DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000547 rno-miR-322* 293454 Ubfd1 acaacgucGCGAAGUACAAa :|: ||||||| aaauauuuUGUAUCAUGUUu 2 13 1428 1447 [rn4:1:180899986-180900005:+] 0.5633 144 7 -9.94 -1.0563 MIMAT0000554 rno-miR-324-3p 293454 Ubfd1 ggucguCGUGG-ACCCCGUCACc | ||| | ||||||| gcuuuuGGACCUUCUGGCAGUGa 2 17 785 807 [rn4:1:180899343-180899365:+] 0.4946 147 7 -19.03 -0.2445 MIMAT0004645 rno-miR-148b-5p 293454 Ubfd1 ggacucacauauuguCUUGAAg |||||| ccauuagcuuaauuuGAACUUa 2 8 174 195 [rn4:1:180901123-180901144:+] 0.6528 120 6 -6.58 -0.3538 MIMAT0004655 rno-miR-345-3p 293454 Ubfd1 agaGGUCUGGGG-AUCAAGUCCc ::|||::|| |||||||| ugcUUAGAUUCCAAAGUUCAGGg 2 20 469 491 [rn4:1:180899027-180899049:+] 0.4926 162 7 -29.23 -0.3137 MIMAT0000599 rno-miR-349 293454 Ubfd1 ucuccaauucuGUCGUCCCGac || |||||| -----auuuuuCA-CAGGGCau 3 12 1 16 [rn4:1:180898559-180898574:+] 0.5256 121 0 -11.91 -0.1804 MIMAT0004705 rno-let-7b* 293454 Ubfd1 cccuuccgUCAUCCAACAUAuc | || |||||| uaguuguaAAUAUUUUGUAUca 3 15 1421 1442 [rn4:1:180899979-180900000:+] 0.5633 126 0 -4.02 -0.1466 MIMAT0004709 rno-miR-10a-3p 293454 Ubfd1 auaaggggaucuaugCUUAAAc |||||| augaauguugauuuaGAAUUUa 2 8 1093 1114 [rn4:1:180899651-180899672:+] 0.5247 120 6 -5.34 -0.1196 MIMAT0004711 rno-miR-21* 293454 Ubfd1 cugUCGGGUAGCUGACG-ACAAc :||||| | ||| |||| uggGGCCCAGGGCAUGCUUGUUu 2 20 392 414 [rn4:1:180898950-180898972:+] 0.4982 123 0 -19.35 -0.1621 MIMAT0004716 rno-miR-28* 293454 Ubfd1 agGUC-CU-CGAG--UGUUAGAU-CAc ||| || |:|: |||||||| || caCAGAGAUGUUUGGACAAUCUAUGUg 2 21 629 655 [rn4:1:180899187-180899213:+] 0.5146 125 0 -20.87 -0.6408 MIMAT0004720 rno-miR-30e* 293454 Ubfd1 cgaCAUUUGUAGGCUGACUUUc || || |||||||| gcaGUCUUCAGAAGACUGAAAa 2 20 38 59 [rn4:1:180898596-180898617:+] 0.5256 147 7 -12.60 -0.5706 MIMAT0004721 rno-miR-30b-3p 293454 Ubfd1 cuGCAUUUGUAGGU-GUA-GGGUc :|||: |||:: ||| |||| cuUGUAGUGAUCUGCCAUGCCCAg 2 21 334 357 [rn4:1:180898892-180898915:+] 0.5005 123 0 -19.27 -0.1286 MIMAT0004722 rno-miR-30d* 293454 Ubfd1 cgUCGUUUGUAG---ACUGACUUUc ||||: | || |||||||| aaAGCAGUCUUCAGAAGACUGAAAa 2 21 35 59 [rn4:1:180898593-180898617:+] 0.5256 155 7 -17.76 -0.5706 MIMAT0000809 rno-miR-30a* 293454 Ubfd1 cgaCGUUUGUAG---GCUGACUUUc |||: | || |||||||| aaaGCAGUCUUCAGAAGACUGAAAa 2 20 35 59 [rn4:1:180898593-180898617:+] 0.5256 150 7 -16.27 -0.5706 MIMAT0004723 rno-miR-34c* 293454 Ubfd1 ggaccGACACACCAAUCACUAa || | | | ||||||| aaucuCUCUCUUG-UAGUGAUc 2 18 325 345 [rn4:1:180898883-180898903:+] 0.5005 147 7 -8.91 -0.1205 MIMAT0004739 rno-miR-204* 293454 Ubfd1 uuGCAGGGAAACGG--AAGGGUCg :|||| | |: ||||||| ugUGUCCAUGACCUUGUUCCCAGu 2 21 91 114 [rn4:1:180898649-180898672:+] 0.5256 147 7 -23.08 -0.2987 MIMAT0004740 rno-miR-218* 293454 Ubfd1 gcgcCACGAACUGUCUUG-GUAc || :|| |::|||| ||| gcuuGUUUUUCAUGGAACUCAUc 2 19 407 429 [rn4:1:180898965-180898987:+] 0.4982 126 0 -10.20 -0.2155 MIMAT0000893 rno-miR-290 293454 Ubfd1 uuuuucACGGGGGUAUCAAACUc ||:|: | ||||||| aacauuUGUCUGAACAGUUUGAc 2 18 971 993 [rn4:1:180899529-180899551:+] 0.5247 153 7 -11.19 -0.1038 MIMAT0000894 rno-miR-291a-5p 293454 Ubfd1 ucucucccggAGGUGAAACUAc | | ||||||| caguucacagUGCUCUUUGAUu 2 13 1315 1336 [rn4:1:180899873-180899894:+] 0.5247 144 7 -9.28 -0.6408 MIMAT0000898 rno-miR-296* 293454 Ubfd1 ugUCCUAA------CUCC-CCCCCGGGa |||||| |||| ||||||| ccAGGAUUCUUUGGGAGGAUGGGGCCCa 2 20 373 400 [rn4:1:180898931-180898958:+] 0.4982 149 7 -30.71 -0.3463 MIMAT0003116 rno-miR-501 293454 Ubfd1 aaaGUGGGUCCCUGUUUCCUAa || :|| | | ||||||| gggCAAUCA-GUAAAAAGGAUu 2 20 661 681 [rn4:1:180899219-180899239:+] 0.5114 153 7 -15.74 -0.5667 MIMAT0003162 rno-miR-1* 293454 Ubfd1 ccCAUGUAUUUC-UUCAUA-CACg || : ||||| ||||| ||| ccGUUUUUAAAGUCAGUAUGGUGg 2 21 232 255 [rn4:1:180901181-180901204:+] 0.6528 127 0 -11.76 -1.0959 MIMAT0003175 rno-miR-543* 293454 Ubfd1 ucUUCACGU-GGCGCUUACAAa || ||:: :| :||||||| aaAAUUGUGUUCAUGAAUGUUg 2 20 1081 1102 [rn4:1:180899639-180899660:+] 0.5247 154 7 -13.11 -0.8815 MIMAT0003175 rno-miR-543* 293454 Ubfd1 ucUUCACGUGGCG---CU-UACAAa |||| ||: || || ||||| ccAAGUCCAUGGCACAGAGAUGUUu 2 20 617 641 [rn4:1:180899175-180899199:+] 0.5146 122 0 -11.60 -0.1223 MIMAT0005278 rno-miR-466b 293454 Ubfd1 guACCUGUAUGUGUGUGUGUau || || ||||||||||| uuUGUUCACACACACACACAaa 3 21 95 116 [rn4:1:180901044-180901065:+] 0.6528 156 0 -20.28 -0.2577 MIMAT0005280 rno-miR-743b 293454 Ubfd1 agauAAGUCAUACCACAGAAAg ||| || ||||||| ggguUUCCUGCUGUUGUCUUUc 2 19 494 515 [rn4:1:180899052-180899073:+] 0.4870 150 7 -11.47 -0.1105 MIMAT0005280 rno-miR-743b 293454 Ubfd1 agaUAAGUCAU------ACCACAGAAAg |||||| | | ||||||| uagAUUCAGCAGUCCCCUUCUGUCUUUu 2 20 1165 1192 [rn4:1:180899723-180899750:+] 0.5247 142 7 -12.94 -0.4133 MIMAT0005283 rno-miR-872* 293454 Ubfd1 uccuccgaugacguuAUCAAGu |||||| uguugauuuagaauuUAGUUCa 2 8 1098 1119 [rn4:1:180899656-180899677:+] 0.5247 120 6 -9.08 -0.2111 MIMAT0005286 rno-miR-878 293454 Ubfd1 agaUGGGUCAUACCACAGUACg |:|| || | ||||||| caaAUCCUGU-U--UGUCAUGc 2 20 1006 1024 [rn4:1:180899564-180899582:+] 0.5247 146 7 -18.37 -0.1058 MIMAT0005286 rno-miR-878 293454 Ubfd1 agAUGGG-UCAUACCACA-GUACg |||:: || :| |||| |||| ucUACUUAAGAGUUGUGUCCAUGa 2 21 78 101 [rn4:1:180898636-180898659:+] 0.5256 127 0 -17.74 -0.4802 MIMAT0005297 rno-miR-147 293454 Ubfd1 aucGUCUUCGUAAAGGCGU-GUg |:|:|| | |||||| || ugcCGGGAG-AGGUCCGCAGCAu 2 20 49 70 [rn4:1:180900998-180901019:+] 0.6528 121 0 -21.43 -0.2144 MIMAT0005315 rno-miR-434 293454 Ubfd1 uccucagcucacuacCAAGUUu |||||| uugauuuagaauuuaGUUCAAa 2 8 1100 1121 [rn4:1:180899658-180899679:+] 0.5247 120 6 -6.62 -0.2289 MIMAT0005324 rno-miR-598-5p 293454 Ubfd1 gagcgugguagccgUAGUGGCg ||||||| aauuugaacuuaaaAUCACCGg 2 9 184 205 [rn4:1:180901133-180901154:+] 0.6528 140 7 -16.41 -1.1476 MIMAT0005328 rno-miR-673 293454 Ubfd1 gaGGUUCCUGGCCUCGACACUc |: || :||:||||||| ccCUUAGUUAUGGGGCUGUGAa 2 21 293 314 [rn4:1:180898851-180898872:+] 0.5028 156 7 -23.10 -0.2901 MIMAT0005333 rno-miR-742 293454 Ubfd1 aaaugggUUGUACCA-CCGAAAg ||||| | |||||| ugaugagAACAUCCUGGGCUUUg 2 16 805 827 [rn4:1:180899363-180899385:+] 0.5008 123 6 -12.33 -0.1702 MIMAT0012825 rno-miR-105 293454 Ubfd1 uggugucuguagacUCGUGAAc ||||||| -------------aAGCACUUu 2 9 1 9 [rn4:1:180900950-180900958:+] 0.6528 140 7 -9.30 -0.2953 MIMAT0012826 rno-miR-220 293454 Ubfd1 uccAGAGACUGUGACACCACc ||| |::: ||||||| caaUCUGAGGUGAUGUGGUGa 2 19 127 147 [rn4:1:180901076-180901096:+] 0.6528 154 7 -18.24 -1.0080 MIMAT0012830 rno-miR-504 293454 Ubfd1 cugucucACGUCUG-GUCCCAGa ||| || ||||||| ccuuuccUGCCUACUCAGGGUCa 2 16 713 735 [rn4:1:180899271-180899293:+] 0.4946 150 7 -18.09 -0.3240 MIMAT0012831 rno-miR-544 293454 Ubfd1 cucgaacgauuuuUACGUCUUa :||||||| aacucaucaguuuGUGCAGAAc 2 10 422 443 [rn4:1:180898980-180899001:+] 0.4982 141 7 -11.60 -0.2937 MIMAT0012834 rno-miR-592 293454 Ubfd1 uguaguAGCGUAUAACUGUGUUa || || | |||||| cuuuguUCACACACACACACAAa 2 18 94 116 [rn4:1:180901043-180901065:+] 0.6528 121 6 -6.14 -0.2903 MIMAT0012843 rno-miR-876 293454 Ubfd1 accacuaagugucucUUUAGGu |||||| augguggaaauuaauAAAUCCa 2 8 249 270 [rn4:1:180901198-180901219:+] 0.6102 120 6 -16.18 -0.3760 MIMAT0012848 rno-miR-294 293454 Ubfd1 ucUAUC-CCGGAGGUAAAACuc |||| |: :|||||| ugAUAGUUGUAAAUAUUUUGua 3 20 1418 1439 [rn4:1:180899976-180899997:+] 0.5633 126 0 -11.30 -0.1579 MIMAT0012849 rno-miR-295 293454 Ubfd1 cuucacacgGGGUGUAAACUca |::| |||||| caccauuagCUUA-AUUUGAac 