DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000547 | rno-miR-322* | 64670 | Gabarapl2 | acAACG--UCGCG--AAGUACAAa | |||| | :|| ||||||| | uuUUGCCAACUGCAAAUCAUGUUg | 2 | 19 | 410 | 433 | [rn4:19:41890313-41890336:+] | 0.6622 | 144 | 7 | -10.72 | -0.6672 |
MIMAT0000557 | rno-miR-325-5p | 64670 | Gabarapl2 | ugugaaUGACUCGUGGAUGAUCc | || || ||||||||| | gccuccACACAG-ACCUACUAGu | 2 | 18 | 78 | 99 | [rn4:19:41889981-41890002:+] | 0.7566 | 155 | 7 | -16.53 | -0.6144 |
MIMAT0004639 | rno-miR-325-3p | 64670 | Gabarapl2 | aacuauccuccacgaGUUAUUu | |||||| | aagguaaaugauuaaCAAUAAa | 2 | 8 | 465 | 486 | [rn4:19:41890368-41890389:+] | 0.6622 | 120 | 6 | -8.18 | -0.1079 |
MIMAT0000568 | rno-miR-330* | 64670 | Gabarapl2 | agAGACGUCCGGGAC-ACGAA-ACg | |:| :: |:||| ||||| || | uuUUUCUGAUCUCUGCUGCUUAUGg | 2 | 22 | 694 | 718 | [rn4:19:41890597-41890621:+] | 0.5227 | 120 | 0 | -19.10 | -0.5169 |
MIMAT0004646 | rno-miR-338* | 64670 | Gabarapl2 | guGAGUCGUG-GUCCUAUAACaa | :|:| : | :| |||||| | gaUUUAUUUCUUAAUAUAUUGga | 3 | 21 | 113 | 135 | [rn4:19:41890016-41890038:+] | 0.7566 | 123 | 0 | -6.48 | -0.2998 |
MIMAT0004646 | rno-miR-338* | 64670 | Gabarapl2 | guGAG-UCGUGGU-----CCUAU-AACAa | ||| ||||||| | ||| |||| | cuCUCUAGCACCAUAUAUGCAUAUUUGUu | 2 | 21 | 915 | 943 | [rn4:19:41890818-41890846:+] | 0.5083 | 122 | 0 | -17.04 | -0.8397 |
MIMAT0000603 | rno-miR-20a* | 64670 | Gabarapl2 | acauUCACGAGCAU-UACGUCa | ||||||| || |||||| | agccAGUGCUCUUACAUGCAGa | 2 | 18 | 888 | 909 | [rn4:19:41890791-41890812:+] | 0.5083 | 141 | 6 | -19.39 | -0.5357 |
MIMAT0000604 | rno-miR-350 | 64670 | Gabarapl2 | caCUUUCACAUACCCG-AAACACUu | | :| || || || ||||||| | gcGUGACUG-AUCUGCAUUUGUGAg | 2 | 23 | 818 | 841 | [rn4:19:41890721-41890744:+] | 0.5083 | 151 | 7 | -14.78 | -0.1802 |
MIMAT0004710 | rno-miR-17-3p | 64670 | Gabarapl2 | ggUGUUCACGGAAGUG-ACGUCa | :| |||||: |:|| ||||| | caGCCAGUGCUCUUACAUGCAGa | 2 | 21 | 887 | 909 | [rn4:19:41890790-41890812:+] | 0.5083 | 136 | 0 | -21.80 | -0.5392 |
MIMAT0004713 | rno-miR-25* | 64670 | Gabarapl2 | cguUAACGGGCACAGAGGCGGa | :|| :| || ||||||| | gcuGUUCUCAGUUACUCCGCCg | 2 | 20 | 54 | 75 | [rn4:19:41889957-41889978:+] | 0.7566 | 155 | 7 | -19.91 | -0.7256 |
MIMAT0004715 | rno-miR-27a* | 64670 | Gabarapl2 | acgaguguucgucgaUUCGGGa | |||||| | acggcuaaguauuaaAAGCCCc | 2 | 8 | 347 | 368 | [rn4:19:41890250-41890271:+] | 0.6622 | 120 | 6 | -14.94 | -0.1281 |
MIMAT0004726 | rno-miR-101a* | 64670 | Gabarapl2 | cguagucguGACA-CUAUUGACu | |||| ||||||| | uuguguaucCUGUAAAUAACUGg | 2 | 14 | 32 | 54 | [rn4:19:41889935-41889957:+] | 0.7566 | 148 | 7 | -15.81 | -0.5557 |
