DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000547 rno-miR-322* 313782 Fbxl12 acaACGUCGCGAAGUACAAa ||| : :|||||||| uccUGC-CUUUUUCAUGUUu 2 18 547 565 [rn4:8:19656986-19657004:-] 0.6539 147 7 -11.77 -1.2109 MIMAT0000598 rno-miR-347 313782 Fbxl12 acccgcuggguCUCCCUGu ||||||| uguaaauuaauGAGGGACu 2 9 69 87 [rn4:8:19657464-19657482:-] 0.6482 140 7 -15.87 -1.1272 MIMAT0000599 rno-miR-349 313782 Fbxl12 ucUCCAAUUCUGUC--GUCCCGAc :||| |||: :| ||||||| gaGGGUGAAGGGGGUUCAGGGCUc 2 21 403 426 [rn4:8:19657125-19657148:-] 0.5176 159 7 -24.60 -0.4091 MIMAT0000783 rno-miR-10b 313782 Fbxl12 uguGUUUAAGCCAAGAUGUCcc || :|| |||||||| uuuCAUGUU---UUCUACAGca 3 20 556 574 [rn4:8:19656977-19656995:-] 0.6539 131 0 -9.62 -0.5107 MIMAT0000813 rno-miR-34b 313782 Fbxl12 guuaguCGAUUAAUGUGACGGAu |:| ||: |||||| uacuguGUUUUAUAUCCUGCCUu 2 18 533 555 [rn4:8:19656996-19657018:-] 0.6539 121 6 -13.63 -0.3703 MIMAT0003116 rno-miR-501 313782 Fbxl12 aaAGUG--GGUCCCUGUUUCCUAa |:|| ::| || ||||||| uuUUACUAUUAAAGAAAAAGGAUg 2 21 582 605 [rn4:8:19656946-19656969:-] 0.6539 151 7 -11.66 -1.2767 MIMAT0003162 rno-miR-1* 313782 Fbxl12 ccCAUGUAUUUCUUCAU-ACACg ||| | ||| |||| |||| ugGUAGA-CAAGCAGUAUUGUGc 2 21 299 320 [rn4:8:19657231-19657252:-] 0.5008 126 0 -16.81 -0.1200 MIMAT0003195 rno-miR-376b-5p 313782 Fbxl12 auugguaucuuccuUAUAGGug |||||| auuuacuguguuuuAUAUCCug 3 9 530 551 [rn4:8:19657000-19657021:-] 0.6539 120 0 -7.84 -0.1023 MIMAT0005278 rno-miR-466b 313782 Fbxl12 guACCUGUAUGUGU---GUGUGUAu |||| | :| || ||||||| ucUGGA-AGGCCCAGUUCACACAUu 2 21 178 201 [rn4:8:19657350-19657373:-] 0.6482 149 7 -15.51 -0.8972 MIMAT0005281 rno-miR-871 313782 Fbxl12 acACU-GGCCGUGGUUAGAC-UUAu ||| |:|| ::: ||||| ||| ccUGAGCUGGGGUU-AUCUGUAAUc 2 22 125 148 [rn4:8:19657403-19657426:-] 0.6482 122 0 -14.55 -0.4945 MIMAT0005315 rno-miR-434 313782 Fbxl12 ucCUCAGCUCACUACCA-AGUUu ||| || ||| ||| |||| auGAG-GGACUGA-GGUCUCAAg 2 21 78 98 [rn4:8:19657453-19657473:-] 0.6482 120 0 -14.70 -0.3306 MIMAT0005332 rno-miR-708* 313782 Fbxl12 gaUCUUCGA-GUGUCA-GAUCAAc :| :||| || || |||||| caGGUGGCUGGACUGUCCUAGUUu 2 21 486 509 [rn4:8:19657042-19657065:-] 0.5889 123 6 -13.50 -0.6807 MIMAT0012828 rno-miR-362 313782 Fbxl12 uaaguguggauccaaggUUCCUAa |||||| uuuuacuauuaaagaaaAAGGAUg 2 8 582 605 [rn4:8:19656946-19656969:-] 0.6539 120 6 -8.97 -0.5102 MIMAT0012840 rno-miR-802 313782 Fbxl12 uuccuACUUAGAAACAAUGACu | |||| | |||||| gguucUCAAUCAUAUUUACUGu 2 18 517 538 [rn4:8:19657013-19657034:-] 0.6539 129 6 -8.15 -0.1871 MIMAT0012846 rno-miR-201 313782 Fbxl12 uucUUGUUACGGAAUGACUCa ||: || :|||||| | cucAAUCAU-AUUUACUGUGu 2 19 521 540 [rn4:8:19657011-19657030:-] 0.6539 120 0 -11.59 -0.1145 MIMAT0000562 rno-let-7d 313782 Fbxl12 uugAUACGUUGGAU-GAUGGAGa || ||| | || ||||||| gaaUAGGCAUCAUAGCUACCUCa 2 20 205 227 [rn4:8:19657324-19657346:-] 0.6482 162 7 -15.31 -1.0737 