Gabarapl2
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000547rno-miR-322*64670Gabarapl2acAACG--UCGCG--AAGUACAAa |||| | :|| ||||||| uuUUGCCAACUGCAAAUCAUGUUg219410433[rn4:19:41890313-41890336:+]0.66221447-10.72-0.6672
MIMAT0000557rno-miR-325-5p64670Gabarapl2ugugaaUGACUCGUGGAUGAUCc || || ||||||||| gccuccACACAG-ACCUACUAGu2187899[rn4:19:41889981-41890002:+]0.75661557-16.53-0.6144
MIMAT0004639rno-miR-325-3p64670Gabarapl2aacuauccuccacgaGUUAUUu |||||| aagguaaaugauuaaCAAUAAa28465486[rn4:19:41890368-41890389:+]0.66221206-8.18-0.1079
MIMAT0000568rno-miR-330*64670Gabarapl2agAGACGUCCGGGAC-ACGAA-ACg |:| :: |:||| ||||| || uuUUUCUGAUCUCUGCUGCUUAUGg222694718[rn4:19:41890597-41890621:+]0.52271200-19.10-0.5169
MIMAT0004646rno-miR-338*64670Gabarapl2guGAGUCGUG-GUCCUAUAACaa :|:| : | :| |||||| gaUUUAUUUCUUAAUAUAUUGga321113135[rn4:19:41890016-41890038:+]0.75661230-6.48-0.2998
MIMAT0004646rno-miR-338*64670Gabarapl2guGAG-UCGUGGU-----CCUAU-AACAa ||| ||||||| | ||| |||| cuCUCUAGCACCAUAUAUGCAUAUUUGUu221915943[rn4:19:41890818-41890846:+]0.50831220-17.04-0.8397
MIMAT0000603rno-miR-20a*64670Gabarapl2acauUCACGAGCAU-UACGUCa ||||||| || |||||| agccAGUGCUCUUACAUGCAGa218888909[rn4:19:41890791-41890812:+]0.50831416-19.39-0.5357
MIMAT0000604rno-miR-35064670Gabarapl2caCUUUCACAUACCCG-AAACACUu | :| || || || ||||||| gcGUGACUG-AUCUGCAUUUGUGAg223818841[rn4:19:41890721-41890744:+]0.50831517-14.78-0.1802
MIMAT0004710rno-miR-17-3p64670Gabarapl2ggUGUUCACGGAAGUG-ACGUCa :| |||||: |:|| ||||| caGCCAGUGCUCUUACAUGCAGa221887909[rn4:19:41890790-41890812:+]0.50831360-21.80-0.5392
MIMAT0004713rno-miR-25*64670Gabarapl2cguUAACGGGCACAGAGGCGGa :|| :| || ||||||| gcuGUUCUCAGUUACUCCGCCg2205475[rn4:19:41889957-41889978:+]0.75661557-19.91-0.7256
MIMAT0004715rno-miR-27a*64670Gabarapl2acgaguguucgucgaUUCGGGa |||||| acggcuaaguauuaaAAGCCCc28347368[rn4:19:41890250-41890271:+]0.66221206-14.94-0.1281
MIMAT0004726rno-miR-101a*64670Gabarapl2cguagucguGACA-CUAUUGACu |||| ||||||| uuguguaucCUGUAAAUAACUGg2143254[rn4:19:41889935-41889957:+]0.75661487-15.81-0.5557
MIMAT0004726rno-miR-101a*64670Gabarapl2cgUAGUCGUGACACUAUUGACu | :||::| | :|||||| cuACUAGUGCAUUUGUAACUGg22192113[rn4:19:41889995-41890016:+]0.75661406-14.13-0.2332
MIMAT0004734rno-miR-138*64670Gabarapl2gggacCACAACACUUCAUCGgc || || | |||||| uuucaGUAUUUU--AGUAGCaa318737756[rn4:19:41890640-41890659:+]0.52271260-8.54-0.1602
MIMAT0004739rno-miR-204*64670Gabarapl2uugCAGGG--AAACGGAAGGGUCg ||||: || ||||||| gagGUCCUGGGUUUAAUUCCCAGc22010221045[rn4:19:41890925-41890948:+]0.50831467-23.20-0.1786
MIMAT0000899rno-miR-29764670Gabarapl2guacguauguacguguGUAUGUa |||||| uagauuaguaaauuauCAUACAg28151173[rn4:19:41890054-41890076:+]0.75661206-9.65-0.3216
MIMAT0003113rno-miR-48964670Gabarapl2cgACGGUAUAUACACUACAGUAa || | | | ||||||||| ggUGGC-UCUUCAUGAUGUCAUc22210541075[rn4:19:41890957-41890978:+]0.50831517-14.15-0.1222
