DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G122292 Mylip Rattus norvegicus 306825

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Mylip rno-let-7a 144 161 UUGAUAUGUUGGAUGAUGGAGU ||:|:||| || ||||| ---AAUGCGACC-AC-ACCUCU Mylip rno-let-7c 144 161 UUGGUAUGUUGGAUGAUGGAGU ||:|:||| || ||||| ---AAUGCGACC-AC-ACCUCU Mylip rno-let-7d 144 162 UGAUACGUUGGAUGAUGGAGA- ||||:||| || |||||| --AAUGCGACC-AC-ACCUCUU Mylip rno-miR-101a 27 54 GAAGUCAAUAG----------UGUCAUGACAU- |:|| :|||||:|||| ------AUGUCCCCACAAGCUGCAGUAUUGUAA Mylip rno-miR-101b 37 54 GAAGUCGAUAGUGUCAUGACAU- |||| :|||||:|||| ---AAGCU---GCAGUAUUGUAA Mylip rno-miR-103 20 45 AGUAUCGGGACA----UGUUACGACGA ||| ||| ||| |||| ||||| GCAU-GCCAUGUCCCCACAA-GCUGCA Mylip rno-miR-107 3 27 ACUAUCGGGACAUGUUA----CG-ACGA |:|||||:| || ||| ----CGUCCUGUGCUUACUGGGCAUGCC Mylip rno-miR-145 1 23 UUCCCUAAGGACCCUUUUGACCUG- | ||||| | |||||:| ---UGCGUCCUGUGCUUACUGGGCA Mylip rno-miR-150 204 239 GUGACCAUGUU-------------CCC--AACCCUCU |||| ||| ||| |||||: -UCUGGAACAUGGACACAUUCCUUGGGCUUUGGGGU- Mylip rno-miR-152 389 425 -GGGUUCAAGA---------CAGUA---CGUGACU- ||: :||||| ||||| ||:|||| UCCUUGGUUCUUUUUGUAUGGUCAUGGAGCGCUGAA Mylip rno-miR-183 8 31 GUCACUUAAGAUGGUC---ACGGUAU- ||| :|||::| ||||||: -UGUGC---UUACUGGGCAUGCCAUGU Mylip rno-miR-187 186 221 -GCCG---------------ACGUUGUGUUCUGUGCU :||| || ||||: :||||| AUGGCAACCAGGAAGAGAUCUGGAACAU-GGACACA- Mylip rno-miR-189 270 296 -UGACU---AUAGUCGAGUCAUCCGUG |:|| |:||||: ||| |||| AAUUGUCUCUGUCAGUCAAGU-GGCAA Mylip rno-miR-199a 193 231 CUUGUCCA--UC-AGA-CUUGUG------------ACCC- |||| || ||| |||||: |||| --CCAGGAAGAGAUCUGGAACAUGGACACAUUCCUUGGGC Mylip rno-miR-200b 2 24 CAGUAGU-----AAUGGUCCGUCAUAAU |:|| ||||::|||| -GCGUCCUGUGCUUACUGGGCAU----- Mylip rno-miR-200c 20 52 GGUA--GUAAU-GGGC------CGUCAUAAU- ||| ||| ||| ||||||||: GCAUGCCAUGUCCCCACAAGCUGCAGUAUUGU Mylip rno-miR-207 127 177 UUC-CCUCCU-------------CU-------------CGGUCCUCUUCG | |||||| || |: ||||||||| -CGAGGAGGAAAGGAAAGAAUGCGACCACACCUCUUCUGUGAGGAGAAGCA Mylip rno-miR-20b* 17 48 GUCUUCACGAGUG----------UGACGUCA- :|: ||| ||: :||||||| UGGGCAUGC-CAUGUCCCCACAAGCUGCAGUA Mylip rno-miR-214 1 20 GACGGACAGACACGGACGACA ||| | ||||||:| ||| -UGCGUC-CUGUGCUUACUGG Mylip rno-miR-24 1 23 GACA-AGGACGACU-UGACUCGGU || |||||: ||||:|| -UGCGUCCUGUGCUUACUGGGCA- Mylip rno-miR-27a 288 313 -CGCC-UUGAAUCGG--UGACACUU |:|| ||| |:||| || |||: AGUGGCAACAUGGCCCAACCGUGGG Mylip rno-miR-28 284 320 GAG-UUAUC------------UGACACUCGAGGAA- || |:|:| || |||:|| |||| GUCAAGUGGCAACAUGGCCCAACCGUGGGCACCUUU