DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000550 rno-miR-323 65038 Inppl1 ucucCAGCUGGCA-CAUU-ACAc || | |:|| |||| ||| uuuaGUAGCCUGUGGUAAUUGUg 2 18 194 216 [rn4:1:159278400-159278422:-] 0.5585 120 0 -13.22 -0.2342 MIMAT0000554 rno-miR-324-3p 65038 Inppl1 ggucgucguggACCCCGUCACc || ||||||| guuuugaggggUGUGGCAGUGc 2 12 152 173 [rn4:1:159278531-159278552:-] 0.5068 147 7 -16.58 -0.4618 MIMAT0000554 rno-miR-324-3p 65038 Inppl1 ggucgucguggACCCCGUCACc || ||||||| guuuugaggggUGUGGCAGUGc 2 12 64 85 [rn4:1:159278531-159278552:-] 0.5068 147 7 -16.58 -0.4236 MIMAT0000570 rno-miR-331 65038 Inppl1 aagauccUAUCCGGGUCCCCg ||: ||||||| agggcacAUGAAACCAGGGGu 2 15 127 147 [rn4:1:159278557-159278577:-] 0.5068 142 7 -19.90 -0.6762 MIMAT0000570 rno-miR-331 65038 Inppl1 aagauccUAUCCGGGUCCCCg ||: ||||||| agggcacAUGAAACCAGGGGu 2 15 39 59 [rn4:1:159278557-159278577:-] 0.5068 142 7 -19.90 -0.6815 MIMAT0000570 rno-miR-331 65038 Inppl1 aagauccuauccGGGUCCCCg :||||||| ucgggccugaacUCCAGGGGa 2 10 325 345 [rn4:1:159278271-159278291:-] 0.5585 141 7 -19.74 -0.3645 MIMAT0000574 rno-miR-140* 65038 Inppl1 ggCACCAAG--AUGGGACACCAu | ||||: || |||||||| caGGGGUUUAGUAGCCUGUGGUa 2 20 188 210 [rn4:1:159278406-159278428:-] 0.5585 162 7 -23.37 -0.7643 MIMAT0000591 rno-miR-343 65038 Inppl1 agACCCGUGUGCC-UCCCUCu ||||: : || |||||| ugUGGGUUUUGGGAAGGGAGg 2 19 443 463 [rn4:1:159278153-159278173:-] 0.5585 122 6 -24.16 -0.3097 MIMAT0004717 rno-miR-29b-2* 65038 Inppl1 gaUUCGGUGGUACACUUUGGUc |:| || || |||||||| gaAGGGCA-CA--UGAAACCAg 2 21 125 143 [rn4:1:159278561-159278579:-] 0.5068 151 7 -21.00 -0.3200 MIMAT0004717 rno-miR-29b-2* 65038 Inppl1 gaUUCGGUGGUACACUUUGGUc |:| || || |||||||| gaAGGGCA-CA--UGAAACCAg 2 21 37 55 [rn4:1:159278561-159278579:-] 0.5068 151 7 -21.00 -0.2765 MIMAT0004732 rno-miR-135a* 65038 Inppl1 aaAGU-ACCGAAGGU----AGGGAUGu |:| ||| ||| ||||||| auUUAUUGGGGACCAGAGUUCCCUACu 2 21 184 210 [rn4:1:159278494-159278520:-] 0.5327 142 7 -18.19 -0.6866 MIMAT0004732 rno-miR-135a* 65038 Inppl1 aaAGU-ACCGAAGGU----AGGGAUGu |:| ||| ||| ||||||| auUUAUUGGGGACCAGAGUUCCCUACu 2 21 96 122 [rn4:1:159278494-159278520:-] 0.5327 142 7 -18.19 -0.6411 MIMAT0004734 rno-miR-138* 65038 Inppl1 ggGACCACAACACUUCAUCGGc | || ||| | ||||||| guCAGGGGUU-U--AGUAGCCu 2 21 186 204 [rn4:1:159278412-159278430:-] 0.5585 147 7 -17.63 -0.1930 MIMAT0000900 rno-miR-298 65038 Inppl1 ccCUUCUUGUCGGGA-GGA-GACGg |::|| ||| :| ||| |||| uuGGGGACCAGAGUUCCCUACUGCc 2 22 189 213 [rn4:1:159278491-159278515:-] 0.5327 124 0 -27.39 -0.2727 MIMAT0000900 rno-miR-298 65038 Inppl1 ccCUUCUUGUCGGGA-GGA-GACGg |::|| ||| :| ||| |||| uuGGGGACCAGAGUUCCCUACUGCc 2 22 101 125 [rn4:1:159278491-159278515:-] 0.5327 124 0 -27.39 -0.2451 MIMAT0003378 rno-miR-378* 65038 Inppl1 ugugUCC-UGGACCUCA-GUCCUc ||| | ||||:|| ||||| cucgAGGAAGCUGGGGUGCAGGAu 2 19 17 40 [rn4:1:159278664-159278687:-] 0.6936 133 0 -26.13 -0.1623 MIMAT0005332 rno-miR-708* 65038 Inppl1 gaucuucgagUGUCAGAUCAAc :|: ||||||| auuguuugggGCGUUCUAGUUa 2 13 216 237 [rn4:1:159278467-159278488:-] 0.5585 144 7 -10.66 -0.6187 MIMAT0005332 rno-miR-708* 65038 Inppl1 gaucuucgagUGUCAGAUCAAc :|: ||||||| auuguuugggGCGUUCUAGUUa 2 13 128 149 [rn4:1:159278467-159278488:-] 0.5585 144 7 -10.66 -0.5715 MIMAT0012827 rno-miR-1224 65038 Inppl1 gagGUGGAGGGGUCAGGAGUg ||| | |: :||||||| gggCACAU-CUGGGUCCUCAc 2 19 278 297 [rn4:1:159278319-159278338:-] 0.5585 152 7 -24.61 -0.1277 MIMAT0012830 rno-miR-504 65038 Inppl1 cuGUCUCACGUCU-GGUCCCAGa :|| | :||: |||||||| ccUAGCUUUUAGGCCCAGGGUCa 2 21 255 277 [rn4:1:159278427-159278449:-] 0.5585 155 7 -20.65 -0.2436 MIMAT0012830 rno-miR-504 65038 Inppl1 cuGUCUCACGUCU-GGUCCCAGa :|| | :||: |||||||| ccUAGCUUUUAGGCCCAGGGUCa 2 21 167 189 [rn4:1:159278427-159278449:-] 0.5585 155 7 -20.65 -0.1320 MIMAT0000564 rno-miR-328 65038 Inppl1 ugcCUUCCCGUCUCUCCCG-GUc | || || |: ||||| || aaaGCAGAGCUGGAAGGGCACAu 2 20 113 135 [rn4:1:159278569-159278591:-] 0.5581 123 0 -17.79 -0.3533 MIMAT0000564 rno-miR-328 65038 Inppl1 ugcCUUCCCGUCUCUCCCG-GUc | || || |: ||||| || aaaGCAGAGCUGGAAGGGCACAu 2 20 25 47 [rn4:1:159278569-159278591:-] 0.5581 123 0 -17.79 -0.4150 MIMAT0000596 rno-miR-346 65038 Inppl1 ucuCCGUCCGUGA-GUC-CGUCUGu ||::| :||| ||| |||||| cacGGUGGUUACUCCAGUGCAGACa 2 21 220 244 [rn4:1:159278372-159278396:-] 0.5585 135 6 -25.60 -0.1578 MIMAT0000792 rno-miR-23a 65038 Inppl1 ccuUUAGGGACCGUU-ACACUa |: |: |||:|| ||||| aguAGCCUGUGGUAAUUGUGAa 2 19 197 218 [rn4:1:159278398-159278419:-] 0.5585 126 0 -16.50 -0.2815 MIMAT0000793 rno-miR-23b 65038 Inppl1 ccAUUAGGGACCGUU-ACACUa ||: |: |||:|| ||||| agUAGCCUGUGGUAAUUGUGAa 2 20 197 218 [rn4:1:159278398-159278419:-] 0.5585 131 0 -19.51 -0.2815 MIMAT0000800 rno-miR-28 65038 Inppl1 gagUUAUC--UGA-CACUCGAGGAa || || || || ||||||| gggAAGAGUUCCUCGU-AGCUCCUa 2 20 342 365 [rn4:1:159278251-159278274:-] 0.5585 143 7 -14.34 -0.4978 MIMAT0000818 rno-miR-96 65038 Inppl1 ucGUUUUUAC-AC-GAUC-ACGGUUu ||:|:||| | | || |||||| agCAGAGAUGCCGCCGAGCUGCCAAa 2 22 90 115 [rn4:1:159278589-159278614:-] 0.6095 127 6 -24.82 -0.1895 MIMAT0000818 rno-miR-96 65038 Inppl1 ucGUUUUUAC-AC-GAUC-ACGGUUu ||:|:||| | | || |||||| agCAGAGAUGCCGCCGAGCUGCCAAa 2 22 2 27 [rn4:1:159278589-159278614:-] 0.6095 127 6 -24.82 -0.1510 MIMAT0000878 rno-miR-205 65038 Inppl1 gucugAGGCCACCUUACUUCCu |||| | |||||||| guccgUCCG--GAAAUGAAGGa 