DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G056872 Cuedc2 Rattus norvegicus 294009

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Cuedc2 rno-let-7c 56 87 UUGGUAUGUUGGAUG----------AUGGAGU ||:| || ||||| |:|||: -CCCGUCCACCCUACCCCUUCUCUAUGCCUUU Cuedc2 rno-miR-127 17 37 UCGGUUCG-AGUCUGCCUAGGCU ||||:|| || || ||||| UGCCAGGCAUC--ACAGAUCCC- Cuedc2 rno-miR-129 17 44 UC-GUUCGG---GUCUGGCGUUUUUC- | ||:|| ||||:| ||:||:| UGCCAGGCAUCACAGAUCCCAGAAGGA Cuedc2 rno-miR-134 4 32 GGGA-GACC--AGUUGGUC---AGUGU- |: |||| || :|||| ||||| ACUGGCUGGACUCUGCCAGGCAUCACAG Cuedc2 rno-miR-141 76 100 -GGUA--GAAAUGGUCUGUCACAAU- |:|| ||||:|: :||||||| UCUAUGCCUUUGCUC--UAGUGUUAA Cuedc2 rno-miR-184 33 65 UGGGAAUA-----GUC-----AAGAGGCAGGU- ||| ||| ||| ||||||| UCCCAGAAGGAUGCAGAAACCUUC-CCGUCCAC Cuedc2 rno-miR-193 4 33 -GAC---CCUGAAACA-UCCG----GUCAA ||| ||||| || |||| ||| ACUGGCUGGACUCUGCCAGGCAUCACAGA- Cuedc2 rno-miR-217 18 50 UAGGUCA-----GUCAAGGA-----CUACGUCAU |||| ||| ||| ||||||| -GCCAGGCAUCACAGAUCCCAGAAGGAUGCAGA- Cuedc2 rno-miR-24 4 23 GACAAGGACGACUUGACUCGGU- |: ||||:||| |||| ----ACUGGCUGGACUCUGCCAG Cuedc2 rno-miR-28 87 121 -GAGUUAUCUGACA-----------CUCGA-GGAA- ||| ||| | ||||| |||| GCUC--UAGUGUUAAUUUAUUCUUGGAGCUUCCUUC Cuedc2 rno-miR-298 37 91 CCUUCU--UGUC---------------GGGA--------- GGAGACGG ||||: :||| |||| |||:|||: AGAAGGAUGCAGAAACCUUCCCGUCCACCCUACCCCUUCUCUAUGCCUUUGCUC Cuedc2 rno-miR-324-5p 22 48 -UGUGGU---UACGGGAUCC-CCUACGC :||:|| || ||| || |||||| GGCAUCACAGAU-CCC-AGAAGGAUGCA Cuedc2 rno-miR-325 1 25 -UGUGAAUGACUCGUG-GAUGAUCC- :|||| :|||: || ||:| ||| GGCACUGGCUGG--ACUCUGCCAGGC Cuedc2 rno-miR-326 3 44 -UGACCU-CCU-------UCCC---------GGGUC-UCC ||||| ||| ||| ||||| ||| CACUGGCUGGACUCUGCCAGGCAUCACAGAUCCCAGAAGGA Cuedc2 rno-miR-331 4 26 AAGAUCCUAUCC-GGGUCC--CCG- ||:| || |:| | ||| -ACUGGCU--GGACUCUGCCAGGCA Cuedc2 rno-miR-346 1 27 UCUCCGU--CCG---UGAGUCCGUCUGU- |||| ||| |||| | |||:|| ---GGCACUGGCUGGACUCUGCCAGGCAU Cuedc2 rno-miR-34a 1 23 UUGUUGGUCGAUUCUGUGACGGU- ::| ||::||| :||| |||||| GGC-ACUGGCU-GGACUCUGCCAG Cuedc2 rno-miR-34c 1 22 -CGUUAGUCGAUUGAUGUGACGGA ||| :|||:: || ||||| GGCACU-GGCUGG--ACUCUGCCA Cuedc2 rno-miR-363-5p 43 68 UUUAACGU-------AGCACUAGGUGGGC |||| || :||||||| ---AUGCAGAAACCUUCCC-GUCCACCCU Cuedc2 rno-miR-370 17 44 UUGGUCCAAGGUG----GGGUCGUCCG :||||| :||| ||||| ||| UGCCAGGCAUCACAGAUCCCAGAAGGA Cuedc2 rno-miR-378 1 25 -UGUGUCCUGGACCU----CAGUCCUC :||| || ||||| | |||| GGCACUGG--CUGGACUCUGCCAGGC- Cuedc2 rno-miR-431 1 27 ACGU-ACUG-CC-G-GACGUUCUGU- ||| ||:| || | |||| ||:|| GGCACUGGCUGGACUCUGCCAGGCAU Cuedc2 rno-miR-449 3 23 -UGGUCGAUUGUUAUGUGACGGU- ||::|||:: || |||||| CACUGGCUGG----ACUCUGCCAG Cuedc2 rno-miR-501 14 46 