DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000568 rno-miR-330* 303567 Tmub2 agagacGUCC-GGGACACGAAAcg :||| : :| |||||| caggaaUAGGAUAUUUUGCUUUcu 3 18 497 520 [rn4:10:91368619-91368642:+] 0.6314 128 0 -11.92 -0.1079 MIMAT0000577 rno-miR-337 303567 Tmub2 uuuccGUAGUAUAU-CCUC-GACUu | || |||| |||| |||| gcauaCCUC-UAUAGGGAGUCUGAa 2 19 358 381 [rn4:10:91368480-91368503:+] 0.6314 123 0 -16.51 -0.4153 MIMAT0000604 rno-miR-350 303567 Tmub2 cacuuucacauacccGAAACACUu :||||||: augaauaaaauuccaUUUUGUGGc 2 10 732 755 [rn4:10:91368854-91368877:+] 0.6314 125 0 -9.57 -0.3246 MIMAT0004710 rno-miR-17-3p 303567 Tmub2 ggUGUUCACGGAAGUGACGUCa |||:| : ||||||| ucACAGGGAUGAAGACUGCAGu 2 21 424 445 [rn4:10:91368546-91368567:+] 0.6314 144 7 -21.86 -0.5526 MIMAT0004711 rno-miR-21* 303567 Tmub2 cuGUCGGGUAGCUGAC-GACAAc |||: : |:| || ||||| ccCAGUGUCUUGCAUGUCUGUUc 2 21 291 313 [rn4:10:91368413-91368435:+] 0.6314 120 0 -13.79 -0.5556 MIMAT0005445 rno-miR-29b-1* 303567 Tmub2 uuuaGAUUUGGUGG-UAUACUUu :||:|: ::| ||||||| gcccUUAGAUGGUCAAUAUGAAu 2 19 711 733 [rn4:10:91368833-91368855:+] 0.6314 153 7 -11.81 -0.9391 MIMAT0000902 rno-miR-300-3p 303567 Tmub2 cuucucucgaACGGGAACGUAu || :||||||| ccuagcccagUG-UCUUGCAUg 2 13 286 306 [rn4:10:91368408-91368428:+] 0.6314 142 7 -14.07 -0.2372 MIMAT0003202 rno-miR-382* 303567 Tmub2 uucacAACAG--GCACUUACUaa | ||| : ||||||| uuagaUGGUCAAUAUGAAUGAau 3 17 715 737 [rn4:10:91368837-91368859:+] 0.6314 127 0 -10.24 -0.1103 MIMAT0003212 rno-miR-20b-3p 303567 Tmub2 ggUCUUCACGAGUGUGACGUCa ||:: || | ||||||| acAGGGAUG--AAGACUGCAGu 2 21 426 445 [rn4:10:91368548-91368567:+] 0.6314 145 7 -23.30 -0.5490 MIMAT0003378 rno-miR-378* 303567 Tmub2 ugUGUCCUGGACCUCAGUCCUc |:| || || |||||||| guAUA-GAGCU-CAGUCAGGAa 2 21 561 580 [rn4:10:91368683-91368702:+] 0.6314 152 7 -17.73 -0.8512 MIMAT0003382 rno-miR-664 303567 Tmub2 aucCGACCCCUCAU--UUACUUAu | ||| | || ||||||| uuaGAUGGUCAAUAUGAAUGAAUa 2 20 715 738 [rn4:10:91368837-91368860:+] 0.6314 150 7 -11.88 -1.0372 MIMAT0005322 rno-miR-532-5p 303567 Tmub2 ugUCAGGAUGUGAGUUCCGUAc || | || | ||||||| ggAGACAUAGA---AAGGCAUg 2 21 9 27 [rn4:10:91368131-91368149:+] 0.6314 144 7 -16.22 -0.2837 MIMAT0012822 rno-miR-202 303567 Tmub2 uuucuucauAUACGUAUCCUu |:| ||||||| uggguacccUGUCCAUAGGAc 2 13 106 126 [rn4:10:91368228-91368248:+] 0.6314 148 7 -11.04 -0.2197 MIMAT0012825 rno-miR-105 303567 Tmub2 uggugucuGUAGA-CUCGUGAAc | |:| ||||||| uuugcuuuCUUUUAAAGCACUUu 2 15 511 533 [rn4:10:91368633-91368655:+] 0.6314 141 7 -9.30 -1.0230 MIMAT0012829 rno-miR-511 303567 Tmub2 acucacGUCUCGUUUUCCGUa || || ||||||| gggagaCAUAG--AAAGGCAu 2 16 8 26 [rn4:10:91368130-91368148:+] 0.6314 144 7 -14.93 -0.3916 MIMAT0012850 rno-miR-465 303567 Tmub2 guguggucguGGCAAGAUUUAu |: |||||||| gcuugcccuuCUUUUCUAAAUa 2 13 534 555 [rn4:10:91368656-91368677:+] 0.6314 148 7 -12.03 -1.1190 MIMAT0001619 rno-miR-322 303567 Tmub2 agGUUUUGUACUUAACGACGAc | ||:| |: ||||||| ggCCAAGCCCCAGCUGCUGCUa 2 21 597 618 [rn4:10:91368719-91368740:+] 0.6314 152 7 -16.50 -0.2033 MIMAT0000602 rno-miR-20a 303567 Tmub2 gaUGGACGUGAUAUUCGUGAAAu :|:| | :| ||||||||| uuGCUUUCUUUUAAAGCACUUUg 2 22 512 534 [rn4:10:91368634-91368656:+] 0.6314 161 7 -16.62 -0.9956 MIMAT0000784 rno-miR-15b 303567 Tmub2 acaUUUGGUACUACACGACGAu ||:|| | ||||||| gccAAGCC-CCAGCUGCUGCUa 2 20 598 618 [rn4:10:91368720-91368740:+] 0.6314 145 7 -16.02 -0.1995 MIMAT0000785 rno-miR-16 303567 Tmub2 gcGGUUAUAAAUGCACGACGAu |||| | ||||||| ggCCAAGCCCCAGCUGCUGCUa 2 21 597 618 [rn4:10:91368719-91368740:+] 0.6314 144 7 -20.10 -0.2052 MIMAT0000786 rno-miR-17-5p 303567 Tmub2 gaUGGACGUGACAUUCGUGAAAc :|:| | :| ||||||||| uuGCUUUCUUUUAAAGCACUUUg 2 22 512 534 [rn4:10:91368634-91368656:+] 0.6314 161 7 -18.02 -0.9956 MIMAT0000810 rno-miR-31 303567 Tmub2 gucgauacggucguaGAACGGa |||||| uuuuaaagcacuuugCUUGCCc 2 8 520 541 [rn4:10:91368642-91368663:+] 0.6314 120 6 -12.62 -0.1154 MIMAT0000817 rno-miR-93 303567 Tmub2 gaUGGACGUGCUUGUCGUGAAAc :|:| | : | |||||||| uuGCUUUCUUUUAAAGCACUUUg 2 22 512 534 [rn4:10:91368634-91368656:+] 0.6314 153 7 -17.90 -1.0015 MIMAT0000825 rno-miR-106b 303567 Tmub2 uaGACGUGACAGUCGUGAAAu :| | :| |||||||| gcUUUCUUUUAAAGCACUUUg 2 20 514 534 [rn4:10:91368636-91368656:+] 0.6314 147 7 -12.88 -0.9956 MIMAT0000844 rno-miR-138 303567 Tmub2 gcCGGACUAAGUGUUGU-GGUCGa |:|| | :|:|:|| ||||| caGUCUUACCUAUAGCAUCCAGCu 2 22 442 465 [rn4:10:91368564-91368587:+] 0.6314 129 0 -21.03 -0.1218 MIMAT0000857 rno-miR-181c 303567 Tmub2 ugagUGGCUGUCCAACUUACaa |: | || |||||| uuagAUGGUCAAUAUGAAUGaa 3 19 715 736 [rn4:10:91368837-91368858:+] 0.6314 126 0 -9.52 -0.2276 MIMAT0000858 rno-miR-181a 303567 Tmub2 ugagUGGCUGUCGCAACUUACaa |: | || : |||||| uuagAUGGUCAAU-AUGAAUGaa 3 20 715 736 [rn4:10:91368837-91368858:+] 0.6314 121 0 -8.10 -0.2256 MIMAT0000859 rno-miR-181b 303567 Tmub2 ugGGUGGCUGUC-GU--UACUUACaa || : ||::| || ||||||| gcCCUUAGAUGGUCAAUAUGAAUGaa 3 22 711 736 [rn4:10:91368833-91368858:+] 0.6314 135 0 -17.70 -0.2256 MIMAT0000870 rno-miR-195 303567 Tmub2 cgguuauaaagacACGACGAu ||||||| gccaagccccagcUGCUGCUa 2 9 598 618 [rn4:10:91368720-91368740:+] 0.6314 140 7 -18.22 -0.2052 MIMAT0000888 rno-miR-218 303567 Tmub2 uguaccaaucuaGUUCGUGUu |||||||| cagauaucucugCAAGCACAa 2 10 165 185 [rn4:10:91368287-91368307:+] 0.6314 145 7 -13.96 -0.8061 MIMAT0000895 rno-miR-291a-3p 303567 Tmub2 ccguguguuucaccUUCGUGAAa |||||||| uuugcuuucuuuuaAAGCACUUu 2 10 511 533 [rn4:10:91368633-91368655:+] 0.6314 145 7 -12.51 -1.0202 MIMAT0003211 rno-miR-20b-5p 303567 Tmub2 ugGACGUGAUACUCGUGAAAc :| | :| |||||||| gcUUUCUUUUAAAGCACUUUg 2 20 514 534 [rn4:10:91368636-91368656:+] 0.6314 147 7 -15.01 -0.9956 MIMAT0003381 rno-miR-499 303567 Tmub2 uuuguagUGACGUUCAGAAUu ||||| ||||||| gaugaagACUGC-AGUCUUAc 2 15 431 450 [rn4:10:91368553-91368572:+] 0.6314 156 7 -15.15 -0.1388 MIMAT0003383 rno-miR-497 303567 Tmub2 auGUUUGGUGUCACACGACGAc |||:|| ||| ||||||| gcCAAGCCCCAG-CUGCUGCUa 2 21 598 618 [rn4:10:91368720-91368740:+] 0.6314 166 7 -21.90 -0.1959 MIMAT0005299 rno-miR-181d 303567 Tmub2 ugggUGGCUGUUGUUACUUACaa |: | |||: ||||||| uuagAUGGUCAAU-AUGAAUGaa 3 20 715 736 [rn4:10:91368837-91368858:+] 0.6314 137 0 -12.18 -0.2235

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G101458 Tmub2 Rattus norvegicus 303567