3 14 172 192 [rn4:1:180901121-180901141:+] 0.6528 123 0 -7.18 -0.2449 MIMAT0012850 rno-miR-465 293454 Ubfd1 guguggucgUGGCAAGAUUUAu |:| ||:||||| auguuuuaaAUC-UUUUAAAUa 2 14 1442 1462 [rn4:1:180900000-180900020:+] 0.5633 131 0 -8.20 -0.1332 MIMAT0012852 rno-miR-667 293454 Ubfd1 gaACCCGACCCACC----GUCCA-CAGu |||||| |||| :|||| ||| ccUGGGCUUUGUGGUCAUUAGGUAGUCu 2 22 817 844 [rn4:1:180899375-180899402:+] 0.5008 128 0 -26.85 -0.1830 MIMAT0012853 rno-miR-761 293454 Ubfd1 acaCAGUCAAAGUGGGACGACg || :| || :||||||| aggGUGGGGUU--UCCUGCUGu 2 20 488 507 [rn4:1:180899046-180899065:+] 0.4870 148 7 -20.93 -0.3345 MIMAT0001619 rno-miR-322 293454 Ubfd1 agGUU-UUGUAC-UUA--ACGACGAc ||: |:| || |:| ||||||| uuCAGUAGCUUGUAGUGAUGCUGCUa 2 21 527 552 [rn4:1:180899085-180899110:+] 0.5146 149 7 -14.35 -0.4058 MIMAT0000602 rno-miR-20a 293454 Ubfd1 gauggacgugauaUUCGUGAAAu ||||||||| -------------AAGCACUUUc 2 11 1 10 [rn4:1:180900950-180900959:+] 0.6528 150 7 -9.50 -0.2434 MIMAT0000608 rno-miR-351 293454 Ubfd1 agUCCGAGUUUCCCGAGGAGUCCCu :| ||: | || ||||||| guGGCCUUUCCUGCCUACUCAGGGu 2 24 709 733 [rn4:1:180899267-180899291:+] 0.4946 151 7 -19.28 -0.1098 MIMAT0000784 rno-miR-15b 293454 Ubfd1 acAUUUGGUACUAC-ACGACGAu ||: :::| :|| ||||||| agUAGCUUGUAGUGAUGCUGCUa 2 21 530 552 [rn4:1:180899088-180899110:+] 0.5146 155 7 -18.37 -0.4058 MIMAT0000785 rno-miR-16 293454 Ubfd1 gcGGUUAU--AA-AU-GC-ACGACGAu :||:|| || || :| ||||||| cuUCAGUAGCUUGUAGUGAUGCUGCUa 2 21 526 552 [rn4:1:180899084-180899110:+] 0.5146 148 7 -17.68 -0.3966 MIMAT0000785 rno-miR-16 293454 Ubfd1 gcgguUAUAAAU-GCAC-GACGAu :|||||: : || ||||| caaacGUAUUUGUUUUGCCUGCUc 2 18 884 907 [rn4:1:180899442-180899465:+] 0.5122 120 0 -12.45 -0.9663 MIMAT0000786 rno-miR-17-5p 293454 Ubfd1 gauggacgugacaUUCGUGAAAc ||||||||| -------------AAGCACUUUc 2 11 1 10 [rn4:1:180900950-180900959:+] 0.6528 150 7 -9.38 -0.2434 MIMAT0000801 rno-miR-29b 293454 Ubfd1 uuguGACUAAAGUUUACCAC-GAu |||| | | :||||| || caauCUGAGGUGAUGUGGUGACUg 2 20 127 150 [rn4:1:180901076-180901099:+] 0.6528 123 0 -16.50 -0.7232 MIMAT0000817 rno-miR-93 293454 Ubfd1 gauggacgugcuugUCGUGAAAc |||||||| -------------aAGCACUUUc 2 10 1 10 [rn4:1:180900950-180900959:+] 0.6528 145 7 -9.14 -0.2434 MIMAT0000818 rno-miR-96 293454 Ubfd1 ucguuuUUACACGAUCACGGUUu |:| | |:||||||| agggucAGUUGGGUGGUGCCAAa 2 18 729 751 [rn4:1:180899287-180899309:+] 0.4946 153 7 -19.80 -0.1436 MIMAT0000824 rno-miR-103 293454 Ubfd1 agUAUCGGGACAU-GUUACGACGa :||| |:|||| ::||||||| caGUAG-CUUGUAGUGAUGCUGCu 2 22 529 551 [rn4:1:180899087-180899109:+] 0.5146 166 7 -22.00 -0.1834 MIMAT0000825 rno-miR-106b 293454 Ubfd1 uagacgugacagUCGUGAAAu |||||||| -----------aAGCACUUUc 2 10 1 10 [rn4:1:180900950-180900959:+] 0.6528 145 7 -9.26 -0.2434 MIMAT0000826 rno-miR-107 293454 Ubfd1 acUAUCGGGACAU-GUUACGACGa :||| |:|||| ::||||||| caGUAG-CUUGUAGUGAUGCUGCu 2 22 529 551 [rn4:1:180899087-180899109:+] 0.5146 166 7 -21.81 -0.1834 MIMAT0000829 rno-miR-125a-5p 293454 Ubfd1 aguguccaauuucccaGAGUCCCu ||||||| uggccuuuccugccuaCUCAGGGu 2 9 710 733 [rn4:1:180899268-180899291:+] 0.4946 140 7 -17.15 -0.1076 MIMAT0000830 rno-miR-125b-5p 293454 Ubfd1 aguguucaaucccaGAGUCCCu ||||||| gccuuuccugccuaCUCAGGGu 2 9 712 733 [rn4:1:180899270-180899291:+] 0.4946 140 7 -14.94 -0.1098 MIMAT0000840 rno-miR-134 293454 Ubfd1 ggGGAGACCAGUUGGUCAGUgu |||:| |:: |||||| ucCCUUU-CUUG--CAGUCAgc 3 21 207 225 [rn4:1:180901156-180901174:+] 0.6528 123 0 -17.97 -0.1170 MIMAT0000841 rno-miR-135a 293454 Ubfd1 agUGUAUCCUUAUUUUUC-GGUAu | :|: || || ||| |||| guAGGUGAGAUUACCAAGUCCAUg 2 22 604 627 [rn4:1:180899162-180899185:+] 0.5146 121 0 -10.82 -0.1849 MIMAT0000853 rno-miR-150 293454 