MIMAT0000615 rno-miR-101b 313782 Fbxl12 aagucGAUAGUGU-CAUGACAu | ||||:| |||||| guucuCAAUCAUAUUUACUGUg 2 17 518 539 [rn4:8:19657012-19657033:-] 0.6539 127 6 -13.65 -0.3211 MIMAT0000774 rno-let-7a 313782 Fbxl12 uugAUAUGUUGGAU-GAUGGAGu || :|| | || ||||||| gaaUAGGCAUCAUAGCUACCUCa 2 20 205 227 [rn4:8:19657324-19657346:-] 0.6482 158 7 -15.57 -1.0787 MIMAT0000775 rno-let-7b 313782 Fbxl12 uugGUGUGUUGGAU-GAUGGAGu :| :|| | || ||||||| gaaUAGGCAUCAUAGCUACCUCa 2 20 205 227 [rn4:8:19657324-19657346:-] 0.6482 154 7 -18.37 -1.0787 MIMAT0000776 rno-let-7c 313782 Fbxl12 uugGUAUGUUGGAU-GAUGGAGu :| :|| | || ||||||| gaaUAGGCAUCAUAGCUACCUCa 2 20 205 227 [rn4:8:19657324-19657346:-] 0.6482 154 7 -17.61 -1.0787 MIMAT0000777 rno-let-7e 313782 Fbxl12 uugAUAUGUUGGA-GGAUGGAGu || :|| | | ||||||| gaaUAGGCAUCAUAGCUACCUCa 2 20 205 227 [rn4:8:19657324-19657346:-] 0.6482 150 7 -15.70 -1.0787 MIMAT0000778 rno-let-7f 313782 Fbxl12 uugaUAUGU-UAG-AU-GAUGGAGu ||| : ||| || ||||||| aggaAUAGGCAUCAUAGCUACCUCa 2 19 203 227 [rn4:8:19657324-19657348:-] 0.6482 151 7 -15.50 -1.0787 MIMAT0000779 rno-let-7i 313782 Fbxl12 uugUCGUGUUUGAUGAUGGAGu :|||: |: :||||||| auaGGCAU-CAUAGCUACCUCa 2 20 207 227 [rn4:8:19657324-19657344:-] 0.6482 149 7 -18.75 -1.0787 MIMAT0000794 rno-miR-24 313782 Fbxl12 gaCA-AGGACGACUUGACUCGGu || |: ||||| ||||||| caGUAUUGUGCUG--CUGAGCCa 2 21 310 330 [rn4:8:19657221-19657241:-] 0.5008 156 7 -23.23 -0.2095 MIMAT0000798 rno-miR-27b 313782 Fbxl12 cgucUUGAAUCGGUGACACuu | | || ::|||||| cucaAUCAUAUUUACUGUGuu 3 18 521 541 [rn4:8:19657010-19657030:-] 0.6539 133 0 -11.00 -0.2667 MIMAT0000799 rno-miR-27a 313782 Fbxl12 cgccUUGAAUCGGUGACACuu | | || ::|||||| cucaAUCAUAUUUACUGUGuu 3 18 521 541 [rn4:8:19657010-19657030:-] 0.6539 133 0 -10.56 -0.2667 MIMAT0000800 rno-miR-28 313782 Fbxl12 gagUUAUCUG-ACACUCGA-GGAa |||||:| | |||| ||| aggAAUAGGCAUCAUAGCUACCUc 2 20 203 226 [rn4:8:19657325-19657348:-] 0.6482 122 0 -14.37 -1.0641 MIMAT0000810 rno-miR-31 313782 Fbxl12 gucGAUAC-GGUCGUAGAACGGa ||:|| :: :||| |||| uuaCUGUGUUUUAUAUCCUGCCu 2 20 532 554 [rn4:8:19656997-19657019:-] 0.6539 122 0 -19.38 -0.1089 MIMAT0000819 rno-miR-98 313782 Fbxl12 uugUUAU--GUUGAAU-GAUGGAGu |||| || | || ||||||| aggAAUAGGCAUCAUAGCUACCUCa 2 20 203 227 [rn4:8:19657324-19657348:-] 0.6482 157 7 -16.98 -1.0787 MIMAT0000823 rno-miR-101a 313782 Fbxl12 aagucaaUAGUGU-CAUGACAu ||||:| |||||| guucucaAUCAUAUUUACUGUg 2 15 518 539 [rn4:8:19657012-19657033:-] 0.6539 125 6 -13.65 -0.3238 MIMAT0000828 rno-miR-124 313782 Fbxl12 ccguAAGUGGCGCACGGAAu ||:|: | |||||| guguUUUAUAUCCUGCCUUu 2 17 537 556 [rn4:8:19656995-19657014:-] 0.6539 124 6 -11.37 -0.2223 MIMAT0000834 rno-miR-128 313782 Fbxl12 uuucucuggccAAGUGACACu ||:|||||| ucucaaucauaUUUACUGUGu 2 11 520 540 [rn4:8:19657011-19657031:-] 0.6539 134 6 -12.34 -0.3259 MIMAT0000840 rno-miR-134 313782 Fbxl12 