DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004719 rno-miR-30c-1* 155151 Coro1a ccUCAUUUGUUGGGA-GAGGGUc || | : ||:|| |||||| ccAGCCAUUUACUCUGCUCCCAc 2 21 26 48 [rn4:1:185852803-185852825:-] 0.5547 124 6 -16.07 -0.2260 MIMAT0005333 rno-miR-742 155151 Coro1a aaauggguuguaccaCCGAAAg |||||| cgaaaauaauaaaacGGCUUUa 2 8 79 100 [rn4:1:185852751-185852772:-] 0.5547 120 6 -9.01 -0.3050 MIMAT0005337 rno-miR-760-3p 155151 Coro1a aggggugUCUG-GGUCUCGGc |||| |||||||| ------aAGACUCCAGAGCCu 2 14 1 15 [rn4:1:185852836-185852850:-] 0.5547 156 7 -21.44 -0.3838 MIMAT0004742 rno-miR-296 155151 Coro1a ccucuCGGAGGU-GGGUUGGGAg ||: ||| ||||||||| acucuGCUCCCACCCCAACCCUc 2 18 36 58 [rn4:1:185852793-185852815:-] 0.5547 164 7 -30.03 -0.1541

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G099232 Coro1a Rattus norvegicus 155151

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Coro1a; Coro1 rno-miR-133a 10 31 UGUCGACCAACUUCCCCUGGUU- ||| |||:|||: -GAGCCUUCAUCU-GGGGCCAGC Coro1a; Coro1 rno-miR-133b 10 31 AUCGACCAACUUCCCCUGGUU- ||| |||:|||: GAGCCUUCAUCU-GGGGCCAGC Coro1a; Coro1 rno-miR-143 2 25 ACUCGAUGUCACG-AAGUAGAGU- || || ||| || ||||||| : AGA-CUCCAGAGCCUUCAUCUGGG Coro1a; Coro1 rno-miR-193 19 34 -GACCCUGAAACAUCCGGUCAA |||||:| |||| UCUGGGGCCA-----GCCAU-- Coro1a; Coro1 rno-miR-22 7 32 UGUCAA-GAAGUUGACC---GUCGAA ||| ||||| |||| |||| CCAGAGCCUUCAUCUGGGGCCAGCC- Coro1a; Coro1 rno-miR-296 9 29 UGUCCUAACUCCC-------CCCCGGGA ||| |||||| -------AGAGCCUUCAUCUGGGGCCA- Coro1a; Coro1 rno-miR-298 21 45 CCUUCUUGUCGGGAG--GAGACGG- ::|: ||||| ||||||: -UGGGGCCAGCCAUUUACUCUGCUC Coro1a; Coro1 rno-miR-324-3p 6 31 -GGUCGUCG----UGGACCCC-GUCACC |||| ||| |:|||||| ||| UCCAG-AGCCUUCAUCUGGGGCCAGC-- Coro1a; Coro1 rno-miR-327 46 63 -UGGGAGUACGGGGAGUUCC |||| || ||||||:| CACCC-CAA--CCCUCAGGC Coro1a; Coro1 rno-miR-328 7 31 UGCCUUCCCGUCUC---------UCCCGGUC- ||||| :||||||| --------CCAGAGCCUUCAUCUGGGGCCAGC Coro1a; Coro1 rno-miR-340 59 82 -CCGAUAUUUCAUUGACUCUGCCU ||| ||| :||:: ||||| AGGCCAUAUGGUGGAUAAGACGA- Coro1a; Coro1 rno-miR-345 11 32 -CGUGACCU-GAUCCCCAGUCGU || || || |||| |||| AGC-CUUCAUCU-GGGGCCAGCC Coro1a; Coro1 rno-miR-34c 26 45 CGUUAGUCGAUUGAUGUGACGGA |||| :||| ||||: ----CCAGCCAUUUACUCUGCUC Coro1a; Coro1 rno-miR-351 7 63 -GUC-CG--AGUU--UCCCG-------------A--------------GGAGUCCCU ||| || ||| :|||| | ||||||| CCAGAGCCUUCAUCUGGGGCCAGCCAUUUACUCUGCUCCCACCCCAACCCUCAGGC- Coro1a; Coro1 rno-miR-370 23 64 -UUGGUCCAA------------GGUGGGGUC----GUCCG ::|||| |||||||| ||||| GGGCCAGCCAUUUACUCUGCUCCCACCCCAACCCUCAGGCC Coro1a; Coro1 rno-miR-422b 11 31 -CGGAAGACUGAGGUUCAGGUCA |||||| ||: | |||| AGCCUUCA---UCUGGGGCCAGC Coro1a; Coro1 rno-miR-449 24 45 -UGGUCGAUUGUUAUGUGACGGU :||||| ||| ||||: GGCCAGCCAUU--UACUCUGCUC Coro1a; Coro1 rno-miR-485 14 33 CUUAAGUAGUGC-CGGUCGGAGA |||||| | ||||||| --CUUCAUCUGGGGCCAGCCA-- Coro1a; Coro1 rno-miR-133a 8 29 ugucgaccaacuucCCCUGGUu |||:||| cagagccttcatctGGGGCCAg Coro1a; Coro1 rno-miR-133b 9 29 aucgaccaacuucCCCUGGUu |||:||| agagccttcatctGGGGCCAg Coro1a; Coro1 rno-miR-143 1 23 acUC-GAUGUCAC-GAAGUAGAgu || || ||| | |||||||| -aAGACTCCAGAGCCTTCATCTgg Coro1a; Coro1 rno-miR-193 8 31 GACCCUGAA----ACAUCCGGUCaa | | | ||| || :|||||| CAGAGCCTTCATCTG-GGGCCAGcc Coro1a; Coro1 rno-miR-22 7 32 uGUC-AAGAAGUUGA--CC-GUCGaa ||| ||||| || || |||| cCAGAGCCTTCATCTGGGGCCAGCca Coro1a; Coro1 rno-miR-296 9 29 UGUCCUAACUCCCCCCCGGga | || || | |||||| AGAGCCTTCATCTGGGGCCag Coro1a; Coro1 rno-miR-298 22 43 CCUUCUUGUCGG--GAGGAGACGg || |: ||||| :| |||||| GG--GGCCAGCCATTTACTCTGCt Coro1a; Coro1 rno-miR-324-3p 7 32 GGUC---GUCGUGGACCCC-GUCacc |||| | ||:|||||| ||| CCAGAGCCTTCATCTGGGGCCAGcca Coro1a; Coro1 rno-miR-327 47 62 UGGGAGUACGGGGAGUUCc |||| || ||||||:| ACCC-CA--ACCCTCAGGc Coro1a; Coro1 rno-miR-328 1 29 ugccuucccGUCUC---------UCCCGGUC ||||| :||||||| --aagactcCAGAGCCTTCATCTGGGGCCAG Coro1a; Coro1 rno-miR-340 60 82 CCGAUAUUUCAUUGACUCUGCcu ||| ||| :||:: | ||||| GGCCATATGGTGGATAAGACGaa Coro1a; Coro1 rno-miR-345 12 31 CGUGACCUGAUCCCCAGUCGu || || |: |||| |||| GC-CTTCATCTGGGGCCAGCc Coro1a; Coro1 rno-miR-34c 22 44 cguuaGUCGAUUGAUGUGACGga |||| | :||| |||| ggggcCAGCCATTTACTCTGCtc Coro1a; Coro1 rno-miR-351 38 63 gucCGAGUUUCCCG--AGGAGUCCcu |||| | | ||||||| tctGCTCCCACCCCAACCCTCAGGcc Coro1a; Coro1 rno-miR-351 1 25 gUCCGAGUUUCCCGAGG-AGUCCCu || ||| |: | ||:| || ||| aAGACTCCAGAGCCTTCATCTGGGg Coro1a; Coro1 rno-miR-370 35 62 uUG-GUCCAAGGUGG----GGUCGUCCG || | | | ||||| || ||||| tACTCTGCTCCCACCCCAACCCTCAGGC Coro1a; Coro1 rno-miR-422b 12 30 CGGAAGACUGAGGUUCAGGUCa |||||| | ||:::| |||| GCCTTC--A-TCTGGGGCCAGc Coro1a; Coro1 rno-miR-449 25 44 uGGUCGAUUGUUAUGUGACGgu ||||| | : ||| |||| gCCAGCCATT--TACTCTGCtc Coro1a; Coro1 rno-miR-485 12 34 cuuAAGUAG-UGCCGGUCGGaga |||||| : |||||||| gccTTCATCTGGGGCCAGCCatt

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Coro1a RAID01145075 rno-miR-296-3p miRNA MIMAT0004742 Coro1a mRNA 155151 Prediction 0.1828 Coro1a RAID01598865 rno-miR-874-5p miRNA MIMAT0017290 Coro1a mRNA 155151 Prediction 0.1828