Ubfd1 gugaccauguucccAACCCUCu ||||||| guagccaggauucuUUGGGAGg 2 9 369 390 [rn4:1:180898927-180898948:+] 0.4982 140 7 -15.43 -0.1467 MIMAT0000857 rno-miR-181c 293454 Ubfd1 ugaguggcuguccaACUUACAa ||||||| aaaaauuguguucaUGAAUGUu 2 9 1080 1101 [rn4:1:180899638-180899659:+] 0.5247 140 7 -10.33 -0.9166 MIMAT0000858 rno-miR-181a 293454 Ubfd1 ugaguggcUGUCGCA---ACUUACAa |: |:|| ||||||| uuuaaaaaAUUGUGUUCAUGAAUGUu 2 16 1076 1101 [rn4:1:180899634-180899659:+] 0.5247 142 7 -11.29 -0.9199 MIMAT0000859 rno-miR-181b 293454 Ubfd1 uggguggcugucguUACUUACAa |||||||| aaaaaauuguguucAUGAAUGUu 2 10 1079 1101 [rn4:1:180899637-180899659:+] 0.5247 145 7 -12.07 -0.9199 MIMAT0000863 rno-miR-186 293454 Ubfd1 ucGGGUUUUCCUCUUAAGAAAc |:: || | ||||:||| auCUUUUAAAUAAAAUUUUUUu 2 21 1451 1472 [rn4:1:180900009-180900030:+] 0.5633 136 0 -3.99 -0.1384 MIMAT0000863 rno-miR-186 293454 Ubfd1 ucgGGU-UUUCCUCUUAAGAAAc ||| || || | |||||| ggaCCACAAUAGAUACUUCUUUa 2 20 1057 1079 [rn4:1:180899615-180899637:+] 0.5247 130 6 -8.69 -0.1399 MIMAT0000870 rno-miR-195 293454 Ubfd1 cgGUUAU--AAAG--AC-ACGACGAu ||:|| || : || ||||||| uuCAGUAGCUUGUAGUGAUGCUGCUa 2 20 527 552 [rn4:1:180899085-180899110:+] 0.5146 144 7 -17.16 -0.3966 MIMAT0000870 rno-miR-195 293454 Ubfd1 cgguUAUAAA-GACAC-GACGAu :||||| :| || ||||| aaacGUAUUUGUUUUGCCUGCUc 2 18 885 907 [rn4:1:180899443-180899465:+] 0.5122 124 0 -9.96 -0.9663 MIMAT0000880 rno-miR-208 293454 Ubfd1 ugUUCGAAAAAC-GA-GCAGAAUa || : || || || ||||||| gaAAUUCUUCUGUCUCCGUCUUAu 2 21 176 199 [rn4:1:180898734-180898757:+] 0.5256 154 7 -13.41 -0.4604 MIMAT0000885 rno-miR-214 293454 Ubfd1 gacggacagacACGGACGACa | ||||||| cagggugggguUUCCUGCUGu 2 11 487 507 [rn4:1:180899045-180899065:+] 0.4870 142 7 -16.69 -0.3400 MIMAT0000886 rno-miR-216a 293454 Ubfd1 aguGUCAACGGUCGACUCUAAu || ||| :|| ||||||| uucCAAUUG-UAGGUGAGAUUa 2 20 596 616 [rn4:1:180899154-180899174:+] 0.5146 161 7 -17.28 -0.3704 MIMAT0000889 rno-miR-219-5p 293454 Ubfd1 ucuuaacGCAAACCUGUUAGu :|||||||||||| acagagaUGUUUGGACAAUCu 2 15 630 650 [rn4:1:180899188-180899208:+] 0.5146 166 7 -22.84 -0.2334 MIMAT0000895 rno-miR-291a-3p 293454 Ubfd1 ccguguguuucaccUUCGUGAAa |||||||| --------------AAGCACUUu 2 10 1 9 [rn4:1:180900950-180900958:+] 0.6528 145 7 -11.68 -0.2953 MIMAT0000903 rno-miR-320 293454 Ubfd1 agcGGGAGAGU-UGGGUCGAAaa |::|||:: | :|||||| uccCUUUCUUGCAGUCAGCUUca 3 20 207 229 [rn4:1:180901156-180901178:+] 0.6528 138 0 -20.87 -0.1480 MIMAT0001549 rno-miR-365 293454 Ubfd1 uauuccUAAAAA-U-CCCCGUAAu |||||| | ||||||| ------AUUUUUCACAGGGCAUUu 2 17 1 18 [rn4:1:180898559-180898576:+] 0.5256 154 7 -11.12 -1.0400 MIMAT0001628 rno-miR-433 293454 Ubfd1 uguggcuccucggguAGUACUa |||||| uuuaaaaaauuguguUCAUGAa 2 8 1076 1097 [rn4:1:180899634-180899655:+] 0.5247 120 6 -6.58 -0.1135 MIMAT0003123 rno-miR-377 293454 Ubfd1 ggUUUUCAACGGA-AACA-CACUa |||| | :|| |||| |||| aaAAAAUCUCUCUCUUGUAGUGAu 2 21 321 344 [rn4:1:180898879-180898902:+] 0.5005 127 0 -10.33 -0.2087 MIMAT0003193 rno-miR-494 293454 Ubfd1 uccAAAGGGCAC-AUACAAAGu |||:: | | |||||||| ugaUUUUUAGAGUUAUGUUUCa 2 19 1332 1353 [rn4:1:180899890-180899911:+] 0.5247 157 7 -11.95 -1.1423 MIMAT0003193 rno-miR-494 293454 Ubfd1 uccAAAGGGCACA-UACAAAGu | |:::|| | ||||||: aaaUAUUUUGUAUCAUGUUUUa 2 19 1428 1449 [rn4:1:180899986-180900007:+] 0.5633 137 0 -9.83 -0.2115 MIMAT0003194 rno-miR-376c 293454 Ubfd1 ugCACUUUAAA---G-GAGAUACAa | || :||| | ||||||| caGAGAUGUUUGGACAAUCUAUGUg 2 20 631 655 [rn4:1:180899189-180899213:+] 0.5146 141 7 -9.80 -0.5424 MIMAT0003199 rno-miR-381 293454 Ubfd1 cucucgaacgGGAACAUAu ::|||||| guuguaaauaUUUUGUAUc 2 10 1423 1441 [rn4:1:180899981-180899999:+] 0.5633 125 6 -5.60 -0.1048 MIMAT0003208 