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Tmub2 RAID00151030 rno-miR-181d-5p miRNA MIMAT0005299 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID00233286 rno-miR-499-5p miRNA MIMAT0003381 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID00345577 rno-miR-3541 miRNA MIMAT0017795 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID00660023 rno-miR-129-5p miRNA MIMAT0000600 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID00706741 rno-miR-20a-5p miRNA MIMAT0000602 Tmub2 mRNA 303567 Prediction 0.2381 Tmub2 RAID00802087 rno-miR-378a-5p miRNA MIMAT0003378 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID01111552 rno-miR-384-5p miRNA MIMAT0005309 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID01165176 rno-miR-93-5p miRNA MIMAT0000817 Tmub2 mRNA 303567 Prediction 0.2381 Tmub2 RAID01190272 rno-miR-20b-5p miRNA MIMAT0003211 Tmub2 mRNA 303567 Prediction 0.2381 Tmub2 RAID01387703 rno-miR-17-5p miRNA MIMAT0000786 Tmub2 mRNA 303567 Prediction 0.2381 Tmub2 RAID01545778 rno-miR-195-5p miRNA MIMAT0000870 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID01609366 rno-miR-291a-3p miRNA MIMAT0000895 Tmub2 mRNA 303567 Prediction 0.2381 Tmub2 RAID01861642 rno-miR-153-3p miRNA MIMAT0000855 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID01980753 rno-miR-448-3p miRNA MIMAT0001534 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02063266 rno-miR-31a-5p miRNA MIMAT0000810 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02146081 rno-miR-30d-5p miRNA MIMAT0000807 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02146157 rno-miR-291b miRNA MIMAT0017822 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02178378 rno-miR-181b-5p miRNA MIMAT0000859 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02260896 rno-miR-30e-5p miRNA MIMAT0000805 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02333803 rno-miR-181c-5p miRNA MIMAT0000857 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02497809 rno-miR-322-5p miRNA MIMAT0001619 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02569445 rno-miR-449a-3p miRNA MIMAT0017181 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02570527 rno-miR-214-5p miRNA MIMAT0017159 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02706780 rno-miR-106b-5p miRNA MIMAT0000825 Tmub2 mRNA 303567 Prediction 0.2381 Tmub2 RAID02768185 rno-miR-486 miRNA MIMAT0037265 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID02823385 rno-miR-218a-5p miRNA MIMAT0000888 Tmub2 mRNA 303567 Prediction 0.2202 Tmub2 RAID03010228 rno-miR-138-5p miRNA MIMAT0000844 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID03117926 rno-miR-16-5p miRNA MIMAT0000785 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID03192479 rno-miR-105 miRNA MIMAT0012825 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID03430921 rno-miR-15b-5p miRNA MIMAT0000784 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID03481392 rno-miR-30a-5p miRNA MIMAT0000808 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID03490591 rno-miR-465-5p miRNA MIMAT0012850 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID03646988 rno-miR-30b-5p miRNA MIMAT0000806 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID03775149 rno-miR-30c-5p miRNA MIMAT0000804 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID03907841 rno-miR-181a-5p miRNA MIMAT0000858 Tmub2 mRNA 303567 Prediction 0.1828 Tmub2 RAID03931262 rno-miR-497-5p miRNA MIMAT0003383 Tmub2 mRNA 303567 Prediction 0.1828