AAAGUGGGUCC-------CUG----UUUCCUAA || ||||| ||: :|||||| -CUCUGCCAGGCAUCACAGAUCCCAGAAGGAUG Cuedc2 rno-miR-541 17 38 ACACUGGU-UGUAGUC-UUAGGGAA :||| :||||| :||||| ---UGCCAGGCAUCACAGAUCCCA- Cuedc2 rno-miR-542-5p 21 41 GCACUGUACUA-CUAGGGGCUC |:||| |||||| || --AGGCAUCACAGAUCCCAGAA Cuedc2 rno-let-7c 50 73 UUGGUAUGUUGGAU--GAUGGAGu |||| | | ::| | ||||| | AACCTTCCCGTCCACCCTACCCCt Cuedc2 rno-miR-127 17 37 uCGGUUCG-AGUCUGCCUAGGcu ||||:|| ||| | ||||| tGCCAGGCATCACA--GATCCca Cuedc2 rno-miR-129 27 52 ucGU-UCGGGUCU---GGCGUUUUUc || | |||||| :|||:||| caCAGATCCCAGAAGGATGCAGAAAc Cuedc2 rno-miR-134 3 30 GGGA--GACC--AGUUGGUC---AGUGU | || |||| || :|||| ||||| CACTGGCTGGACTCTGCCAGGCATCACA Cuedc2 rno-miR-141 77 98 GGUA--GAAAUGGUCUGUCACAAU |:|| ||||:|: :||||||| CTATGCCTTTGCT--CTAGTGTTA Cuedc2 rno-miR-184 42 63 ugggaauagucaagaGGCAGGU ||||||| gatgcagaaaccttcCCGTCCA Cuedc2 rno-miR-193 5 24 GAC---CCUGAAACAUCCGGUCaa ||| ||||| | ||||| CTGGCTGGACTCT----GCCAGgc Cuedc2 rno-miR-217 17 50 uaGGUC---A--GUCAAGG-----ACUACGUCau |||| | ||| ||| ||||||| tgCCAGGCATCACAGATCCCAGAAGGATGCAGaa Cuedc2 rno-miR-24 1 21 gacaaGGACGACUUGACUCGGU |: ||||:||| |||| -ggcaCTGGCTGGACTCTGCCA Cuedc2 rno-miR-28 95 119 gAGUUAUCUGACA--CUCG-AGGAA |:||| |:| | |||| ||||| gTTAATTTATTCTTGGAGCTTCCTT Cuedc2 rno-miR-298 65 89 ccuucuugucGGGA---GGAGACGg |:|| |||:||| cctaccccttCTCTATGCCTTTGCt Cuedc2 rno-miR-324-5p 26 47 uGUGGUUACGGGAUCCCCUACGc ||| :|| ||| : |||||| tCACAGAT-CCCAGAAGGATGCa Cuedc2 rno-miR-325 2 23 uGUGAAUGACUCGUGGAUGAUCC |||| :|||: | :||:| ||| gCACTGGCTGGAC-TCTGCCAGG Cuedc2 rno-miR-326 15 41 uGAC-CUCC----U-UCCCGGGUCUcc ||| ||| | || |||||| tCTGCCAGGCATCACAGATCCCAGAag Cuedc2 rno-miR-331 3 26 aaGAUCCUAUCCG----GGUCCccg || || |:| | ||||| caCT-GGCTGGACTCTGCCAGGcat Cuedc2 rno-miR-346 4 25 ucuCCGUCCGUGAGUCCGUCUGU ||| || |||| | |||:|| actGGCTGG-ACTCTGCCAGGCA Cuedc2 rno-miR-34c 2 21 CGUUAGUCGAUUGAUGUGACGGa ||| | :|||:: || ||||| GCACT-GGCTGG--ACTCTGCCa Cuedc2 rno-miR-378 2 25 uGUGUCCUGGACCU----CAGUCCuc ||| || ||||| | |||| gCACTGG--CTGGACTCTGCCAGGca Cuedc2 rno-miR-449 1 21 ugGUCGAUUGUUAUGUGACGGU || ||::| : || |||||| ggCA-CTGGCTGGACTCTGCCA Cuedc2 rno-miR-501 21 45 aaaGUGG-GUCCCUG--UUUCCUAa ||:| ||| | :|||||| aggCATCACAGATCCCAGAAGGATg Cuedc2 rno-miR-541 15 38 ACACUGGUUGUAGU-CUUAGGGaa | || | ::||||| :||||| TCTGCCAGGCATCACAGATCCCag Cuedc2 rno-miR-542-5p 19 40 gcaCUGUACU-ACUAGGGGCUc |:||| | |||||| || ccaGGCATCACAGATCCCAGAa Cuedc2 rno-miR-363-5p 60 67 UUUA---------------ACGU-------AGCACUAGGUGGGC |||| || :||||||| AUCACAGAUCCCAGAAGGAUGCAGAAACCUUCCC-GUCCACCCU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Cuedc2 RAID00915966 rno-miR-149-3p miRNA MIMAT0035727 Cuedc2 mRNA 294009 Prediction 0.1828