MIMAT0004791rno-miR-379*64670Gabarapl2caAUCACCUG-GUAC-AAUGUAUc || || |: : || ||||||| uaUA-UGCAUAUUUGUUUACAUAu221928950[rn4:19:41890831-41890853:+]0.50831447-5.74-0.8079
MIMAT0004791rno-miR-379*64670Gabarapl2caAUCACCUG-GUACAAUGUAUc ||| | || ||| |||||| gaUAGAGCACUCAU-AUACAUAa22111091130[rn4:19:41891012-41891033:+]0.50831296-8.28-0.1611
MIMAT0003202rno-miR-382*64670Gabarapl2uucacaacaggcacUUACUAa |||||| gagacuauaagguaAAUGAUu28457477[rn4:19:41890360-41890380:+]0.66221206-6.41-0.1035
MIMAT0003212rno-miR-20b-3p64670Gabarapl2ggucuUCACGAGUGUG-ACGUCa ||||||| :|| ||||| cagccAGUGCUCUUACAUGCAGa218887909[rn4:19:41890790-41890812:+]0.50831370-24.31-0.5357
MIMAT0003382rno-miR-66464670Gabarapl2auccgaccccUCAUUUACUUau | | |||||| ccggaaucacAUUUAAUGAAga313239260[rn4:19:41890142-41890163:+]0.66221240-4.78-0.1356
MIMAT0005281rno-miR-87164670Gabarapl2acACUGGCCGUGGU-UAGACUUAu | ||:|| ::| ||| ||| ugUAACUGGAUUUAUUUCUUAAUa222105128[rn4:19:41890008-41890031:+]0.75661200-12.92-0.1382
MIMAT0005283rno-miR-872*64670Gabarapl2ucCUCCGAUGACGU---UAU-CAAGu | ||:|| ||:| ||| |||| caGUGGUUAAUGUAGUCAUAGGUUCa221617642[rn4:19:41890520-41890545:+]0.52271230-16.30-0.8480
MIMAT0005287rno-miR-87964670Gabarapl2ccgaaucUCGAUA-UUCGGAGa | | || ||||||| aaugauuAACAAUAAAGCCUCc215471492[rn4:19:41890374-41890395:+]0.66221457-11.56-1.0289
MIMAT0005322rno-miR-532-5p64670Gabarapl2ugUCAGGAUGUG-AGUUCCGUAc || ||| ||: | ||||||| aaAG-CCUCCAUGUAAAGGCAUu221484505[rn4:19:41890387-41890408:+]0.59891577-17.07-0.8243
MIMAT0012827rno-miR-122464670Gabarapl2gagguggaGGGGUCAGGAGUg || ::||||||| cagugugaCCAUGGUCCUCAu214507527[rn4:19:41890410-41890430:+]0.53561497-19.17-0.2202
MIMAT0012827rno-miR-122464670Gabarapl2gagguggAGGGGUCAGGAGUg | | | ||||||| ucuuuugUGCACUGUCCUCAu215191211[rn4:19:41890094-41890114:+]0.70941467-16.38-0.8691
MIMAT0012829rno-miR-51164670Gabarapl2acucacgucucguUUUCCGUa ||||||| aaagccuccauguAAAGGCAu29484504[rn4:19:41890387-41890407:+]0.59891407-10.21-0.7603
MIMAT0012831rno-miR-54464670Gabarapl2cucgaACGA-UUUUUACGUCUUa |||| | |||||||| gccagUGCUCUUACAUGCAGAAc218889911[rn4:19:41890792-41890814:+]0.50831527-13.22-0.3199
MIMAT0012832rno-miR-56864670Gabarapl2cacacaUAUGUAAAUAUGUa :||::|||||||| uaaaacGUAUGUUUAUACAc21511481167[rn4:19:41891051-41891070:+]0.50831587-8.97-0.3971
MIMAT0012845rno-miR-93564670Gabarapl2cgccAUCGCCUUCGCCAUUGACc |||: | | : ||||||| cuacUAGU-GCAUUUGUAACUGg22092113[rn4:19:41889995-41890016:+]0.75661497-16.57-1.1720
MIMAT0012848rno-miR-29464670Gabarapl2ucUAUCCCGGAGGUAAAACUc | || | :|::||||| | auACAGAG-UUUUAUUUUCAg220168187[rn4:19:41890071-41890090:+]0.75661210-6.76-0.1034
MIMAT0001619rno-miR-32264670Gabarapl2agguuuuguacuuaACGACGAc ||||||| cuuuuucugaucucUGCUGCUu29693714[rn4:19:41890596-41890617:+]0.52271407-11.06-0.4768