2 18 384 403 [rn4:1:159278213-159278232:-] 0.5585 154 7 -22.44 -0.5056 MIMAT0003193 rno-miR-494 65038 Inppl1 uccaAAGGGCACAUACAAAGu |||| || ||||||| ucacUUCCACUG-AUGUUUCc 2 18 294 313 [rn4:1:159278303-159278322:-] 0.5585 155 7 -12.16 -0.1126 MIMAT0005316 rno-miR-455 65038 Inppl1 gcuacaucaggUUUCCGUGUAu ||:||||||| agcagagcuggAAGGGCACAUg 2 12 115 136 [rn4:1:159278568-159278589:-] 0.5068 151 7 -16.63 -0.1555 MIMAT0005316 rno-miR-455 65038 Inppl1 gcuacaucaggUUUCCGUGUAu ||:||||||| agcagagcuggAAGGGCACAUg 2 12 27 48 [rn4:1:159278568-159278589:-] 0.5068 151 7 -16.63 -0.1735 MIMAT0005316 rno-miR-455 65038 Inppl1 gcUACAUCAGGUU--UCCGUGUAu :|| :|| ::: :||||||| gcGUGGGGUAUGGUUGGGCACAUc 2 21 263 286 [rn4:1:159278330-159278353:-] 0.5585 147 7 -17.24 -0.2078 MIMAT0005331 rno-miR-708 65038 Inppl1 gggUCGAUCUAACAUUCGAGGAa ||:| | || ||||||| aagAGUU-CCUCGU-AGCUCCUa 2 21 345 365 [rn4:1:159278251-159278271:-] 0.5585 144 7 -13.23 -0.4910

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G055626 Inppl1 Rattus norvegicus 65038

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Inppl1 RAID00198392 rno-miR-346 miRNA MIMAT0000596 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID00296384 rno-miR-331-3p miRNA MIMAT0000570 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID00309562 rno-miR-205 miRNA MIMAT0000878 Inppl1 mRNA 65038 Prediction 0.2202 Inppl1 RAID00420885 rno-miR-184 miRNA MIMAT0000861 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID00445297 rno-miR-92a-2-5p miRNA MIMAT0017108 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID00519010 rno-miR-328a-3p miRNA MIMAT0000564 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID01006151 rno-miR-23b-3p miRNA MIMAT0000793 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID01028897 rno-miR-325-3p miRNA MIMAT0004639 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID02292575 rno-miR-28-5p miRNA MIMAT0000800 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID02296678 rno-miR-96-5p miRNA MIMAT0000818 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID02600300 rno-miR-770-3p miRNA MIMAT0017317 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID02735801 rno-miR-23a-3p miRNA MIMAT0000792 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID02759099 rno-miR-3541 miRNA MIMAT0017795 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID03431977 rno-miR-494-3p miRNA MIMAT0003193 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID03517800 rno-miR-708-5p miRNA MIMAT0005331 Inppl1 mRNA 65038 Prediction 0.1828 Inppl1 RAID03778068 rno-miR-455-5p miRNA MIMAT0005316 Inppl1 mRNA 65038 Prediction 0.1828