ggggAGACCAGUU-GGUC-AGUGu ||||| :: |||| |||| agagUCUGGAAGGCCCAGUUCACa 2 19 174 197 [rn4:8:19657354-19657377:-] 0.6482 121 0 -21.25 -0.8117 MIMAT0000843 rno-miR-137 313782 Fbxl12 gauGCGCAUAAGAAUUCGU-UAUu | :|| |||| |||| ||| uuuCAUGUUUUCUACAGCAUAUAc 2 21 556 579 [rn4:8:19656972-19656995:-] 0.6539 128 0 -8.95 -1.2564 MIMAT0000850 rno-miR-144 313782 Fbxl12 ucaugUAGUAGAUAUGACAu ||||| | |||||| ucucaAUCAUAUUUACUGUg 2 16 520 539 [rn4:8:19657012-19657031:-] 0.6539 135 6 -13.85 -0.3211 MIMAT0000852 rno-miR-146a 313782 Fbxl12 uuggguaccuuaagUCAAGAGu :|||||| cuaguuuucuaaaaGGUUCUCa 2 9 503 524 [rn4:8:19657027-19657048:-] 0.5889 124 6 -10.67 -0.3037 MIMAT0000873 rno-miR-200c 313782 Fbxl12 ggUAGUAAUGGGCCGUCAUAAu || :| : | |||||||| guAUGGUAGACAAGCAGUAUUg 2 21 296 317 [rn4:8:19657234-19657255:-] 0.5008 152 7 -15.07 -0.2419 MIMAT0000875 rno-miR-200b 313782 Fbxl12 caGUAGUAAUGGUCCGUCAUAAu :|| :| : || |||||||| ggUAUGGUAGACAAGCAGUAUUg 2 22 295 317 [rn4:8:19657234-19657256:-] 0.5008 161 7 -15.14 -0.2419 MIMAT0000876 rno-miR-203 313782 Fbxl12 gaucaccaggauuuGUAAAGUg ||||||| cccuuauagaggguCAUUUCAg 2 9 369 390 [rn4:8:19657161-19657182:-] 0.5092 140 7 -12.07 -0.2228 MIMAT0001082 rno-miR-196b 313782 Fbxl12 gggUUGU-UGUCCU-UUGAUGGAu ||:| :|| | |:|||||| aggAAUAGGCAUCAUAGCUACCUc 2 20 203 226 [rn4:8:19657325-19657348:-] 0.6482 137 6 -16.65 -0.1001 MIMAT0001538 rno-miR-429 313782 Fbxl12 ugCCGUA--AU-GGUCUGUCAUAAu ||:|| || || :||||||| uaGGUAUGGUAGACAAGCAGUAUUg 2 21 293 317 [rn4:8:19657234-19657258:-] 0.5008 154 7 -19.20 -0.2419 MIMAT0003119 rno-miR-224 313782 Fbxl12 auuugccuUGGUGAUCACUGAAc |::: |||||||| auccuaacAUUGAAAGUGACUUu 2 16 29 51 [rn4:8:19657500-19657522:-] 0.6482 147 7 -12.42 -0.9541 MIMAT0003193 rno-miR-494 313782 Fbxl12 uccaAAGGGCACA-UACAAAGu | ||: | | ||||||: auccUGCCUUUUUCAUGUUUUc 2 18 546 567 [rn4:8:19656984-19657005:-] 0.6539 132 0 -8.92 -0.1169 MIMAT0005303 rno-miR-196c 313782 Fbxl12 gggUUGU-UGUGCU-UUGAUGGAu ||:| :||: | |:|||||| aggAAUAGGCAUCAUAGCUACCUc 2 20 203 226 [rn4:8:19657325-19657348:-] 0.6482 141 6 -13.86 -0.1001 MIMAT0005309 rno-miR-384-5p 313782 Fbxl12 uguaAC-GGAUCCUUAACA-AAUGu || ||| || |||| |||| ugggUGACCUCAGACUUGUCUUACa 2 20 149 173 [rn4:8:19657378-19657402:-] 0.6482 126 0 -12.84 -0.8170

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G116503 Fbxl12 Rattus norvegicus 313782

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Fbxl12 RAID00109297 rno-let-7i-5p miRNA MIMAT0000779 Fbxl12 mRNA 313782 Prediction 0.2381 Fbxl12 RAID00351530 rno-miR-31a-5p miRNA MIMAT0000810 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID00652449 rno-let-7c-5p miRNA MIMAT0000776 Fbxl12 mRNA 313782 Prediction 0.2381 Fbxl12 RAID00743840 rno-miR-137-3p miRNA MIMAT0000843 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID00771264 rno-miR-203a-3p miRNA MIMAT0000876 