PPI - IID Symbol 1 Symbol 2 PMID DBs Evidence Type Adipose Tissue Adrenal Gland Amygdala Bone Bone Marrow Brain Dorsal Root Ganglia Eye Heart Hindgut Hypothalamus Kidney Liver Lung Lymph Nodes Mammary Gland Midgut Neurons Ovary Pancreas Pituitary Gland Placenta Prostate Salivary Gland Skeletal Muscle Small Intestine Spleen Stomach Testes Uterus Tuba1a Map1lc3b 7908909 biogrid exp Snca Map1lc3b 16854843 biogrid exp, ortho Tubb5 Map1lc3b ortho Protein Tia1, RCG56007, isoform CRA_c, TIA1 cytotoxic granule-associated RNA binding protein Map1lc3b ortho Map1lc3b Pdia6 ortho Gfap Map1lc3b ortho Gabarap Map1lc3b ortho Map1s Map1lc3b ortho Stk4_predicted Map1lc3b ortho Hspa4 Map1lc3b ortho ATG4 autophagy related 4 homolog B (S. cerevisiae), Protein Atg4b Map1lc3b ortho Map1lc3b Lepre1 ortho Rad1_predicted Map1lc3b ortho Stk3 Map1lc3b ortho Fam91a1 protein, Protein Fam91a1 Map1lc3b ortho Stbd1 Map1lc3b ortho DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, Protein Ddx41, RCG24134 Map1lc3b ortho Hnrpul1_predicted Map1lc3b ortho Adrb2 Map1lc3b ortho Protein Atg10, RCG44366, isoform CRA_a Map1lc3b ortho Map1lc3b Ggh ortho Uba5 Map1lc3b ortho Ahcy Map1lc3b ortho Hspa5 Map1lc3b ortho Keratin 71, Keratin, type II cytoskeletal 2 epidermal, RCG50682, isoform CRA_a Map1lc3b ortho Map1lc3b Optn ortho Dnaja2 Map1lc3b ortho Dctn1 Map1lc3b ortho Map1lc3b Coronin ortho Phgdh Map1lc3b ortho Hnrnpk Map1lc3b ortho Protein Rptn Map1lc3b ortho Cav1 Map1lc3b ortho Map1lc3b Xrcc5 ortho Mrfap1 Map1lc3b ortho Rbmx Map1lc3b ortho Map1lc3b Atg3 ortho Gapdh Map1lc3b ortho Atp5b Map1lc3b ortho Protein Tma16 Map1lc3b ortho Map1lc3b Arfgap1 ortho Map1lc3b Rtcb ortho Rps8 Map1lc3b ortho Protein Dsp Map1lc3b ortho Protein Taf7, RCG49239, TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa Map1lc3b ortho LOC687711 Map1lc3b ortho Map1lc3b BCL2/adenovirus E1B 19 kDa-interacting protein 3, Protein Bnip3, RCG47375, isoform CRA_b, RDCR-0202-2 protein ortho Ccbl2 Map1lc3b ortho Protein Spag9 Map1lc3b ortho Ulk1_mapped Map1lc3b ortho Protein Cct7, RCG55994, isoform CRA_c Map1lc3b ortho Map1lc3b Nfkb1 ortho Protein Srsf1, RCG34610, isoform CRA_c Map1lc3b ortho Protein Ulk2 Map1lc3b ortho Map1lc3b Mapk15 ortho Rap1gap Map1lc3b ortho Protein Shfm1, RCG28037 Map1lc3b ortho Slc16a1 Map1lc3b ortho Prdx2 Map1lc3b ortho Rps20 Map1lc3b ortho Map1lc3b Enth ortho 5-azacytidine induced gene 1 (Predicted), isoform CRA_a, Protein Cep131 Map1lc3b ortho Map1lc3b Park2 ortho Map1lc3b Hadha ortho Rb1cc1_predicted Map1lc3b ortho Protein Tbc1d2b, TBC1 domain family, member 2B Map1lc3b ortho Luc7l2_predicted Map1lc3b ortho Map1lc3b Hnrnpd ortho Map1lc3b Gorasp2 ortho Hspa4l Map1lc3b ortho LOC681996 protein, Protein