MIMAT0004726 | rno-miR-101a* | 64670 | Gabarapl2 | cgUAGUCGUGACACUAUUGACu | | :||::| | :|||||| | cuACUAGUGCAUUUGUAACUGg | 2 | 21 | 92 | 113 | [rn4:19:41889995-41890016:+] | 0.7566 | 140 | 6 | -14.13 | -0.2332 |
MIMAT0004734 | rno-miR-138* | 64670 | Gabarapl2 | gggacCACAACACUUCAUCGgc | || || | |||||| | uuucaGUAUUUU--AGUAGCaa | 3 | 18 | 737 | 756 | [rn4:19:41890640-41890659:+] | 0.5227 | 126 | 0 | -8.54 | -0.1602 |
MIMAT0004739 | rno-miR-204* | 64670 | Gabarapl2 | uugCAGGG--AAACGGAAGGGUCg | ||||: || ||||||| | gagGUCCUGGGUUUAAUUCCCAGc | 2 | 20 | 1022 | 1045 | [rn4:19:41890925-41890948:+] | 0.5083 | 146 | 7 | -23.20 | -0.1786 |
MIMAT0000899 | rno-miR-297 | 64670 | Gabarapl2 | guacguauguacguguGUAUGUa | |||||| | uagauuaguaaauuauCAUACAg | 2 | 8 | 151 | 173 | [rn4:19:41890054-41890076:+] | 0.7566 | 120 | 6 | -9.65 | -0.3216 |
MIMAT0003113 | rno-miR-489 | 64670 | Gabarapl2 | cgACGGUAUAUACACUACAGUAa | || | | | ||||||||| | ggUGGC-UCUUCAUGAUGUCAUc | 2 | 22 | 1054 | 1075 | [rn4:19:41890957-41890978:+] | 0.5083 | 151 | 7 | -14.15 | -0.1222 |
MIMAT0004791 | rno-miR-379* | 64670 | Gabarapl2 | caAUCACCUG-GUAC-AAUGUAUc | || || |: : || ||||||| | uaUA-UGCAUAUUUGUUUACAUAu | 2 | 21 | 928 | 950 | [rn4:19:41890831-41890853:+] | 0.5083 | 144 | 7 | -5.74 | -0.8079 |
MIMAT0004791 | rno-miR-379* | 64670 | Gabarapl2 | caAUCACCUG-GUACAAUGUAUc | ||| | || ||| |||||| | gaUAGAGCACUCAU-AUACAUAa | 2 | 21 | 1109 | 1130 | [rn4:19:41891012-41891033:+] | 0.5083 | 129 | 6 | -8.28 | -0.1611 |
MIMAT0003202 | rno-miR-382* | 64670 | Gabarapl2 | uucacaacaggcacUUACUAa | |||||| | gagacuauaagguaAAUGAUu | 2 | 8 | 457 | 477 | [rn4:19:41890360-41890380:+] | 0.6622 | 120 | 6 | -6.41 | -0.1035 |
MIMAT0003212 | rno-miR-20b-3p | 64670 | Gabarapl2 | ggucuUCACGAGUGUG-ACGUCa | ||||||| :|| ||||| | cagccAGUGCUCUUACAUGCAGa | 2 | 18 | 887 | 909 | [rn4:19:41890790-41890812:+] | 0.5083 | 137 | 0 | -24.31 | -0.5357 |
MIMAT0003382 | rno-miR-664 | 64670 | Gabarapl2 | auccgaccccUCAUUUACUUau | | | |||||| | ccggaaucacAUUUAAUGAAga | 3 | 13 | 239 | 260 | [rn4:19:41890142-41890163:+] | 0.6622 | 124 | 0 | -4.78 | -0.1356 |
MIMAT0005281 | rno-miR-871 | 64670 | Gabarapl2 | acACUGGCCGUGGU-UAGACUUAu | | ||:|| ::| ||| ||| | ugUAACUGGAUUUAUUUCUUAAUa | 2 | 22 | 105 | 128 | [rn4:19:41890008-41890031:+] | 0.7566 | 120 | 0 | -12.92 | -0.1382 |
MIMAT0005283 | rno-miR-872* | 64670 | Gabarapl2 | ucCUCCGAUGACGU---UAU-CAAGu | | ||:|| ||:| ||| |||| | caGUGGUUAAUGUAGUCAUAGGUUCa | 2 | 21 | 617 | 642 | [rn4:19:41890520-41890545:+] | 0.5227 | 123 | 0 | -16.30 | -0.8480 |