MIMAT0000579rno-miR-148b-3p64670Gabarapl2uguuucAAGACACUACGUGACu |||| | :||||||| ucaguuUUCUUUUGUGCACUGu217184205[rn4:19:41890087-41890108:+]0.70941607-18.00-0.7846
MIMAT0000784rno-miR-15b64670Gabarapl2acauuugguACU--ACACGACGAu ||| | ||||||| cacuuuuucUGAUCUCUGCUGCUu214691714[rn4:19:41890594-41890617:+]0.52271447-13.45-0.4768
MIMAT0000785rno-miR-1664670Gabarapl2gcGGUUAUAAAUGC-----ACGACGAu ||| | ||| :| ||||||| uaCCACUUUUUCUGAUCUCUGCUGCUu221688714[rn4:19:41890591-41890617:+]0.52271477-14.29-0.4734
MIMAT0000794rno-miR-2464670Gabarapl2gacAAGGACGAC--UUGACU-CGGu ||| || || | |||| ||| cucUUCAUGAUGUCAUCUGAUGCCc22010591083[rn4:19:41890962-41890986:+]0.50831220-12.91-0.2368
MIMAT0000804rno-miR-30c64670Gabarapl2cgacucucacauccuACAAAUGu ||||||| ccauauaugcauauuUGUUUACa29925947[rn4:19:41890828-41890850:+]0.50831407-7.99-1.1903
MIMAT0000805rno-miR-30e64670Gabarapl2gaaggucaguuccuACAAAUGu ||||||| cauauaugcauauuUGUUUACa29926947[rn4:19:41890829-41890850:+]0.50831407-10.12-1.1903
MIMAT0000806rno-miR-30b-5p64670Gabarapl2ucgacucacauccuACAAAUGu ||||||| cauauaugcauauuUGUUUACa29926947[rn4:19:41890829-41890850:+]0.50831407-7.99-1.1903
MIMAT0000807rno-miR-30d64670Gabarapl2gaaggucagccccuACAAAUGu ||||||| cauauaugcauauuUGUUUACa29926947[rn4:19:41890829-41890850:+]0.50831407-8.99-1.1936
MIMAT0000808rno-miR-30a64670Gabarapl2gaaggucagcuccuACAAAUGu ||||||| cauauaugcauauuUGUUUACa29926947[rn4:19:41890829-41890850:+]0.50831407-9.33-1.1936
MIMAT0000846rno-miR-14164670Gabarapl2gguagaAAUGGUCUGUCACAAu |||:|| |||| ||| aguaaaUUAUCAUACAGAGUUu217157178[rn4:19:41890060-41890081:+]0.75661360-12.17-0.1257
MIMAT0000851rno-miR-14564670Gabarapl2ucccuaaggacccuuUUGACCUg ||||||| uacuagugcauuuguAACUGGAu2993115[rn4:19:41889996-41890018:+]0.75661407-12.31-1.2315
MIMAT0000854rno-miR-15264670Gabarapl2gguucAAGACAGUACGUGACu |||| |::||||||| caguuUUCUUUUGUGCACUGu217185205[rn4:19:41890088-41890108:+]0.70941647-16.26-0.7846
MIMAT0000870rno-miR-19564670Gabarapl2cgGUUAUAAAGAC-----ACGACGAu || | |||||| ||||||| acCACUUUUUCUGAUCUCUGCUGCUu220689714[rn4:19:41890592-41890617:+]0.52271547-20.53-0.4734
MIMAT0000872rno-miR-199a-5p64670Gabarapl2cuUGUCCAU-CAGACUUGUGACCc | | ||| ||:| ||||||| uaAAACGUAUGUUUAUACACUGG-22211481170[rn4:19:41891051-41891073:+]0.50831607-17.42-1.0244
MIMAT0000873rno-miR-200c64670Gabarapl2gguaguAAUGGGCCGUCAUAAu |||::: ||||||| augggcUUAUUU-UCAGUAUUu217727747[rn4:19:41890630-41890650:+]0.52271467-9.24-1.0333
MIMAT0000874rno-miR-200a64670Gabarapl2uguagcAAUGGUCUGUCACAAu |||:|| |||| ||| aguaaaUUAUCAUACAGAGUUu217157178[rn4:19:41890060-41890081:+]0.75661360-12.16-0.1257
MIMAT0000875rno-miR-200b64670Gabarapl2caguaguAAUGGUCCGUCAUAAu |||:: ||||||| uaugggcUUAUU-UUCAGUAUUu217726747[rn4:19:41890629-41890650:+]0.52271427-9.16-1.0333
MIMAT0000878rno-miR-20564670Gabarapl2guCUGAGGCCACCUUACUUCCu ||: |: | |||||||| aaGAUACUUCCGAAAUGAAGGg221257278[rn4:19:41890160-41890181:+]0.66221527-20.13-0.4513