Ahsa1, RCG20659, isoform CRA_b Map1lc3b ortho Tufm Map1lc3b ortho Protein Tecpr2 Map1lc3b ortho Pdxk Map1lc3b ortho Carm1 Map1lc3b ortho Hspa1l Map1lc3b ortho Map1lc3b Eef1d ortho Protein Atg16l1 Map1lc3b ortho Flnb_predicted Map1lc3b ortho Trap1 Map1lc3b ortho Map1lc3b Ilf3 ortho LOC686590 Map1lc3b ortho Txn Map1lc3b ortho Hnrnpa2b1 Map1lc3b ortho Keap1 Map1lc3b ortho Protein Atg16l2 Map1lc3b ortho Myocardial ischemic preconditioning associated protein 6, Protein Klhl5 Map1lc3b ortho Protein Ppp2r1a, Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform, isoform CRA_a, Protein phosphatase 2 (Formerly 2A), regulatory subunit A, alpha isoform Map1lc3b ortho Phb Map1lc3b ortho Map1lc3b DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, Ddx5, Protein Ddx5 ortho Alb Map1lc3b ortho Protein Ipo5 Map1lc3b ortho Acta2 Map1lc3b ortho Map1lc3b Kb9 ortho Npm1 Map1lc3b ortho Oatl1_predicted Map1lc3b ortho Protein Tnrc6b Map1lc3b ortho Xpnpep3 Map1lc3b ortho Rps3 Map1lc3b ortho Lgals3bp Map1lc3b ortho Map1lc3b Adnp ortho Map1lc3b Cct3 ortho Pericentriolar material 1, isoform CRA_b, Protein Pcm1 Map1lc3b ortho Rplp1 Map1lc3b ortho Map1lc3b Jup ortho Nup88 Map1lc3b ortho Pfn1 Map1lc3b ortho Tubb2a Map1lc3b ortho Map1lc3b Atg101 ortho Actb Map1lc3b ortho Map1lc3b Protein Tmod3, RCG25684, isoform CRA_a, Tropomodulin 3 ortho Dnajc10 Map1lc3b ortho Protein Tbc1d5 Map1lc3b ortho Map1lc3b Klhl12 ortho Kxd1 Map1lc3b ortho Cul3 Map1lc3b ortho dnmt3b Map1lc3b ortho Rpl11 Map1lc3b ortho Sptan1 Map1lc3b ortho LOC100909609 Map1lc3b ortho Trim28 Map1lc3b ortho Protein Cbl Map1lc3b ortho Pcna Map1lc3b ortho Atg4a Map1lc3b ortho Pdcd6_predicted Map1lc3b ortho Map1lc3b Tubb4b ortho Protein Tnip1, RCG35421, isoform CRA_b Map1lc3b ortho Tuba4a Map1lc3b ortho Map1a Map1lc3b ortho Dlat Map1lc3b ortho Rpl21 Map1lc3b ortho Htt Map1lc3b ortho Fam65a Map1lc3b ortho Hsp90ab1 Map1lc3b ortho Paics Map1lc3b ortho Elavl4 Map1lc3b ortho Rassf3_predicted Map1lc3b ortho Map1lc3b Krt75 ortho Matr3 Map1lc3b ortho Hsd17b10 Map1lc3b ortho Hspa8 Map1lc3b ortho Map1lc3b Ybx3 ortho Protein Fblim1 Map1lc3b ortho Herc2_predicted Map1lc3b ortho Dync1h1 Map1lc3b ortho Anapc1_predicted Map1lc3b ortho Eef2 Map1lc3b ortho Map1lc3b Sptbn1 ortho Brd3 Map1lc3b ortho Phb2 Map1lc3b ortho Map1lc3b Map1lc3a ortho LOC690372 Map1lc3b ortho Protein LOC100910882, RNA binding motif protein 39, RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f Map1lc3b ortho RGD1304842_predicted Map1lc3b ortho Dyx1c1 Map1lc3b ortho RGD1566426_predicted Map1lc3b ortho Map1lc3b Eef1g ortho Snrpb Map1lc3b ortho Ret Map1lc3b ortho Mmp2 Map1lc3b ortho Bub3 Map1lc3b ortho Map1lc3b Nsmaf ortho Protein Tbc1d15, TBC1 domain family, member 15 Map1lc3b ortho