MIMAT0005287 | rno-miR-879 | 64670 | Gabarapl2 | ccgaaucUCGAUA-UUCGGAGa | | | || ||||||| | aaugauuAACAAUAAAGCCUCc | 2 | 15 | 471 | 492 | [rn4:19:41890374-41890395:+] | 0.6622 | 145 | 7 | -11.56 | -1.0289 |
MIMAT0005322 | rno-miR-532-5p | 64670 | Gabarapl2 | ugUCAGGAUGUG-AGUUCCGUAc | || ||| ||: | ||||||| | aaAG-CCUCCAUGUAAAGGCAUu | 2 | 21 | 484 | 505 | [rn4:19:41890387-41890408:+] | 0.5989 | 157 | 7 | -17.07 | -0.8243 |
MIMAT0012827 | rno-miR-1224 | 64670 | Gabarapl2 | gagguggaGGGGUCAGGAGUg | || ::||||||| | cagugugaCCAUGGUCCUCAu | 2 | 14 | 507 | 527 | [rn4:19:41890410-41890430:+] | 0.5356 | 149 | 7 | -19.17 | -0.2202 |
MIMAT0012827 | rno-miR-1224 | 64670 | Gabarapl2 | gagguggAGGGGUCAGGAGUg | | | | ||||||| | ucuuuugUGCACUGUCCUCAu | 2 | 15 | 191 | 211 | [rn4:19:41890094-41890114:+] | 0.7094 | 146 | 7 | -16.38 | -0.8691 |
MIMAT0012829 | rno-miR-511 | 64670 | Gabarapl2 | acucacgucucguUUUCCGUa | ||||||| | aaagccuccauguAAAGGCAu | 2 | 9 | 484 | 504 | [rn4:19:41890387-41890407:+] | 0.5989 | 140 | 7 | -10.21 | -0.7603 |
MIMAT0012831 | rno-miR-544 | 64670 | Gabarapl2 | cucgaACGA-UUUUUACGUCUUa | |||| | |||||||| | gccagUGCUCUUACAUGCAGAAc | 2 | 18 | 889 | 911 | [rn4:19:41890792-41890814:+] | 0.5083 | 152 | 7 | -13.22 | -0.3199 |
MIMAT0012832 | rno-miR-568 | 64670 | Gabarapl2 | cacacaUAUGUAAAUAUGUa | :||::|||||||| | uaaaacGUAUGUUUAUACAc | 2 | 15 | 1148 | 1167 | [rn4:19:41891051-41891070:+] | 0.5083 | 158 | 7 | -8.97 | -0.3971 |
MIMAT0012845 | rno-miR-935 | 64670 | Gabarapl2 | cgccAUCGCCUUCGCCAUUGACc | |||: | | : ||||||| | cuacUAGU-GCAUUUGUAACUGg | 2 | 20 | 92 | 113 | [rn4:19:41889995-41890016:+] | 0.7566 | 149 | 7 | -16.57 | -1.1720 |
MIMAT0012848 | rno-miR-294 | 64670 | Gabarapl2 | ucUAUCCCGGAGGUAAAACUc | | || | :|::||||| | | auACAGAG-UUUUAUUUUCAg | 2 | 20 | 168 | 187 | [rn4:19:41890071-41890090:+] | 0.7566 | 121 | 0 | -6.76 | -0.1034 |
MIMAT0001619 | rno-miR-322 | 64670 | Gabarapl2 | agguuuuguacuuaACGACGAc | ||||||| | cuuuuucugaucucUGCUGCUu | 2 | 9 | 693 | 714 | [rn4:19:41890596-41890617:+] | 0.5227 | 140 | 7 | -11.06 | -0.4768 |
MIMAT0000579 | rno-miR-148b-3p | 64670 | Gabarapl2 | uguuucAAGACACUACGUGACu | |||| | :||||||| | ucaguuUUCUUUUGUGCACUGu | 2 | 17 | 184 | 205 | [rn4:19:41890087-41890108:+] | 0.7094 | 160 | 7 | -18.00 | -0.7846 |
MIMAT0000784 | rno-miR-15b | 64670 | Gabarapl2 | acauuugguACU--ACACGACGAu | ||| | ||||||| | cacuuuuucUGAUCUCUGCUGCUu | 2 | 14 | 691 | 714 | [rn4:19:41890594-41890617:+] | 0.5227 | 144 | 7 | -13.45 | -0.4768 |
MIMAT0000785 | rno-miR-16 | 64670 | Gabarapl2 | gcGGUUAUAAAUGC-----ACGACGAu | ||| | ||| :| ||||||| | uaCCACUUUUUCUGAUCUCUGCUGCUu | 2 | 21 | 688 | 714 | [rn4:19:41890591-41890617:+] | 0.5227 | 147 | 7 | -14.29 | -0.4734 |
