DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Klhl35 rno-miR-140* 31 55 -ACAG-GCACCAAGAUGGGAC-ACCAU || | ||| ||||| ||| AUGGCACUUGGCCC--CCCUGCUGGA- Klhl35 rno-miR-17 20 41 UGAUGGA----CGUGACAUUCGUGAAAC :|| |||: :|||||| --AGCCAGGAGGCAU----GGCACUUG- Klhl35 rno-miR-187 9 36 GCC-GACGUU----GUGUUCUGUGCU- || | || || :||:||:|: GGGACAGCCUCAGCCAGGAGGCAUGGC Klhl35 rno-miR-189 5 34 -UGACUAU-----AGUCGAGUCAUCCGUG- ||||: ||||| ||| |||||: GACUGGGACAGCCUCAGC-CAGGAGGCAUG Klhl35 rno-miR-193 6 27 -GACCCUGAAACAUCCGGUCAA ||||||| ||||| ACUGGGACAGCCUCAGCCAGG- Klhl35 rno-miR-207 8 37 UUCCCUCCUC---UCGGUCCUCU---UCG- |||| |||||||||: :|| -UGGGACAGCCUCAGCCAGGAGGCAUGGCA Klhl35 rno-miR-214 28 54 GACGGACA---GACAC---GGACGACA || || :|| ||||||| -GGCAUGGCACUUGGCCCCCCUGCUGG Klhl35 rno-miR-291-3p 20 41 CCGUGUGUUUCACCUUCGUGAAA || || :|:| :|||||| AGC-CAGGAGGCAU-GGCACUUG Klhl35 rno-miR-292-3p 14 41 -UGUGAGUUUUGGA---CCG--CCGUGAA- :| |||| :|| ||| ||||||| AGC-CUCA--GCCAGGAGGCAUGGCACUUG Klhl35 rno-miR-298 24 53 -CCUUC---UUG----UCGGGAGGAGACGG- |||:| ::| :|||| || ||||: AGGAGGCAUGGCACUUGGCCC-CC-CUGCUG Klhl35 rno-miR-324-3p 12 36 GGUCGUCG-UGGACC-CCGUCACC- |||| :|| || |||| ||| ACAGCCUCAGCCAGGAGGCA-UGGC Klhl35 rno-miR-325 33 55 -UGUGAAUGACUCGU--GGAUGAUCC :||||| :|| |||:||:| GGCACUU----GGCCCCCCUGCUGGA Klhl35 rno-miR-326 5 55 -UGACC-------------UCCUUC----------CCGGGUCU CC ||||| ||||:| ||||| || GACUGGGACAGCCUCAGCCAGGAGGCAUGGCACUUGGCCCCCCUGCUGGA Klhl35 rno-miR-331 6 32 AAGAUCCUAUCCG----GGUCC-CCG- ||:||| || ||||| ||| -ACUGGGACAGCCUCAGCCAGGAGGCA Klhl35 rno-miR-338 17 56 -AGUU-GUUUUA------GUG-ACU------ACGACCU- |||: ||::| ||| ||: ||||||| CUCAGCCAGGAGGCAUGGCACUUGGCCCCCCUGCUGGAA Klhl35 rno-miR-345 5 38 CGUGACC----------UGAUCC-CCAG-UCGU- ||||| :| ||| || :||| -GACUGGGACAGCCUCAGCCAGGAGGCAUGGCAC Klhl35 rno-miR-346 24 44 -UCUCCGU-CCGUGAGUCCGUCUGU :|||||| ||||||: ||| AGGAGGCAUGGCACUU-GGCC---- Klhl35 rno-miR-347 7 33 -ACCC-GCUGG-GUC--UCC-CUGU- |||| | :|| ||| ||| |:|| CUGGGACAGCCUCAGCCAGGAGGCAU Klhl35 rno-miR-34a 10 45 -UUGUUGG--UCGA--UUCUGUGA-------CGGU :|||:|| ||| :||:||: ||| GGACAGCCUCAGCCAGGAGGCAUGGCACUUGGCCC Klhl35 rno-miR-34c 18 45 CGUUAGUCGAUUGA--UGUGA--CGGA ||: ||| ::| :|||| ||| UCAGCCAGGAGGCAUGGCACUUGGCCC Klhl35 rno-miR-351 1 29 GUCCGAGUUU--CCCGA--GGAGUC---CCU- ||||:| ||| |||||| ||| ----CUCAGACUGGGACAGCCUCAGCCAGGAG Klhl35 rno-miR-370 4 32 -UUGGUCCAAGGUGGGGUCG----UCCG- :||::|| :||:|||| |||| AGACUGGGACA-GCCUCAGCCAGGAGGCA Klhl35 rno-miR-378 5 30 -UGUGUCC--UGGACCUCAGUCCUC- || :| :||| || |||||| GACUGGGACAGCCUC-AGCCAGGAGG Klhl35 rno-miR-449 20 45 -UGGUCGAUUGUUAUGUGA--CGGU :|||| ::|| :|||| ||| AGCCAGGAGGCAUGGCACUUGGCCC Klhl35 rno-miR-485 1 21 CUUAAGUA-GUGCCGGUCGGAGA ||| | || ||||||| ---CUCAGACUGGGACAGCCUCA Klhl35 rno-miR-503 