Cct2 Map1lc3b ortho Prkar1a Map1lc3b ortho Csta_predicted Map1lc3b ortho RGD1308221_predicted Map1lc3b ortho Rpl22 Map1lc3b ortho Cltc Map1lc3b ortho Mybl2_predicted Map1lc3b ortho RGD1564549_predicted Map1lc3b ortho Map1lc3b Krt13 ortho Snrpd1_predicted Map1lc3b ortho Tgm3 Map1lc3b ortho Fam134a Map1lc3b ortho Eps8 Map1lc3b ortho C1qbp Map1lc3b ortho Gys1 Map1lc3b ortho Eukaryotic translation elongation factor 1 beta 2, Protein Eef1b2, RCG22471, isoform CRA_b Map1lc3b ortho Sfpq Map1lc3b ortho Ssbp1 Map1lc3b ortho Map1lc3b Krt5 ortho Map1lc3b Ddx1 ortho Map1lc3b Atg7 ortho Gmps Map1lc3b ortho Map1lc3b Krt24 ortho Map1lc3b Fas ortho Eef1a1 Map1lc3b ortho Gpr21_predicted Map1lc3b ortho Map1lc3b Tax1bp1 ortho Bag4 Map1lc3b ortho LOC679312 Map1lc3b ortho RGD1310147_predicted Map1lc3b ortho LOC103694876 Map1lc3b ortho LOC299827 Map1lc3b ortho Vars Map1lc3b ortho Pkm Map1lc3b ortho Tbc1d17_predicted Map1lc3b ortho Slc25a5 Map1lc3b ortho Protein Srsf7, RCG61762, isoform CRA_d Map1lc3b ortho Map1lc3b Map1lc3b ortho Tra2a Map1lc3b ortho Eef1a2 Map1lc3b ortho Map1lc3b LOC683746 ortho Atp5a1 Map1lc3b ortho Flnc Map1lc3b ortho Plec Map1lc3b ortho Pink1_predicted Map1lc3b ortho Map1lc3b Hnrnpm ortho Vim Map1lc3b ortho Map1lc3b Hnrnph2 ortho Nup210 Map1lc3b ortho Hnrpr Map1lc3b ortho Map1lc3b Krt77 ortho Ncl Map1lc3b ortho Mif Map1lc3b ortho Map1lc3b Krt14 ortho Dhx9_predicted Map1lc3b ortho Map1lc3b Src ortho Protein Atg2a, RCG47388 Map1lc3b ortho Dbi Map1lc3b ortho Rnf123 Map1lc3b ortho Map1lc3b Serine hydroxymethyltransferase ortho Capzb Map1lc3b ortho Tcp1 Map1lc3b ortho Map1lc3b Casp8 ortho Tial1_mapped Map1lc3b ortho Protein Wdr48 Map1lc3b ortho Prkci Map1lc3b ortho Cacna1b Map1lc3b ortho Fasn Map1lc3b ortho Map1lc3b Igf2bp1 ortho Eed_predicted Map1lc3b ortho Protein Lrrc47 Map1lc3b ortho Map1lc3b Dync1li1 ortho Sqstm1 Map1lc3b ortho Protein Ruvbl2, RuvB-like 2 (E. coli) Map1lc3b ortho Map1lc3b LOC100909476 ortho Map1lc3b Prdx3 ortho Map1lc3b Gpi ortho LOC685144 protein, Protein Sec24c, RCG41932 Map1lc3b ortho Nudt1 Map1lc3b ortho Protein Foxk1 Map1lc3b ortho Rplp0 Map1lc3b ortho Ncoa5_predicted Map1lc3b ortho Pre-mRNA processing factor 8, isoform CRA_a, Protein Prpf8 Map1lc3b ortho Ptbp1 Map1lc3b ortho Nudt21 Map1lc3b ortho 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans), isoform CRA_b, Protein Nipsnap1 Map1lc3b ortho Rassf5 Map1lc3b ortho Timm50 Map1lc3b ortho Hspb1 Map1lc3b ortho Map1lc3b Hsph1 ortho Fyco1_predicted Map1lc3b ortho Map1lc3b Aldh1b1 ortho Scoc Map1lc3b ortho Disks large-associated protein 3, RCG62665 Map1lc3b ortho Hspd1 Map1lc3b ortho Map1lc3b Add1 ortho Sec23a_predicted Map1lc3b ortho Map1lc3b Pef1 ortho Fundc1 Map1lc3b ortho RGD1309504_predicted