DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-134 50 72 -GGGAGACCAGUUGGUCAGUGU- ||||||| :||||| :|| CCCCUCUGAAU-GCCAGUGGCAC Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-18 53 76 AUAGACG--UGAUCUACGUGGAAU |||| :| || ||||||| -CUCUGAAUGCCAGUGGCACCUUU Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-181b 33 63 -GGGUGGC-----UGUCGUU---ACUUACAA ||||:| ||||| |||||| CCCCAUCCCUGACACAGCCCCUCUGAAUGC- Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-184 16 39 -UGGGAAUAGUCAAGAGGCA--GGU- ||||| ||| :|||| ||| GACCCU-AUCCC--UUCCGGCCCCAU Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-189 54 73 UGACUAUAGUCGAGUCAUCCGUG- |||| || |||| ||||| UCUGAAU---GC-CAGU-GGCACC Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-216 44 88 -GUGUCA---------ACGGUCG-------------ACUCUAAU ||||| ||||||: ||||||| ACACAGCCCCUCUGAAUGCCAGUGGCACCUUUCCUCUGAGAUUU Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-217 27 69 UAGGUCAGUCAA-GGACU---------------AC-GUCAU |||:| | ||||| || ||||: UUCCGGCCCCAUCCCUGACACAGCCCCUCUGAAUGCCAGUGG Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-292-3p 45 73 -UGU----GAGUUU--UGGACCGCCGUGAA ||| ||| :|| |:||||| CACAGCCCCUCUGAAUGCCA-GUGGCACC- Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-298 42 65 CCUUCU-UGUCGGG-AGGAG-ACGG- || ||||||| ||: |||| ---UGACACAGCCCCUCUGAAUGCCA Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-320 48 68 AAGCGGGAGAG---UUGGGUCGAAAA |||| ||| | ||||: --AGCCC-CUCUGAAUGCCAGUG--- Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-324-3p 61 75 -GGUCGUCGUGGACCCCGUCACC ||||::|||||| GCCAGUGGCACCUU--------- Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-34a 25 53 UUGUUGGUCGAUU------CUGUGACGGU | ||:|| ||||| ||| -CCUUCCGGCCCCAUCCCUGACACAGCCC Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-383 60 84 UCGGUGUCAGUGGA----AGACUAGA |||| | ||||| ||||| UGCCAGUGGCACCUUUCCUCUGAG-- Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-449 28 53 UGGUCGAUUGUUA----UGUGACGGU ||:|| || |||| ||| UCCGGCCC-CAUCCCUGACACAGCCC Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-541 3 30 ACACUGGUUGUAGUCU----UAGGGAA- |||: :|||| || ||||||| -CUGAUGGACAUGUGACCCUAUCCCUUC Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-7* 64 91 AUACCGUCU------GACACUAAACAAC :||||| ||| ||||||| AGUGGCACCUUUCCUCUGAGAUUUGUG- Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-93 39 73 GAUGGAC-GUG---------CUUG------UCGUGAAAC |||| ||| |||: :|||| --CCCUGACACAGCCCCUCUGAAUGCCAGUGGCACC--- Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-134 51 72 GGGAGACCAGUUGGUCA--GUGu ||||||| : :||||| ||| CCCTCTGAAT-GCCAGTGGCACc Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-18 52 75 auAGACGU--GAUCUACGUGGAAu |||| | | || ||||||| ccTCTGAATGCCAGTGGCACCTTt Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-181b 34 63 GGGU---GGC--UGUC---GUUACUUACaa |||| |:| |||| | |||||| CCCATCCCTGACACAGCCCCTCTGAATGcc Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-184 17 35 UGGGAAUAGUCAAGAGGCAGGu |||| |||| | |||| || ACCC-TATCCCT--TCCGGCCc Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-216 61 87 guGUCAACG------GUCGACUCUAAu |||| || | |||||||| gcCAGTGGCACCTTTCCTCTGAGATTt Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-217 37 67 UAGG---UCAGUCAAG--GAC-UAC-GUCAu |||| | ||| | ||| ||| |||| ATCCCTGACACAGCCCCTCTGAATGCCAGTg Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-25 74 95 agucuGGCUCUGUUCACGUUAc |:||||: ||||| | ttcctCTGAGATTTGTGCATTa Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-292-3p 50 73 uGUGAGUUUUG-GACCGCCGUGaa | ||| :||: | |:||||| cCCCTCTGAATGCCAGTGGCACct Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-298 39 59 ccuuCU-UGUCGGGAGGAGACgg || |||||| |||||| ccctGACACAGCC--CCTCTGaa Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-298 61 83 ccuUC-UUGUCGGGAGGAGACgg || ::|| |::||||||| gccAGTGGCACCTTTCCTCTGag Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-320 47 76 aagcGGGAGAGUU--GG-----GUCGAAAa |||||| || || || |||| cagcCCCTCTGAATGCCAGTGGCACCTTTc Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-324-3p 40 68 GGUC---GUCGUG--GAC--CCCGUCACC || | |||| | ||| | |||||| CCTGACACAGCCCCTCTGAATGCCAGTGG Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-34a 30 52 uuguuGGUCGAUUCUGUGACGGu ||| | ||||| ||| cggccCCATCCCTGACACAGCCc Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-383 60 85 uCGGUGUCAGUGGA----AGACUaga |||| | ||||| ||||| tGCCAGTGGCACCTTTCCTCTGAgat Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-383 42 61 uCGGUGUCAGUGGAAGACUaga | ||||| | || ||||| tGACACAG-C-CCCTCTGAatg Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-541 13 28 ACACUGGUUGUAGUCUUAGGGAA ||||||| | | ||||||| TGTGACC--C-T----ATCCCTT Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-7* 64 91 auACCGU------CUGACACUAAACAac ||||| ||| ||||||| agTGGCACCTTTCCTCTGAGATTTGTgc Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-93 51 75 gaugGACGUGC--UUGUCGUGAAAc ||| |:| |:::|||| || ccctCTGAATGCCAGTGGCACCTTt Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-18 68 75 AU-------------------AGACG--UGAUCUACGUGGAAU |||| :| || ||||||| CCCCAUCCCUGACACAGCCCCUCUGAAUGCCAGUGGCACCUUU Tbcb; LOC103690005; LOC100911774; ZH14; rCG_53953 rno-miR-216 80 87 GUGUCA---------ACGGUC-------------GACUCUAAU ||||| |||||| |||||||| CACAGCCCCUCUGAAUGCCAGUGGCACCUUUCCUCUGAGAUUU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Tbcb RAID01541833 rno-miR-3573-5p miRNA MIMAT0017856 Tbcb mRNA 292777 Prediction 0.1828 Tbcb RAID03706056 rno-miR-423-5p miRNA MIMAT0017305 Tbcb mRNA 292777 Prediction 0.1828