DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004646 rno-miR-338* 314243 Wdr89 gugagucGUGGUCCUAUAACAa || ||| ||||| | gaaaauaCAACAGAAUAUUUUa 2 16 688 709 [rn4:6:98231355-98231376:-] 0.5278 127 0 -6.63 -0.1297 MIMAT0004654 rno-miR-344-5p 314243 Wdr89 ggACCUUAGAUCGGUC-CUCGGACu | ||| | |:|| ||||||| aaUUGAAACAUUCUAGUGAGCCUGa 2 23 448 472 [rn4:6:98231592-98231616:-] 0.5098 157 7 -21.12 -1.0751 MIMAT0003153 rno-miR-24-1* 314243 Wdr89 gacuauagucgagucAUCCGUg |||||| agacguaaaguaagaUAGGCAa 2 8 664 685 [rn4:6:98231379-98231400:-] 0.5423 120 6 -12.62 -0.1480 MIMAT0005441 rno-miR-24-2* 314243 Wdr89 ugacaaagucgagucAUCCGUg |||||| agacguaaaguaagaUAGGCAa 2 8 664 685 [rn4:6:98231379-98231400:-] 0.5423 120 6 -12.72 -0.1466 MIMAT0004714 rno-miR-26b* 314243 Wdr89 cuCGGUUCAUUACCUCUUGUCc || || || | ||||| agGCAAAUGAAAAUACAACAGa 2 21 680 701 [rn4:6:98231363-98231384:-] 0.5423 120 0 -6.39 -0.1354 MIMAT0004718 rno-miR-29a* 314243 Wdr89 gacuugUGGUUUUCUUUAGUCa | :| || ||||||| caguugAGUAUAA-AAAUCAGu 2 17 174 194 [rn4:6:98231870-98231890:-] 0.5287 146 7 -14.16 -0.7950 MIMAT0004731 rno-miR-125b* 314243 Wdr89 ucCAGGGUUCUCG-GACUGAACa || : || | | ||||||| gaGUAUAAAAAUCAGUGACUUGa 2 21 179 201 [rn4:6:98231863-98231885:-] 0.5287 147 7 -10.54 -0.7004 MIMAT0004731 rno-miR-125b* 314243 Wdr89 uccaggguucucggACUGAACa ||||||| aauauauuugguaaUGACUUGu 2 9 520 541 [rn4:6:98231523-98231544:-] 0.5098 140 7 -11.88 -1.1306 MIMAT0000893 rno-miR-290 314243 Wdr89 uuuuucacGGGGGUAUCAAACUc | |: : ||||||| ---ugucaCGCUGGGAGUUUGAa 2 16 1 20 [rn4:6:98232044-98232063:-] 0.5714 143 7 -11.46 -1.2491 MIMAT0000893 rno-miR-290 314243 Wdr89 uuuuucacggggguaUCAAACUc :|||||| aguuaguaaauguuaGGUUUGAa 2 9 241 263 [rn4:6:98231801-98231823:-] 0.5739 124 6 -8.37 -0.1485 MIMAT0004743 rno-miR-300-5p 314243 Wdr89 ugUUUCCUA-UUGGAGAGAAGuu ::|| | || |||||| ugGGAGUUUGAAAAGCUCUUCug 3 21 9 31 [rn4:6:98232033-98232055:-] 0.5714 123 0 -11.73 -0.1442 MIMAT0003121 rno-miR-483 314243 Wdr89 ugUUCUG-CCCUCCCCUCCU-CACu ||| : |||||| |||| ||| gaAAGCUGGGGAGGCAAGGAGGUGg 2 22 293 317 [rn4:6:98231747-98231771:-] 0.5274 132 0 -25.02 -0.7157 MIMAT0003177 rno-miR-541 314243 Wdr89 ucAC-ACUGGUUGUAGUCUUAG-GGAa || |||| || | : |||| ||| uuUGCUGACAAAAAAAGAAAUCACCUu 2 24 622 648 [rn4:6:98231416-98231442:-] 0.5423 126 0 -13.88 -1.0122 MIMAT0004791 rno-miR-379* 314243 Wdr89 caaucaccuggUACAAUGUAUc || |||:||| auauuuuaaaaAUAUUAUAUAa 2 12 702 723 [rn4:6:98231341-98231362:-] 0.5278 131 0 -3.33 -0.1860 MIMAT0003207 rno-miR-369-3p 314243 Wdr89 uuucuaguugguacAUAAUAa |||||| gaauauuuuaaaaaUAUUAUa 2 8 700 720 [rn4:6:98231344-98231364:-] 0.5278 120 6 -1.88 -0.6059 MIMAT0003380 rno-miR-505 314243 Wdr89 ccUUUGGUCGUUCACAACUg ||||| || |||||| ugAAACC--CAUCUGUUGAg 2 19 225 242 [rn4:6:98231822-98231839:-] 0.6203 127 6 -13.99 -0.1195 MIMAT0003382 rno-miR-664 314243 Wdr89 auccgaccccUCAUUUACUUau :| ||||||| aaguaagauaGGCAAAUGAAaa 