MIMAT0000903rno-miR-32064670Gabarapl2agcgggAGAGU-UGGGUCGAAAa |:|:| ::|||:||| acagagUUUUAUUUUCAGUUUUc217170192[rn4:19:41890073-41890095:+]0.75661310-11.99-0.1114
MIMAT0001534rno-miR-44864670Gabarapl2uacccUGUAGGAUGUAUACGUu :|| || |:||||||| cucuaGCA-CC-AUAUAUGCAu218917936[rn4:19:41890820-41890839:+]0.50831497-13.85-0.8182
MIMAT0001538rno-miR-42964670Gabarapl2ugCCGUAAUGGUCUGUCAUAAu ||| |||:: ||||||| ugGGC-UUAUU-UUCAGUAUUu221728747[rn4:19:41890631-41890650:+]0.52271487-15.47-1.0333
MIMAT0003114rno-miR-38364670Gabarapl2ucGGUGUCAGUGGAAGACUAGa |:|| | ::|||||||| uuCUAC-CACUUUUUCUGAUCu221685705[rn4:19:41890588-41890608:+]0.52271507-21.23-0.6249
MIMAT0003176rno-miR-53964670Gabarapl2ugUGUGGUUCCUAUUAAAGAGg ::| | :| | ||||||: uuGUAACUGGAUUUAUUUCUUa221104125[rn4:19:41890007-41890028:+]0.75661320-9.79-0.3872
MIMAT0003200rno-miR-487b64670Gabarapl2ucaccuacugggaCAUGCUaa |||||| agcaaaaguuuaaGUACGAau39752772[rn4:19:41890655-41890675:+]0.50091200-9.81-0.1157
MIMAT0003203rno-miR-48564670Gabarapl2cuuaaguagugccggUCGGAGa |||||| aaugauuaacaauaaAGCCUCc28471492[rn4:19:41890374-41890395:+]0.66221206-11.69-0.1044
MIMAT0003383rno-miR-49764670Gabarapl2auguuuggugucACACGACGAc | ||||||| cuuuuucugaucUCUGCUGCUu211693714[rn4:19:41890596-41890617:+]0.52271427-10.04-0.4802
MIMAT0005300rno-miR-18264670Gabarapl2gccacacucaaGAU-GGUAACGGUUu ||| : ||||||| cacuugcuucaCUAGAUUUUGCCAAc215394419[rn4:19:41890297-41890322:+]0.66221417-9.97-0.9522
MIMAT0005309rno-miR-384-5p64670Gabarapl2ugUA-ACGGAUCCUUAACAAAUGu || ||| | | |||||||| auAUAUGCAU---AUUUGUUUACa222927947[rn4:19:41890830-41890850:+]0.50831487-12.06-1.1953
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G058677Gabarapl2Rattus norvegicus64670
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Gabarapl2RAID00072074rno-miR-200c-3pmiRNAMIMAT0000873Gabarapl2mRNA64670Prediction0.2381
Gabarapl2RAID00355681rno-miR-1188-3pmiRNAMIMAT0017855Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID00456063rno-miR-455-3pmiRNAMIMAT0017308Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID00463616rno-miR-30b-5pmiRNAMIMAT0000806Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID00692832rno-miR-200a-3pmiRNAMIMAT0000874Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID00809731rno-miR-544-5pmiRNAMIMAT0017359Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID00908386rno-miR-200b-3pmiRNAMIMAT0000875Gabarapl2mRNA64670Prediction0.2381
Gabarapl2RAID00958515rno-miR-1224miRNAMIMAT0012827Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01052003rno-miR-30e-5pmiRNAMIMAT0000805Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID01111860rno-miR-24-3pmiRNAMIMAT0000794Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01146227rno-miR-485-5pmiRNAMIMAT0003203Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01184846rno-miR-320-3pmiRNAMIMAT0000903Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01240171rno-miR-141-3pmiRNAMIMAT0000846Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01264241rno-miR-429miRNAMIMAT0001538Gabarapl2mRNA64670Prediction0.2381