Map1lc3b ortho Map1lc3b Aifm1 ortho Map1lc3b Hnrpu ortho Aamp_predicted Map1lc3b ortho Protein Zfp207, RCG33491, isoform CRA_b, Zinc finger protein 207 Map1lc3b ortho Clta Map1lc3b ortho Gabarapl2 Map1lc3b ortho Map1b Map1lc3b ortho Map1lc3b Ctnnb1 ortho Hnrnpa1 Map1lc3b ortho Pdhb Map1lc3b ortho LOC498174 Map1lc3b ortho Hspa9 Map1lc3b ortho Eno1 Map1lc3b ortho RGD1562231_predicted Map1lc3b ortho Map1lc3b Hnrnpf ortho Protein Thap7, THAP domain containing 7, isoform CRA_b Map1lc3b ortho Dbn1 Map1lc3b ortho Ampd1 Map1lc3b ortho Map1lc3b Bnip3l ortho Hadhb Map1lc3b ortho Kcnh2 Map1lc3b ortho Map1lc3b Krt1 ortho Tp53 Map1lc3b ortho Trim21_predicted Map1lc3b ortho Rpl4 Map1lc3b ortho Protein Rassf1, Ras association (RalGDS/AF-6) domain family 1, isoform CRA_b, Ras association domain family 1 isoform A Map1lc3b ortho Chaperonin containing Tcp1, subunit 6A (Zeta 1), Chaperonin subunit 6a (Zeta), Protein Cct6a Map1lc3b ortho Iars_predicted Map1lc3b ortho Ctps Map1lc3b ortho Ssb Map1lc3b ortho Nbr1 Map1lc3b ortho Gstp1 Map1lc3b ortho Map1lc3b Glo1 ortho Protein Cul9 Map1lc3b ortho Dok1 Map1lc3b ortho Rps14 Map1lc3b ortho Safb Map1lc3b ortho

PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants Q62625 fluorescence technology 19959994 colocalization C 4 Q62625 Q99IB8 confocal microscopy 21835792 colocalization X 2 Q62625 Q9UIL1 fluorescence microscopy 22354037 colocalization X 2 Q62625 F1BA49 confocal microscopy 24478431 colocalization X 2 Q62625 anti tag coimmunoprecipitation 20417604 association C 5 Q62625 confocal microscopy 20417604 colocalization C 3 P13473 Q62625 fluorescence technology 19959994 colocalization X 2 Q62625 A0A024R438 fluorescence microscopy 21169990 colocalization X 2

PPI - PINA Gene A Gene B Method Publications Species A Species B Interaction Type Source Database Interaction Identidiers Experimental Role(s) Interactor A Experimental Role(s) Interactor B Map1lc3b Map1lc3b MI:0007(anti tag coimmunoprecipitation) 21835792 taxid:10116(Rattus norvegicus) taxid:10116(Rattus norvegicus) MI:0403(colocalization) (intact) UniProt_185076 neutral component neutral component Snca Map1lc3b MI:0004(affinity chromatography technology) 16854843 taxid:10116(Rattus norvegicus) taxid:10116(Rattus norvegicus) MI:0915(physical association) (biogrid) BIOGRID_335603 bait prey

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q62625 O14920 MAP1LC3B IKBKB 0.126 19959994 Q9UIL1 Q62625 SCOC MAP1LC3B 0.126 22354037 Q62625 P68370 MAP1LC3B TUBA1A 0.309 7908909 Q7Z3C6 Q62625 ATG9A MAP1LC3B 0.126 21169990 Q62625 P13473 MAP1LC3B LAMP2 0.126 19959994 Q62625 P42858 MAP1LC3B HTT 0.309 20417604 Q62625 P37377 MAP1LC3B SNCA 0.126 16854843 Q62625 P63167 MAP1LC3B DYNLL1 0.126 14760703