DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G120251 Rbbp4 Rattus norvegicus 313048

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Rbbp4; rCG_30896 rno-miR-133a 62 83 -UGUCGACCAACUUCCCCUG-GUU- ||| :||||| ||||| ||: AACA-UUGGUUU---GGGACACAGA Rbbp4; rCG_30896 rno-miR-133b 65 83 AUCGACCAACUUCCCCUG-GUU- :||||| ||||| ||: --AUUGGUUU---GGGACACAGA Rbbp4; rCG_30896 rno-miR-150 54 78 GUGACCA----UGUUCCC-AACCCUCU ||| ||| || |||||| --AUGGAUUUAACAUUGGUUUGGGAC- Rbbp4; rCG_30896 rno-miR-151* 20 47 AUGAUCUGAC----ACUCGAGGAG-CU- :|||||| || :||||| || -UUUAGACUCUCCUUGUUUUCCUCUGAA Rbbp4; rCG_30896 rno-miR-184 77 101 -UGG--GAAUAGUCAAGA-GGCAGGU- || ||| |||| |:||||| CACAGACUUU---GUUCAGCUGUCCAA Rbbp4; rCG_30896 rno-miR-24 32 55 GACA--AGGACGACUU--GACUCGGU ||| |||| ||||| ||||| UUGUUUUCCU-CUGAAGCCUGAGA-- Rbbp4; rCG_30896 rno-miR-298 23 51 CCUUCUUGU------CGGGAGGAGA---CGG- :|| |: |||||| ||| ----AGACUCUCCUUGUUUUCCUCUGAAGCCU Rbbp4; rCG_30896 rno-miR-340 39 60 CCGAUAUUUCAUUGACUCUGCCU- || |:||| ||||||:||| -CCUCUGAAGC--CUGAGAUGGAU Rbbp4; rCG_30896 rno-miR-345 63 95 CGUGACCUGAUCC-----------CCAGUCGU ||:||| |:|| | ||||| ACAUUGGUUUGGGACACAGACUUUGUUCAGCU Rbbp4; rCG_30896 rno-miR-493 71 93 GACCGUGUGUCAUCUGG---AAGU- ||| |||| ||||: |||| UUGGGACAC---AGACUUUGUUCAG Rbbp4; rCG_30896 rno-miR-540 29 52 -GGUCCUAGCUGGAGAC--UGGA- || :|: |||||| :||| UCCUU-GUUUUCCUCUGAAGCCUG Rbbp4; rCG_30896 rno-miR-133a 63 81 UGUCGACCAACUUCCCCUG-GUu ||| :||||| ||||| || ACA-TTGGTT---TGGGACACAg Rbbp4; rCG_30896 rno-miR-133b 61 81 AUCG--ACCAACUUCCCCUG-GUu || | ||||| ||||| || TAACATTGGTT---TGGGACACAg Rbbp4; rCG_30896 rno-miR-150 56 78 gugaccaUGU-UCCCAACCCUcu ||| || |||||| ggatttaACATTGGTTTGGGAca Rbbp4; rCG_30896 rno-miR-151* 19 35 AUGAUCUGACACUCGAGGAGCu | :|||||| |||||:| TTTTAGACT-----CTCCTTGt Rbbp4; rCG_30896 rno-miR-184 82 99 UGGGAAUAGUCAAGAGGCAGGU ||::| |||| |:||||| ACTTTGTTCAG----CTGTCCA Rbbp4; rCG_30896 rno-miR-24 34 56 gACAAGGACGACUU--GACUCggu | ||||| ||||| ||||| gTTTTCCT-CTGAAGCCTGAGatg Rbbp4; rCG_30896 rno-miR-298 25 46 ccuucuuguCGGGAGGAGACgg |:::||||||| actctccttGTTTTCCTCTGaa Rbbp4; rCG_30896 rno-miR-340 38 58 ccGAUAUUUCAUUGACUCUGCCU || |:||| ||||||:||| tcCTCTGAAG--CCTGAGATGGA Rbbp4; rCG_30896 rno-miR-345 76 94 cGUGACCUGAUCCCCAGUCGu ||| |||| | ||||| aCAC-AGACT-TTGTTCAGCt Rbbp4; rCG_30896 rno-miR-540 30 50 GGUCCUAGCUGGAGACU--GGA || | |: ||||||| ||| CCTTG-TTTTCCTCTGAAGCCT

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rbbp4 RAID00982382 rno-miR-203b-5p miRNA MIMAT0017799 Rbbp4 mRNA 313048 Prediction 0.1828 Rbbp4 RAID01581098 rno-miR-337-5p miRNA MIMAT0017035 Rbbp4 mRNA 313048 Prediction 0.1828 Rbbp4 RAID02049046 rno-miR-323-5p miRNA MIMAT0004637 Rbbp4 mRNA 313048 Prediction 0.1828 Rbbp4 RAID02507735 rno-miR-497-3p miRNA MIMAT0017230 Rbbp4 mRNA 313048 Prediction 0.1828 Rbbp4 RAID02610529 rno-miR-7a-1-3p miRNA MIMAT0000607 Rbbp4 mRNA 313048 Prediction 0.1828 Rbbp4 RAID03002278 rno-miR-465-5p miRNA MIMAT0012850 Rbbp4 mRNA 313048 Prediction 0.1828 Rbbp4 RAID03021448 rno-miR-3561-5p miRNA MIMAT0017830 Rbbp4 mRNA 313048 Prediction 0.1828 Rbbp4 RAID03807101 rno-miR-3065-5p miRNA MIMAT0017839 Rbbp4 mRNA 313048 Prediction 0.1828 Rbbp4 RAID03836213 rno-miR-190a-3p miRNA MIMAT0017145 Rbbp4 mRNA 313048 Prediction 0.1828 Rbbp4 RAID03860560 rno-miR-32-3p miRNA MIMAT0017103 Rbbp4 mRNA 313048 Prediction 0.1828