rno-miR-374 293454 Ubfd1 gugAAUCGUCCAACAUAA-UAUa ||| ||| | ||||| ||| cugUUAACAGUUAGUAUUGAUAu 2 20 918 940 [rn4:1:180899476-180899498:+] 0.5185 135 0 -7.81 -0.5864 MIMAT0003211 rno-miR-20b-5p 293454 Ubfd1 uggacgugauacUCGUGAAAc |||||||| -----------aAGCACUUUc 2 10 1 10 [rn4:1:180900950-180900959:+] 0.6528 145 7 -8.94 -0.2434 MIMAT0003383 rno-miR-497 293454 Ubfd1 auGUUUGGUGUCAC-ACGACGAc :|: ::::|||| ||||||| agUAGCUUGUAGUGAUGCUGCUa 2 21 530 552 [rn4:1:180899088-180899110:+] 0.5146 159 7 -20.16 -0.4089 MIMAT0005284 rno-miR-874 293454 Ubfd1 agccagggagcccgGUCCCGUc ||||||| ------auuuuucaCAGGGCAu 2 9 1 16 [rn4:1:180898559-180898574:+] 0.5256 140 7 -15.82 -1.2661 MIMAT0005299 rno-miR-181d 293454 Ubfd1 uggguggcuguuguUACUUACAa |||||||| aaaaaauuguguucAUGAAUGUu 2 10 1079 1101 [rn4:1:180899637-180899659:+] 0.5247 145 7 -12.31 -0.9166 MIMAT0005303 rno-miR-196c 293454 Ubfd1 ggGUUGUUGUG-CUU----UG-AUGGAu ||| ||:|| ||| || ||||| uuCAAAAAUACAGAAAAGGACAUACCUu 2 21 1350 1377 [rn4:1:180899908-180899935:+] 0.5247 122 0 -15.76 -0.6541 MIMAT0005312 rno-miR-411 293454 Ubfd1 gcAUGCGAUAUGCCAGAUGAu ||| :| | : ||||||| uuUACAUUUUCUUGUCUACUu 2 20 64 84 [rn4:1:180898622-180898642:+] 0.5256 155 7 -11.18 -0.8041 MIMAT0005320 rno-miR-495 293454 Ubfd1 uucuucACGUGGUACAAACAAa || |::| ||||||| cuuauuUGGAUUA-GUUUGUUu 2 17 195 215 [rn4:1:180898753-180898773:+] 0.5256 150 7 -11.31 -0.5397 MIMAT0005341 rno-miR-488 293454 Ubfd1 cugguucuuugucGGAAAGUu ||||||| uuuuuggccugguCCUUUCAc 2 9 940 960 [rn4:1:180899498-180899518:+] 0.5247 140 7 -12.52 -0.4875

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G116308 Ubfd1 Rattus norvegicus 293454

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ubfd1; RGD1306614; rCG_39770 rno-miR-127 49 66 UCGGUUCGAGUCUGCCUAGGCU |||::| ||| |:|||| UGCCGGG---AGA--GGUCCGC Ubfd1; RGD1306614; rCG_39770 rno-miR-132 10 32 GCUGGU-ACCGACA--UCUGACAAU ||| |||| |||||| -CACCUCUGGCCCAGGAGACUGA-- Ubfd1; RGD1306614; rCG_39770 rno-miR-133a 63 97 -UGUCG-----ACC-AAC--UUC----CCCUGGUU :|||| ||| ||| :|| |||||: CGCAGCAUCCCUGGAUUGCAGAGUUCUGGGACUU- Ubfd1; RGD1306614; rCG_39770 rno-miR-133b 72 97 AUCGACC-AAC--UUC----CCCUGGUU |||| ||| :|| |||||: --CCUGGAUUGCAGAGUUCUGGGACUU- Ubfd1; RGD1306614; rCG_39770 rno-miR-146 70 93 UUGGGUACCUUAAG--UCAAGAGU- ||| |||| | |||||| : -UCCC-UGGAUUGCAGAGUUCUGGG Ubfd1; RGD1306614; rCG_39770 rno-miR-17 72 100 UGAUG-GACGUGACAU--UCGUGAAAC- ||: :|||| || :| |||||| CCUGGAUUGCAGAGUUCUGGGACUUUGU Ubfd1; RGD1306614; rCG_39770 rno-miR-204 16 44 UCCGUAUCCU---ACUG--UUUCCCUU- ||| |||| |||| |||| ||| UGGCCCAGGAGACUGACCCAAAGUGAAG Ubfd1; RGD1306614; rCG_39770 rno-miR-205 12 47 GUCUGAGGCCA---CCU------------UACUUCCU- |||:|| ||| :||||||| ---CCUCUGGCCCAGGAGACUGACCCAAAGUGAAGGAC Ubfd1; RGD1306614; rCG_39770 rno-miR-207 35 63 -UUC-CCUCCUCU--CGGUCCUCUUCG- ||| | |||| |||:|||||:|: AAAGUGAAGGACAUUGCCGGGAGAGGUC Ubfd1; RGD1306614; rCG_39770 rno-miR-20b* 55 85 GUCUUCA--CGA-GUG------UGACGUCA |||:|| || ||: |:||||| GAGAGGUCCGCAGCAUCCCUGGAUUGCAGA Ubfd1; RGD1306614; rCG_39770 rno-miR-212 16 32 -CCGGCACUGACCUCUGACAAU |||| |||||||| UGGCCCA----GGAGACUGA-- Ubfd1; RGD1306614; rCG_39770 rno-miR-22* 22 48 -UUUC-GAAC-GGUG--ACUUCUUGA ::|| || ||| |||||:|| AGGAGACUGACCCAAAGUGAAGGACA Ubfd1; RGD1306614; rCG_39770 rno-miR-23a 127 147 CCUUUAGGGACCGUUACACUA- ||||: ||::|||||:| --CAAUCUGAGGUGAUGUGGUG Ubfd1; RGD1306614; rCG_39770 rno-miR-23b 127 147 CCAUUAGGGACCGUUACACUA- ||||: ||::|||||:| --CAAUCUGAGGUGAUGUGGUG Ubfd1; RGD1306614; rCG_39770 rno-miR-24 135 158 GACAAGGACGAC-UUGAC-UCGGU- || ||: :|||| ||||| -GGUGA-UGUGGUGACUGAAGCCAG Ubfd1; RGD1306614; rCG_39770 rno-miR-296 41 65 UGUCCU--AACUCCCC-C-CCGGGA |||| ||| ||| | ||:|| -AAGGACAUUGCCGGGAGAGGUCCG Ubfd1; RGD1306614; rCG_39770 rno-miR-29a 230 259 UUGGCUAA------AGUC-UACCACGAU- |||| |||| |||||| | UACCGUUUUUAAAGUCAGUAUGGUGGAAA Ubfd1; RGD1306614; rCG_39770 rno-miR-29b 130 152 UUGUGACUAAAGUUUACCAC-GAU- |||| | | :||||| ||: ---UCUGAGGUGAUGUGGUGACUGA Ubfd1; RGD1306614; rCG_39770 rno-miR-29c 230 259 -UGGCUAAAGUU-------UACCACGAU- |||| |||:|| |||||| | UACCGUUUUUAAAGUCAGUAUGGUGGAAA Ubfd1; RGD1306614; rCG_39770 rno-miR-30c 77 106 CGAC-UCUCAC-AUCCU---ACAAAUGU- :|| ||||| |:||| |||| ||| AUUGCAGAGUUCUGGGACUUUGUUCACAC Ubfd1; RGD1306614; rCG_39770 rno-miR-30d 77 106 GAAGGUC---AGCCCCU---ACAAAUGU- || ||| || |||| |||| ||| AUUGCAGAGUUCUGGGACUUUGUUCACAC Ubfd1; RGD1306614; rCG_39770 rno-miR-322 214 232 ACAACGUCG--CGAAGUACAAA ||||||: ||||||| -CUUGCAGUCAGCUUCAUA--- Ubfd1; RGD1306614; rCG_39770 rno-miR-324-3p 61 93 -GGUCGUCGU--GGACCC--CGUC-----ACC- || |||||| ||||| |||| ||| UCC-GCAGCAUCCCUGGAUUGCAGAGUUCUGGG Ubfd1; RGD1306614; rCG_39770 rno-miR-324-5p 146 168 UGUGGUUACGGGAUCCCCUACGC ||::| ||| ||| ||||: -GACUGAAGCCAGAGGUGAUGUA Ubfd1; RGD1306614; rCG_39770 rno-miR-326 22 59 UGACCUC-------------CUUCC-----CGGGUCUCC |||| ||||| ||| :||| --AGGAGACUGACCCAAAGUGAAGGACAUUGCCGGGAGA Ubfd1; RGD1306614; rCG_39770 rno-miR-328 37 66 UGC-CUUCC-----CG--UCUCUCCCGGUC | ||||| || :|||||| ||: -AGUGAAGGACAUUGCCGGGAGAGGUCCGC Ubfd1; RGD1306614; rCG_39770 rno-miR-338 220 258 -AGUUG--------------UUUUAGUGACUACGACCU- |||:| |||:||| | ||| |||| GUCAGCUUCAUACCGUUUUUAAAGUCAGU-AUGGUGGAA Ubfd1; RGD1306614; rCG_39770 rno-miR-347 139 166 -AC-CCGCUG-----GGUCUCC-CUGU || ||:||| ||||||| ||: AUGUGGUGACUGAAGCCAGAGGUGAUG Ubfd1; RGD1306614; rCG_39770 rno-miR-34a 25 55 -UUG-UUGG---UCGAU-UCUGUGACGGU- :|| :||| ||: :||||:||||: AGACUGACCCAAAGUGAAGGACAUUGCCGG Ubfd1; RGD1306614; rCG_39770 rno-miR-34b 36 54 GUUAGUCGAUUAAUGUGACGGAU ||: || |||:|||| ----AAGUGAAGGACAUUGCCG- Ubfd1; RGD1306614; rCG_39770 rno-miR-412 134 168 UGCCGAU-CACC--------UGG--UCCACUUCA- ||: |||| :|| |||||| || -AGGUGAUGUGGUGACUGAAGCCAGAGGUGAUGUA Ubfd1; RGD1306614; rCG_39770 rno-miR-422b 11 37 CGGAAGACUGAGGUUCA-------GGUCA || ||||:| |||:| ||| ACC-UCUGGC-CCAGGAGACUGACCCAA- Ubfd1; RGD1306614; rCG_39770 rno-miR-449 19 55 UGGUCGAUUG-------------UUAUGUGACGGU- |||| :|| | |||:||||: CCCAGGAGACUGACCCAAAGUGAAGGACAUUGCCGG Ubfd1; RGD1306614; rCG_39770 rno-miR-505 149 170 CCUUUGGUCGUUCACAAC-UG- |||:|||| |:||| || || UGAAGCCAG-AGGUGAUGUACU Ubfd1; RGD1306614; rCG_39770 rno-miR-540 3 22 GGUCCUAGCUGGAGACUGGA || || |||||||:|| GCACUUUC-ACCUCUGGCCC Ubfd1; RGD1306614; rCG_39770 rno-miR-541 37 76 ACACUGGUUGUAG----UCU------------UAGGGAA |||| :||||: :|| |||||| AGUGAAGGACAUUGCCGGGAGAGGUCCGCAGCAUCCCUG Ubfd1; RGD1306614; rCG_39770 rno-miR-132 9 33 gcUGG-UACC--GACAUCUGACaau ||| ||| | | |||||| tcACCTCTGGCCCAGGAGACTGacc Ubfd1; RGD1306614; rCG_39770 rno-miR-133a 69 97 ugucGACC-AACUUC------CCCUGguu |||| ||| || ||||| atccCTGGATTGCAGAGTTCTGGGACttt Ubfd1; RGD1306614; rCG_39770 rno-miR-133b 70 97 aucGACC-AACUUC------CCCUGguu |||| ||| || ||||| tccCTGGATTGCAGAGTTCTGGGACttt Ubfd1; RGD1306614; rCG_39770 rno-miR-146 68 91 uUGGGUACCUUAAG--UCAAGAgu |:|| |||| | | |||||| cATCCCTGGATTGCAGAGTTCTgg Ubfd1; RGD1306614; rCG_39770 rno-miR-17 68 98 ugAUGGACGUGACAU-------UCGUGAAAC | |||| |:|| | :| |||||| caTCCCTGGATTGCAGAGTTCTGGGACTTTG Ubfd1; RGD1306614; rCG_39770 rno-miR-205 24 45 gUCUGA--GGCCACCUUACUUCCU ||||| || |:||||||| gAGACTGACC--CAAAGTGAAGGA Ubfd1; RGD1306614; rCG_39770 rno-miR-207 36 61 UUC-CCUCCUCU--CGGUCCUCUUCg ||| | |||| | |||:|||||:| AAGTGAAGGACATTGCCGGGAGAGGt Ubfd1; RGD1306614; rCG_39770 rno-miR-212 17 33 CCGGCACUGACCUCUGACaau |||| | |||||||| GGCC----CAGGAGACTGacc