32 54 GUCAUG-ACAAGGGCGACGAU- :| || || ||| |||||: UGGCACUUGGCCCCCCUGCUGG Klhl35 rno-miR-93 45 78 GAUGGACGUGCU------------UGUCGUGAAAC ||||| || ||||| |||| --CCCUGCUGGAACCUCCAUGUGAACAGCCCUUUA Klhl35 rno-miR-140* 32 55 ACAG-GCACCAAGAUGGGAC-ACCau || | | ||| | ||||| ||| TGGCACTTGG--CCCCCCTGCTGGaa Klhl35 rno-miR-17 12 41 UGAUGGA--CGUGACAU-----UCGUGAAac || :||| || | | | :|||||| ACAGCCTCAGC-CAGGAGGCATGGCACTTgg Klhl35 rno-miR-187 13 34 GCCGACGUU-GUGUUCUGUGCu | || ||: || :||:||:| CAGCCTCAGCCAGGAGGCATGg Klhl35 rno-miR-189 6 32 UGACUAU-----AGUCGAGUCAUCCGUg ||||: | ||||| ||| ||||| ACTGGGACAGCCTCAGC-CAGGAGGCAt Klhl35 rno-miR-193 7 27 GACCCUGAAACAUCCGGUCaa ||||||| | ||||| CTGGGACAGCCTCAGCCAGga Klhl35 rno-miR-207 7 32 uuCCCUCCUC----UCGGUCCUCuucg |||| || ||||||||| ctGGGA-CAGCCTCAGCCAGGAGgcat Klhl35 rno-miR-214 27 53 gaCGGACAG---ACAC----GGACGACa || || | || | ||||||| agGCATGGCACTTG-GCCCCCCTGCTGg Klhl35 rno-miR-291-3p 15 40 CCGUGU-GUUUCACC-U-UCGUGAAa | | || | |:| || | :|||||| GCCTCAGCCAGGAGGCATGGCACTTg Klhl35 rno-miR-292-3p 12 39 UGU--GAGUUUUGGACC-----GCCGUGAA ||| ||| |:|| || :||||||| ACAGCCTC--AGCCAGGAGGCATGGCACTT Klhl35 rno-miR-298 25 51 CCUUCUUGUCGGGA-----GGAGACGg |||:| |::|| || || |||| GGAGGCATGGCACTTGGCCCCCCTGCt Klhl35 rno-miR-325 34 54 uGUGAAUGACUCGUGGAUGAUCc |||||: | | |||:||:| gCACTTG--GCCCCCCTGCTGGa Klhl35 rno-miR-326 6 29 UGACCUCCUUC----CCGGGUCUCC ||||| | || ||| :|||| ACTGG-GACAGCCTCAGCCAGGAGG Klhl35 rno-miR-331 5 30 aaGAUCCUAUCCG----GGUCC-CCG ||:||| || | ||||| ||| gaCTGGGACAGCCTCAGCCAGGAGGC Klhl35 rno-miR-338 32 54 aguuguuuuagugacuACGACCU ||||||| tggcacttggccccccTGCTGGA Klhl35 rno-miR-345 1 17 cgugacCUGAUCCCCAGUCGu |||| ||| |||| --ctcaGACT--GGGACAGCc Klhl35 rno-miR-346 18 36 ucUCCGUCCGUGAGUCCGU-CUGU || |||| ||||| |:|| tcAGCCAGG-----AGGCATGGCA Klhl35 rno-miR-347 1 14 acccgcuGGGUCU--CCCUGU |:|||| |||||| -------CTCAGACTGGGACA Klhl35 rno-miR-34a 17 44 uuGUUGGU----CGAUUCUGUGA--CGGu ||:||| || | |:|||| ||| ctCAGCCAGGAGGC-ATGGCACTTGGCCc Klhl35 rno-miR-34c 15 44 CGUUAGUCGAU------UGAUGUGA--CGGa || ||||| | |: :|||| ||| GC-CTCAGCCAGGAGGCATGGCACTTGGCCc Klhl35 rno-miR-370 5 27 uUGGUCCAAGGUGGGGUC-GUCCg ||::|| | :||:||| |||| gACTGGG-ACAGCCTCAGCCAGGa Klhl35 rno-miR-378 10 28 ugUGUCCUGGACCUCAGUCCUC |||| ||| || |||||| ggACAG--CCT-CAGCCAGGAG Klhl35 rno-miR-449 21 44 uGGUCGAUUGUUAUGUGA--CGGu |||| ::|| :|||| ||| gCCAGGAGGCATGGCACTTGGCCc Klhl35 rno-miR-93 53 77 gaUGGACGU--GCUUGUCGUGAAAc |||| || :||||||| |||| gaACCTCCATGTGAACAGCCCTTTa Klhl35 rno-miR-214 46 53 GAC-----------------------GGACAGACACGGACGACA |:|| ||||||| GACAGCCUCAGCCAGGAGGCAUGGCACUUGGCCCC-CCUGCUGG

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Klhl35 RAID02794608 rno-miR-3564 miRNA MIMAT0017837 Klhl35 mRNA 308850 Prediction 0.1828