360606 rno-miR-431 83 101 ACGUACUGCCGGACGUUCUGU |||| |:|| ||:|| || TGCAGCATGG--AGCGAGCCA Zranb1; LOC100360606 rno-miR-448 61 87 uACCCUGUAGGAU---G--UAUACGUu || |::|||:|| | ||||||| gTGTGGTATCTTAAGCCGAATATGCAg Zranb1; LOC100360606 rno-miR-449 90 111 uggUCGAUUGUUAUGUGACGGu ||| |:| |||| ||||| tggAGCGAGCCATACCCTGCCg Zranb1; LOC100360606 rno-miR-542-3p 121 141 aagUCAAUAGUUAGACAGUGu ||||||| |||||: | ccaAGTTATCTTTCTGTTCCg Zranb1; LOC100360606 rno-miR-93 164 192 gaUGGACGUGCU----UG--UCGUGAAAC |:|||||:|| |: || |||||| gaATCTGCATGAGGAGATGGAGAACTTTG Zranb1; LOC100360606 rno-miR-448 80 87 ----------------UAC-CCUGUAGGAUG-----UAUACGUU :|| || :|||:|| |||||||: GAUGGCCCCAAAGUUAGUGUGG-UAUCUUAAGCCGAAUAUGCAGC

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Zranb1 RAID00657465 rno-miR-544-3p miRNA MIMAT0012831 Zranb1 mRNA 100360606 Prediction 0.1828 Zranb1 RAID00876460 rno-miR-194-3p miRNA MIMAT0017148 Zranb1 mRNA 100360606 Prediction 0.1828 Zranb1 RAID01304804 rno-miR-126a-5p miRNA MIMAT0000831 Zranb1 mRNA 100360606 Prediction 0.1828 Zranb1 RAID01402901 rno-miR-325-3p miRNA MIMAT0004639 Zranb1 mRNA 100360606 Prediction 0.1828 Zranb1 RAID02229219 rno-miR-204-3p miRNA MIMAT0004739 Zranb1 mRNA 100360606 Prediction 0.1828 Zranb1 RAID02422801 rno-miR-298-3p miRNA MIMAT0017166 Zranb1 mRNA 100360606 Prediction 0.1828