MIMAT0000794 | rno-miR-24 | 64670 | Gabarapl2 | gacAAGGACGAC--UUGACU-CGGu | ||| || || | |||| ||| | cucUUCAUGAUGUCAUCUGAUGCCc | 2 | 20 | 1059 | 1083 | [rn4:19:41890962-41890986:+] | 0.5083 | 122 | 0 | -12.91 | -0.2368 |
MIMAT0000804 | rno-miR-30c | 64670 | Gabarapl2 | cgacucucacauccuACAAAUGu | ||||||| | ccauauaugcauauuUGUUUACa | 2 | 9 | 925 | 947 | [rn4:19:41890828-41890850:+] | 0.5083 | 140 | 7 | -7.99 | -1.1903 |
MIMAT0000805 | rno-miR-30e | 64670 | Gabarapl2 | gaaggucaguuccuACAAAUGu | ||||||| | cauauaugcauauuUGUUUACa | 2 | 9 | 926 | 947 | [rn4:19:41890829-41890850:+] | 0.5083 | 140 | 7 | -10.12 | -1.1903 |
MIMAT0000806 | rno-miR-30b-5p | 64670 | Gabarapl2 | ucgacucacauccuACAAAUGu | ||||||| | cauauaugcauauuUGUUUACa | 2 | 9 | 926 | 947 | [rn4:19:41890829-41890850:+] | 0.5083 | 140 | 7 | -7.99 | -1.1903 |
MIMAT0000807 | rno-miR-30d | 64670 | Gabarapl2 | gaaggucagccccuACAAAUGu | ||||||| | cauauaugcauauuUGUUUACa | 2 | 9 | 926 | 947 | [rn4:19:41890829-41890850:+] | 0.5083 | 140 | 7 | -8.99 | -1.1936 |
MIMAT0000808 | rno-miR-30a | 64670 | Gabarapl2 | gaaggucagcuccuACAAAUGu | ||||||| | cauauaugcauauuUGUUUACa | 2 | 9 | 926 | 947 | [rn4:19:41890829-41890850:+] | 0.5083 | 140 | 7 | -9.33 | -1.1936 |
MIMAT0000846 | rno-miR-141 | 64670 | Gabarapl2 | gguagaAAUGGUCUGUCACAAu | |||:|| |||| ||| | aguaaaUUAUCAUACAGAGUUu | 2 | 17 | 157 | 178 | [rn4:19:41890060-41890081:+] | 0.7566 | 136 | 0 | -12.17 | -0.1257 |
MIMAT0000851 | rno-miR-145 | 64670 | Gabarapl2 | ucccuaaggacccuuUUGACCUg | ||||||| | uacuagugcauuuguAACUGGAu | 2 | 9 | 93 | 115 | [rn4:19:41889996-41890018:+] | 0.7566 | 140 | 7 | -12.31 | -1.2315 |
MIMAT0000854 | rno-miR-152 | 64670 | Gabarapl2 | gguucAAGACAGUACGUGACu | |||| |::||||||| | caguuUUCUUUUGUGCACUGu | 2 | 17 | 185 | 205 | [rn4:19:41890088-41890108:+] | 0.7094 | 164 | 7 | -16.26 | -0.7846 |
MIMAT0000870 | rno-miR-195 | 64670 | Gabarapl2 | cgGUUAUAAAGAC-----ACGACGAu | || | |||||| ||||||| | acCACUUUUUCUGAUCUCUGCUGCUu | 2 | 20 | 689 | 714 | [rn4:19:41890592-41890617:+] | 0.5227 | 154 | 7 | -20.53 | -0.4734 |
MIMAT0000872 | rno-miR-199a-5p | 64670 | Gabarapl2 | cuUGUCCAU-CAGACUUGUGACCc | | | ||| ||:| ||||||| | uaAAACGUAUGUUUAUACACUGG- | 2 | 22 | 1148 | 1170 | [rn4:19:41891051-41891073:+] | 0.5083 | 160 | 7 | -17.42 | -1.0244 |
MIMAT0000873 | rno-miR-200c | 64670 | Gabarapl2 | gguaguAAUGGGCCGUCAUAAu | |||::: ||||||| | augggcUUAUUU-UCAGUAUUu | 2 | 17 | 727 | 747 | [rn4:19:41890630-41890650:+] | 0.5227 | 146 | 7 | -9.24 | -1.0333 |