Ubfd1; RGD1306614; rCG_39770 rno-miR-22* 23 47 uuUCGAAC--GG--UGACUUCUUGa || || || | |||||:|| ggAGACTGACCCAAAGTGAAGGACa Ubfd1; RGD1306614; rCG_39770 rno-miR-23a 125 145 ccuUUAGGGACCGUUACACUA ||||: ||::|||||:| ttcAATCTGAGGTGATGTGGT Ubfd1; RGD1306614; rCG_39770 rno-miR-23b 125 145 ccaUUAGGGACCGUUACACUA ||||: ||::|||||:| ttcAATCTGAGGTGATGTGGT Ubfd1; RGD1306614; rCG_39770 rno-miR-296 40 64 ugUCC--UAAC--UCCCCCCCGGGa ||| |||| :|| | ||:|| gaAGGACATTGCCGGGAGAGGTCCg Ubfd1; RGD1306614; rCG_39770 rno-miR-29b 127 150 uuguGACUAAAGUUUACCAC-GAu |||| | | :||||| || caatCTGAGGTGATGTGGTGACTg Ubfd1; RGD1306614; rCG_39770 rno-miR-29c 231 257 UGGCUAAAGUU-------UACCACgau |||| |||:|| |||||| ACCGTTTTTAAAGTCAGTATGGTGgaa Ubfd1; RGD1306614; rCG_39770 rno-miR-30c 80 104 CGACUCUCACAUCCU---ACAAAUGU || ||| | |:||| |||| ||| GCAGAG-TTCTGGGACTTTGTTCACA Ubfd1; RGD1306614; rCG_39770 rno-miR-322 213 237 ACAACGUC-G-CGAAGUA---CAAA | |||||| | ||||||| |||| TCTTGCAGTCAGCTTCATACCGTTT Ubfd1; RGD1306614; rCG_39770 rno-miR-324-3p 62 86 GGUCGUCGU--GGACC--CCGUCACc || |||||| ||||| |||| | CC-GCAGCATCCCTGGATTGCAGAGt Ubfd1; RGD1306614; rCG_39770 rno-miR-324-5p 145 167 ugUGGUUACGGGAUCCCCUACgc ||::| ||| ||| |||| tgACTGAAGCCAGAGGTGATGta Ubfd1; RGD1306614; rCG_39770 rno-miR-326 14 39 uGACC---UCCUU--CCCGGGUCUCc |||| ||||: | |||| || tCTGGCCCAGGAGACTGACCCAAAGt Ubfd1; RGD1306614; rCG_39770 rno-miR-338 235 256 aguugUUUUAGUGACUACGACCU |||:||| | ||| |||| tttttAAAGTCAGT-ATGGTGGA Ubfd1; RGD1306614; rCG_39770 rno-miR-347 140 165 AC-CCGCUG-----GGUCUCC-CUgu || ||:||| ||||||| || TGTGGTGACTGAAGCCAGAGGTGAtg Ubfd1; RGD1306614; rCG_39770 rno-miR-34a 26 53 uUG-UUGG---UCGAUU-CUGUGACGGu || :||| ||: || ||||:|||| gACTGACCCAAAGTGAAGGACATTGCCg Ubfd1; RGD1306614; rCG_39770 rno-miR-34b 34 54 GUUAGUCGAUUAAUGUGACGGau ||| ||: || |||:|||| CAA--AGTGAAGGACATTGCCgg Ubfd1; RGD1306614; rCG_39770 rno-miR-350 78 102 cAC-UUUCACAUACCC-GAAACAcuu || |:||| | |||| |||||| tTGCAGAGT-TCTGGGACTTTGTtca Ubfd1; RGD1306614; rCG_39770 rno-miR-412 141 166 ugCCGAUCACCU-GG--UCCACUUCA ||: | || | || |||||| || gtGGTGACTGAAGCCAGAGGTGATGT Ubfd1; RGD1306614; rCG_39770 rno-miR-422b 3 24 CGGAAGACUGAGGUUCAGGUCa || |:| || :| :| |||| GCACTTTCACCTCTGGCCCAGg Ubfd1; RGD1306614; rCG_39770 rno-miR-449 31 53 UGG---UCGAUUGUUAUGUGACGGu ||| || |:| |: |||:|||| ACCCAAAG-TGA-AGGACATTGCCg Ubfd1; RGD1306614; rCG_39770 rno-miR-541 56 75 aCACUGGUUGUAGUCUUAGGGAa | |::| |: ||| |||||| aGAGGTC--CG-CAGCATCCCTg

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ubfd1 RAID00043261 rno-miR-106b-5p miRNA MIMAT0000825 Ubfd1 mRNA 293454 Prediction 0.2202 Ubfd1 RAID00318077 rno-miR-452-3p miRNA MIMAT0035749 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID00348444 rno-miR-374-5p miRNA MIMAT0003208 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID00398588 rno-miR-125b-5p miRNA MIMAT0000830 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID00501664 rno-miR-16-5p miRNA MIMAT0000785 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID00729627 rno-miR-29b-3p miRNA MIMAT0000801 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID00780599 rno-miR-376c-3p miRNA MIMAT0003194 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID00816631 rno-miR-15b-5p miRNA MIMAT0000784 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01019563 rno-miR-127-5p miRNA MIMAT0017117 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01025484 rno-miR-214-3p miRNA MIMAT0000885 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01032023 rno-miR-216a-5p miRNA MIMAT0000886 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01083966 rno-miR-3595 miRNA MIMAT0017903 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01135642 