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID00864514 rno-miR-200b-3p miRNA MIMAT0000875 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID00903679 rno-miR-322-3p miRNA MIMAT0000547 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID00925793 rno-miR-124-3p miRNA MIMAT0000828 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID00944408 rno-miR-24-3p miRNA MIMAT0000794 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID01526949 rno-miR-200c-3p miRNA MIMAT0000873 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID01530462 rno-miR-494-3p miRNA MIMAT0003193 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID01567907 rno-miR-196b-5p miRNA MIMAT0001082 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID01573957 rno-miR-134-5p miRNA MIMAT0000840 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID01700420 rno-let-7b-5p miRNA MIMAT0000775 Fbxl12 mRNA 313782 Prediction 0.2381 Fbxl12 RAID01717954 rno-miR-101a-3p miRNA MIMAT0000823 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID01773742 rno-miR-27a-3p miRNA MIMAT0000799 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID01844593 rno-miR-27b-3p miRNA MIMAT0000798 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID01845385 rno-miR-98-5p miRNA MIMAT0000819 Fbxl12 mRNA 313782 Prediction 0.2381 Fbxl12 RAID01868379 rno-let-7d-5p miRNA MIMAT0000562 Fbxl12 mRNA 313782 Prediction 0.2202 Fbxl12 RAID01910460 rno-miR-347 miRNA MIMAT0000598 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID02108917 rno-let-7f-5p miRNA MIMAT0000778 Fbxl12 mRNA 313782 Prediction 0.2381 Fbxl12 RAID02656116 rno-miR-196c-5p miRNA MIMAT0005303 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID02752123 rno-let-7a-5p miRNA MIMAT0000774 Fbxl12 mRNA 313782 Prediction 0.2381 Fbxl12 RAID03023063 rno-miR-429 miRNA MIMAT0001538 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID03089683 rno-miR-28-5p miRNA MIMAT0000800 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID03118912 rno-miR-146a-5p miRNA MIMAT0000852 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID03164899 rno-miR-384-5p miRNA MIMAT0005309 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID03205537 rno-let-7e-5p miRNA MIMAT0000777 Fbxl12 mRNA 313782 Prediction 0.2381 Fbxl12 RAID03577295 rno-miR-101b-3p miRNA MIMAT0000615 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID03594764 rno-miR-770-3p miRNA MIMAT0017317 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID03625238 rno-let-7g-5p miRNA MIMAT0035719 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID03796321 rno-miR-144-3p miRNA MIMAT0000850 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID03809526 rno-miR-224-5p miRNA MIMAT0003119 Fbxl12 mRNA 313782 Prediction 0.1828 Fbxl12 RAID03883347 rno-miR-128-3p miRNA MIMAT0000834 Fbxl12 mRNA 313782 Prediction 0.1828