Mylip rno-miR-292-3p 281 317 UGUGAGUUU--UGG---ACCG---------CCGUGAA || ||||: :| |||| ||||| UCAGUCAAGUGGCAACAUGGCCCAACCGUGGGCACC- Mylip rno-miR-298 129 167 -CCUUCUUG----UCG-----------GGAGGAGACGG |||:||| || ||||:||||: AGGAGGAAAGGAAAGAAUGCGACCACACCUCUUCUGUG Mylip rno-miR-324-5p 1 27 -UGU-GGUUACGGGAU-CCCCUACGC :|: || :|||:: ||| |||| UGCGUCCUGUGCUUACUGGGCAUGCC Mylip rno-miR-325 10 28 UGUGAAUGACUCG--UGGAUGAUCC :|||||||:|| :|| -UGCUUACUGGGCAUGCCA------ Mylip rno-miR-330 1 23 AGAGACGUCCGGGACACGAAA----CG- ||| |:||||||||| || ----UGC--GUCCUGUGCUUACUGGGCA Mylip rno-miR-342 125 174 CUGC-CC--------------ACGCUA--------AAGACACA CUCU ||| || ||||| ||||||| |||| AACGAGGAGGAAAGGAAAGAAUGCGACCACACCUCUUCUGUGAGGAGAA Mylip rno-miR-349 165 192 UCUCCAAUUC--UGUCGUC----CCGAC |||| ||| ||||: ||| UGAGGAGAAGCAACAGUUCCCAUGGCA- Mylip rno-miR-363-5p 299 319 UUUAACGUA---GCACUAGGUGGGC || ||||: ||||: ----GGCCCAACCGUGGG-CACCUU Mylip rno-miR-370 14 47 UUGGUCCAA--GGU---GGGGU------CGUCCG ||::|| ||| ||||| |||| UACUGGGCAUGCCAUGUCCCCACAAGCUGCAGU- Mylip rno-miR-429 18 52 UGCCGUAAUGGU-C------------UGUCAUAAU- |||| |:||| | :|||||||: -GGGCA-UGCCAUGUCCCCACAAGCUGCAGUAUUGU Mylip rno-miR-483 108 146 -UGUUCUGC-------------CCUCCCCUCCUCACU- |::||||| ||||| |||| || CAUGAGACGUUUCCAGAAACGAGGAGGAAAGGAAAGAA Mylip rno-miR-489 305 337 CGACGGUAUAUAC--------------ACUACAGUAA ||:|: | ||||||||| ---ACCGUGG--GCACCUUUAAGGAAAUGAUGUCAUA Mylip rno-miR-542-5p 18 36 GCACUGUAC--UACUAGGGGCUC |:|||| ||| ||||| --GGGCAUGCCAUG-UCCCCA-- Mylip rno-miR-98 140 161 -UUGUUAUGUUGAAUGAUGGAGU || |||:|:|| || ||||| AAAGAAUGCGACC-AC-ACCUCU Mylip rno-let-7a 141 160 UUGAUAUGUUGGAUGAUGGAGu || ||:|:||| || ||||| AAGAATGCGACC-AC-ACCTCt Mylip rno-let-7c 141 160 UUGGUAUGUUGGAUGAUGGAGu || ||:|:||| || ||||| AAGAATGCGACC-AC-ACCTCt Mylip rno-let-7d 142 160 ugaUACGUUGGAUGAUGGAGA ||||:||| || |||||| agaATGCGACC-AC-ACCTCT Mylip rno-miR-101a 31 52 gaagucaauaguGUCAUGACAU |||||:|||| ccccacaagctgCAGTATTGTA Mylip rno-miR-101b 34 52 gaagUCGAUAGUGUCAUGACAU |||| :|||||:|||| cacaAGCT---GCAGTATTGTA Mylip rno-miR-107 19 44 acuauCGGGACA--UGU-UACGACGa ||| ||| || | ||||| ggcatGCCATGTCCCCACAAGCTGCa Mylip rno-miR-150 203 232 guGACCAUGUUCC--------CAACCCucu |||| ||| || ||||| atCTGGAACATGGACACATTCCTTGGGctt Mylip rno-miR-152 390 423 GGGUUCAAGA---------CAGU---ACGUGACU ||: :||||| |||| ||:|||| CCTTGGTTCTTTTTGTATGGTCATGGAGCGCTGA Mylip rno-miR-18 298 319 auagacgUGAUCUACGUGGAAu || : : ||||||| tggcccaACCGTGGGCACCTTt Mylip rno-miR-183 7 29 GUCACUUAAGAUGGUCACGGUAu | ||| | ||: |||||| CTGTGCTTACTGGGCATGCCATg Mylip rno-miR-187 202 221 gccGACGUUGUGUUCUGUGcu ||| ||||: :||||| gatCTGGAACAT-GGACACat Mylip rno-miR-189 288 315 UGACUAUAGU--CGAGU---CAUCCGUG | ||: | || || || ||:||||| AGTGGCAACATGGCCCAACCGTGGGCAC Mylip rno-miR-199a 191 216 cUUGUCCAUC---AGA-CUUGUGACCc | |||| || ||| ||||| ||| aACCAGGAAGAGATCTGGAACA-TGGa Mylip rno-miR-200b 19 50 CAGUA--GUA-AUGG----UC--CGUCAUAAu | ||| ||| | || || |||||||| GGCATGCCATGTCCCCACAAGCTGCAGTATTg Mylip rno-miR-200c 20 50 gGUA--GUA-AUGGG----C--CGUCAUAAu ||| ||| | ||| | |||||||| gCATGCCATGTCCCCACAAGCTGCAGTATTg Mylip rno-miR-207 153 175 uucccuccucuCGGUCCUCUUCG |: ||||||||| acacctcttctGTGAGGAGAAGC Mylip rno-miR-20b* 24 46 gucUUCACGAGUG--UGACGUCA | || | ||| :||||||| gccATGTCCCCACAAGCTGCAGT Mylip rno-miR-24 1 23 gacaAGGACGAC--UUGACUCGgu ||||| || ||||:|| tgcgTCCTG-TGCTTACTGGGCat Mylip rno-miR-27a 289 312 CGCC-UUGAAUCGG--UGACACuu |:|| ||| |:||| || ||| GTGGCAACATGGCCCAACCGTGgg Mylip rno-miR-28 297 318 gaguuaucUGACACUCGAGGAA || |||:|| |||| atggcccaACCGTGGGCACCTT Mylip rno-miR-292-3p 295 317 UGUG-AGUUUUGG-ACCGCCGUGaa |||: | |||| || ||||| ACATGGCCCAACCGTG--GGCACct Mylip rno-miR-298 138 163 CC-UUCUU--GUCGG-GAGGAGACGg || ||||| |: || | ||||| | GGAAAGAATGCGACCACACCTCTTCt Mylip rno-miR-324-5p 3 26 uguGGUUACGG--GAUCCCCUACGc || :|||: || ||| |||| cgtCCTGTGCTTACT-GGGCATGCc Mylip rno-miR-325 1 20 uguGAAUGACUCGUGGAUGAUCC | | ||| | |:||||:|| -tgCGTCCTGTG--CTTACTGGG Mylip rno-miR-342 140 169 cUGCCCACGCU-------A-AAGACACACUCu | | ||||| | ||| |||||| aAAGAATGCGACCACACCTCTTC--TGTGAGg Mylip rno-miR-349 165 192 uCUCCAAUUC--UGUC----GUCCCGac |||| ||| |||| || ||| tGAGGAGAAGCAACAGTTCCCATGGCaa Mylip rno-miR-363-5p 287 308 UUUAACGUAGCACUAGGUGGGC ||:| ||| | ||: ||| ||| AAGTGGCAACATGGCCCAACCG Mylip rno-miR-370 23 47 uuGGUCCAAGGUGGG---GUCGUCcg ||| | ||| | | | |||| tgCCATG-TCCCCACAAGCTGCAGta Mylip rno-miR-483 109 136 UGUUCUGC-----CCUCCCCUCCUCacu |::||||| || |||||| ATGAGACGTTTCCAGAAACGAGGAGgaa Mylip rno-miR-489 309 336 cgaCG-GUAUAUAC----ACUACAGUAa || | | || | ||||||||| tggGCACCTTTAAGGAAATGATGTCATa Mylip rno-miR-542-5p 16 37 gcaCUGUAC--UACUAGGGGcuc |:|||| ||| ||||| ctgGGCATGCCATG-TCCCCaca Mylip rno-miR-98 141 160 UUGUUAUGUUGAAUGAUGGAGu || |||:|:|| || ||||| AAGAATGCGAC-CAC-ACCTCt Mylip rno-miR-18 312 319 AUAGACG-----------------------UGAUCUACGUGGAAU ||||: || ||||||| --UCUGUCAGUCAAGUGGCAACAUGGCCCAACCGUGGGCACCUUU Mylip rno-miR-200b 43 50 ---------------------CAGUAGUAA-UGGUCCGUCAUAAU ||| || :|: ||||||||: UGUGCUUACUGGGCAUGCCAUGUCCCCACAAGCU--GCAGUAUUGU Mylip rno-miR-200c 43 50 -----------------GGUAGUAAUGGGC-----CGUCAUAAU |||| :| || ||||||||: UGUGCUUACUGGGCAUGCCAU-GUCCCCACAAGCUGCAGUAUUGU Mylip rno-miR-207 168 175 UUCCCUCCUCU-----------------------CGGUCCUCUUCG ||| :|| |: ||||||||| ---GGAAAGGAAAGAAUGCGACCACACCUCUUCUGUGAGGAGAAGCA Mylip rno-miR-429 43 50 UG---------CCGUAAUGGU-C------------UGUCAUAAU ||||| :||| | :|||||||: UGUGCUUACUGGGCAU-GCCAUGUCCCCACAAGCUGCAGUAUUGU Mylip rno-miR-489 329 336 ------CGAC--GGUAUAUAC------------ACUACAGUAA || ||:|: ||||||||| AACAUGGCCCAACCGUGGGCACCUUUAAGGAAAUGAUGUCAUA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Mylip RAID00764915 rno-miR-365-3p miRNA MIMAT0001549 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID00918814 rno-miR-20a-5p miRNA MIMAT0000602 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID01182251 rno-miR-494-3p miRNA MIMAT0003193 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID01444279 rno-miR-19b-3p miRNA MIMAT0000788 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID01464494 rno-miR-3548 miRNA MIMAT0017806 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID01535735 rno-miR-455-5p miRNA MIMAT0005316 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID01543480 rno-miR-92a-3p miRNA MIMAT0000816 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID01556174 rno-miR-25-3p miRNA MIMAT0000795 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID01575288 rno-miR-340-5p miRNA MIMAT0004650 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID01971809 rno-miR-363-3p miRNA MIMAT0003210 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID02146325 rno-miR-92b-3p miRNA MIMAT0005340 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID02607808 rno-miR-3560 miRNA MIMAT0017829 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID02712796 rno-miR-344b-1-3p miRNA MIMAT0017894 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID02868582 rno-miR-106b-5p miRNA MIMAT0000825 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID03012926 rno-miR-222-5p miRNA MIMAT0017164 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID03266312 rno-miR-19a-3p miRNA MIMAT0000789 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID03543702 rno-miR-124-3p miRNA MIMAT0000828 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID03580942 rno-miR-410-3p miRNA MIMAT0005311 Mylip mRNA 306825 Prediction 0.1828 Mylip RAID03671967 rno-miR-32-5p miRNA MIMAT0000811 Mylip mRNA 306825 Prediction 0.1828