rno-miR-381-3p miRNA MIMAT0003199 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01246167 rno-miR-103-3p miRNA MIMAT0000824 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01266548 rno-miR-497-5p miRNA MIMAT0003383 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01283575 rno-miR-181a-5p miRNA MIMAT0000858 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01358718 rno-miR-96-5p miRNA MIMAT0000818 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01568099 rno-miR-181d-5p miRNA MIMAT0005299 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01721497 rno-miR-488-3p miRNA MIMAT0005341 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01741447 rno-miR-351-5p miRNA MIMAT0000608 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01770792 rno-miR-219a-5p miRNA MIMAT0000889 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01926456 rno-miR-433-3p miRNA MIMAT0001628 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID01978857 rno-miR-224-3p miRNA MIMAT0017200 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02039350 rno-miR-365-3p miRNA MIMAT0001549 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02039816 rno-miR-208a-3p miRNA MIMAT0000880 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02153052 rno-miR-20a-5p miRNA MIMAT0000602 Ubfd1 mRNA 293454 Prediction 0.2202 Ubfd1 RAID02340358 rno-miR-107-3p miRNA MIMAT0000826 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02375297 rno-miR-186-5p miRNA MIMAT0000863 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02448802 rno-miR-494-3p miRNA MIMAT0003193 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02575990 rno-miR-93-5p miRNA MIMAT0000817 Ubfd1 mRNA 293454 Prediction 0.2202 Ubfd1 RAID02610969 rno-miR-20b-5p miRNA MIMAT0003211 Ubfd1 mRNA 293454 Prediction 0.2202 Ubfd1 RAID02686898 rno-miR-375-3p miRNA MIMAT0005307 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02761725 rno-miR-377-3p miRNA MIMAT0003123 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02820362 rno-miR-17-5p miRNA MIMAT0000786 Ubfd1 mRNA 293454 Prediction 0.2202 Ubfd1 RAID02921257 rno-miR-150-5p miRNA MIMAT0000853 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02924065 rno-miR-195-5p miRNA MIMAT0000870 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID02988254 rno-miR-291a-3p miRNA MIMAT0000895 Ubfd1 mRNA 293454 Prediction 0.2202 Ubfd1 RAID03005956 rno-miR-135a-5p miRNA MIMAT0000841 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03188533 rno-miR-125a-5p miRNA MIMAT0000829 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03271269 rno-miR-134-5p miRNA MIMAT0000840 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03544607 rno-miR-411-5p miRNA MIMAT0005312 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03560975 rno-miR-291b miRNA MIMAT0017822 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03601070 rno-miR-181b-5p miRNA MIMAT0000859 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03662365 rno-miR-196c-5p miRNA MIMAT0005303 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03754334 rno-miR-499-3p miRNA MIMAT0017227 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03767438 rno-miR-181c-5p miRNA MIMAT0000857 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03837412 rno-miR-495 miRNA MIMAT0005320 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03912473 rno-miR-874-3p miRNA MIMAT0005284 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03935079 rno-miR-320-3p miRNA MIMAT0000903 Ubfd1 mRNA 293454 Prediction 0.1828 Ubfd1 RAID03936869 rno-miR-322-5p miRNA MIMAT0001619 Ubfd1 mRNA 293454 Prediction 0.1828