Gabarapl2RAID01294475rno-miR-30a-5pmiRNAMIMAT0000808Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID01306628rno-miR-3569miRNAMIMAT0017849Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01317699rno-miR-6216miRNAMIMAT0024856Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01343096rno-miR-487b-3pmiRNAMIMAT0003200Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01349799rno-miR-182miRNAMIMAT0005300Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID01484437rno-miR-539-5pmiRNAMIMAT0003176Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01700673rno-miR-448-3pmiRNAMIMAT0001534Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID01713978rno-miR-935miRNAMIMAT0012845Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01805650rno-miR-199a-5pmiRNAMIMAT0000872Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID01813872rno-miR-15b-5pmiRNAMIMAT0000784Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID01912331rno-miR-30d-5pmiRNAMIMAT0000807Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID01918065rno-miR-195-5pmiRNAMIMAT0000870Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID02218835rno-miR-497-5pmiRNAMIMAT0003383Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID02658773rno-miR-148b-3pmiRNAMIMAT0000579Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID02693651rno-miR-205miRNAMIMAT0000878Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID02805127rno-miR-383-5pmiRNAMIMAT0003114Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID02915396rno-miR-16-5pmiRNAMIMAT0000785Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID03131118rno-miR-384-5pmiRNAMIMAT0005309Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID03199572rno-miR-152-3pmiRNAMIMAT0000854Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID03334781rno-miR-222-5pmiRNAMIMAT0017164Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID03476187rno-miR-145-5pmiRNAMIMAT0000851Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID03492201rno-miR-322-5pmiRNAMIMAT0001619Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID03714297rno-miR-30c-5pmiRNAMIMAT0000804Gabarapl2mRNA64670Prediction0.2202
Gabarapl2RAID03745551rno-miR-148a-3pmiRNAMIMAT0035725Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID03780764rno-miR-322-3pmiRNAMIMAT0000547Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID03882359rno-miR-325-3pmiRNAMIMAT0004639Gabarapl2mRNA64670Prediction0.1828
Gabarapl2RAID04003047rno-miR-16-3pmiRNAMIMAT0017094Gabarapl2mRNA64670Prediction0.1828