MIMAT0000874 | rno-miR-200a | 64670 | Gabarapl2 | uguagcAAUGGUCUGUCACAAu | |||:|| |||| ||| | aguaaaUUAUCAUACAGAGUUu | 2 | 17 | 157 | 178 | [rn4:19:41890060-41890081:+] | 0.7566 | 136 | 0 | -12.16 | -0.1257 |
MIMAT0000875 | rno-miR-200b | 64670 | Gabarapl2 | caguaguAAUGGUCCGUCAUAAu | |||:: ||||||| | uaugggcUUAUU-UUCAGUAUUu | 2 | 17 | 726 | 747 | [rn4:19:41890629-41890650:+] | 0.5227 | 142 | 7 | -9.16 | -1.0333 |
MIMAT0000878 | rno-miR-205 | 64670 | Gabarapl2 | guCUGAGGCCACCUUACUUCCu | ||: |: | |||||||| | aaGAUACUUCCGAAAUGAAGGg | 2 | 21 | 257 | 278 | [rn4:19:41890160-41890181:+] | 0.6622 | 152 | 7 | -20.13 | -0.4513 |
MIMAT0000903 | rno-miR-320 | 64670 | Gabarapl2 | agcgggAGAGU-UGGGUCGAAAa | |:|:| ::|||:||| | acagagUUUUAUUUUCAGUUUUc | 2 | 17 | 170 | 192 | [rn4:19:41890073-41890095:+] | 0.7566 | 131 | 0 | -11.99 | -0.1114 |
MIMAT0001534 | rno-miR-448 | 64670 | Gabarapl2 | uacccUGUAGGAUGUAUACGUu | :|| || |:||||||| | cucuaGCA-CC-AUAUAUGCAu | 2 | 18 | 917 | 936 | [rn4:19:41890820-41890839:+] | 0.5083 | 149 | 7 | -13.85 | -0.8182 |
MIMAT0001538 | rno-miR-429 | 64670 | Gabarapl2 | ugCCGUAAUGGUCUGUCAUAAu | ||| |||:: ||||||| | ugGGC-UUAUU-UUCAGUAUUu | 2 | 21 | 728 | 747 | [rn4:19:41890631-41890650:+] | 0.5227 | 148 | 7 | -15.47 | -1.0333 |
MIMAT0003114 | rno-miR-383 | 64670 | Gabarapl2 | ucGGUGUCAGUGGAAGACUAGa | |:|| | ::|||||||| | uuCUAC-CACUUUUUCUGAUCu | 2 | 21 | 685 | 705 | [rn4:19:41890588-41890608:+] | 0.5227 | 150 | 7 | -21.23 | -0.6249 |
MIMAT0003176 | rno-miR-539 | 64670 | Gabarapl2 | ugUGUGGUUCCUAUUAAAGAGg | ::| | :| | ||||||: | uuGUAACUGGAUUUAUUUCUUa | 2 | 21 | 104 | 125 | [rn4:19:41890007-41890028:+] | 0.7566 | 132 | 0 | -9.79 | -0.3872 |
MIMAT0003200 | rno-miR-487b | 64670 | Gabarapl2 | ucaccuacugggaCAUGCUaa | |||||| | agcaaaaguuuaaGUACGAau | 3 | 9 | 752 | 772 | [rn4:19:41890655-41890675:+] | 0.5009 | 120 | 0 | -9.81 | -0.1157 |
MIMAT0003203 | rno-miR-485 | 64670 | Gabarapl2 | cuuaaguagugccggUCGGAGa | |||||| | aaugauuaacaauaaAGCCUCc | 2 | 8 | 471 | 492 | [rn4:19:41890374-41890395:+] | 0.6622 | 120 | 6 | -11.69 | -0.1044 |
MIMAT0003383 | rno-miR-497 | 64670 | Gabarapl2 | auguuuggugucACACGACGAc | | ||||||| | cuuuuucugaucUCUGCUGCUu | 2 | 11 | 693 | 714 | [rn4:19:41890596-41890617:+] | 0.5227 | 142 | 7 | -10.04 | -0.4802 |
MIMAT0005300 | rno-miR-182 | 64670 | Gabarapl2 | gccacacucaaGAU-GGUAACGGUUu | ||| : ||||||| | cacuugcuucaCUAGAUUUUGCCAAc | 2 | 15 | 394 | 419 | [rn4:19:41890297-41890322:+] | 0.6622 | 141 | 7 | -9.97 | -0.9522 |
MIMAT0005309 | rno-miR-384-5p | 64670 | Gabarapl2 | ugUA-ACGGAUCCUUAACAAAUGu | || ||| | | |||||||| | auAUAUGCAU---AUUUGUUUACa | 2 | 22 | 927 | 947 | [rn4:19:41890830-41890850:+] | 0.5083 | 148 | 7 | -12.06 | -1.1953 |