3 13 671 692 [rn4:6:98231372-98231393:-] 0.5423 128 0 -8.55 -0.1716 MIMAT0005287 rno-miR-879 314243 Wdr89 ccgaaUCUCGAUA-UUCGGAGa | | :| | ||||||| cuacaAUAUUUUUAAAGCCUCc 2 17 153 174 [rn4:6:98231890-98231911:-] 0.5287 143 7 -11.56 -1.0577 MIMAT0005317 rno-miR-463 314243 Wdr89 gaUGGGUUUAACCG------CAGAUAGu |:|::|| |||| ||||||| acAUCUGAAAUGGCUUACUUGUCUAUCc 2 21 349 376 [rn4:6:98231688-98231715:-] 0.5274 151 7 -16.96 -0.4965 MIMAT0005319 rno-miR-484 314243 Wdr89 uagcccuccccUGACUCGGACu | |||||||| ugaaacauucuAGUGAGCCUGa 2 12 451 472 [rn4:6:98231592-98231613:-] 0.5098 147 7 -16.50 -1.0825 MIMAT0012832 rno-miR-568 314243 Wdr89 cacACAUAUGUA-AAUAUGUa | || | || |||||:| uauUUUAAAAAUAUUAUAUAa 2 18 703 723 [rn4:6:98231341-98231361:-] 0.5134 136 0 -5.21 -0.2168 MIMAT0012847 rno-miR-293 314243 Wdr89 guuucacagUGUGUCAAACUCa | :::||||||| gaggcaaggAGGUGGUUUGAGu 2 14 303 324 [rn4:6:98231740-98231761:-] 0.5274 145 7 -15.86 -0.3022 MIMAT0012848 rno-miR-294 314243 Wdr89 ucuaucccggagGUAAAACUc |||||||| aauuacaaaccgCAUUUUGAa 2 10 208 228 [rn4:6:98231836-98231856:-] 0.5745 145 7 -10.86 -0.5879 MIMAT0000575 rno-miR-335 314243 Wdr89 uguaaaAAGCAAUAACGAGAAcu ||:| | |||||| ugggagUUUG-AAAAGCUCUUcu 3 18 9 30 [rn4:6:98232034-98232055:-] 0.5714 123 0 -7.40 -0.1194 MIMAT0000583 rno-miR-339-5p 314243 Wdr89 gcacucgaggaccucCUGUCCCu ||||||| aaaaaucagugacuuGACAGGGa 2 9 185 207 [rn4:6:98231857-98231879:-] 0.5287 140 7 -19.43 -1.1733 MIMAT0000606 rno-miR-7a 314243 Wdr89 ugUUGUUUUAGUGAUCAGA-AGGu || :: |:||| |||| ||| ugAAAUGGCUUACUUGUCUAUCCa 2 22 354 377 [rn4:6:98231687-98231710:-] 0.5274 125 0 -13.80 -0.5300 MIMAT0000794 rno-miR-24 314243 Wdr89 gacaAGGACGACUU-GACUCGGu |:|| |||: ||||||| aacaUUCUAGUGAGCCUGAGCCu 2 19 454 476 [rn4:6:98231588-98231610:-] 0.5098 157 7 -19.93 -0.7630 MIMAT0000800 rno-miR-28 314243 Wdr89 gaguuAUCUGACACUCGAGGAa || || | ||||||| ggcuuUAAAC--UCAGCUCCUu 2 18 329 348 [rn4:6:98231716-98231735:-] 0.5274 146 7 -14.45 -0.5393 MIMAT0000855 rno-miR-153 314243 Wdr89 cuAGUGAAAACAC--U-GAUA-CGUu |||:|||| || | |||| ||| aaUCAUUUUUUUGCCACCUAUAGCAc 2 21 38 63 [rn4:6:98232001-98232026:-] 0.5287 130 0 -13.02 -0.6404 MIMAT0000863 rno-miR-186 314243 Wdr89 ucgGGUUUUCCU-CUUAAGAAAc :||::|| | :|||||| caaUCAGGAGCAUCUGUUCUUUa 2 20 559 581 [rn4:6:98231483-98231505:-] 0.5098 134 6 -11.42 -0.1054 MIMAT0000876 rno-miR-203 314243 Wdr89 gaucaccaggAUUUGUAAAGUg ||: ||||||| ccggccugugUAGUCAUUUCAa 2 13 381 402 [rn4:6:98231662-98231683:-] 0.5274 148 7 -13.65 -0.6830 MIMAT0000896 rno-miR-292-5p 314243 Wdr89 guUUUCUCGGGGGUCAAACUCa ||:||| ::||||||| gcAAGGAG---GUGGUUUGAGu 2 21 306 324 [rn4:6:98231740-98231758:-] 0.5274 148 7 -16.68 -0.2945 MIMAT0003119 rno-miR-224 314243 Wdr89 auUUGCCUUGGUGAUCACUGAAc |:: || |: |||||||| ugAGUAUAAAAAUCAGUGACUUg 2 22 178 200 [rn4:6:98231864-98231886:-] 0.5287 153 7 -15.33 -0.6430 MIMAT0003119 rno-miR-224 314243 Wdr89 auUUGCCUUGGUGAUCACUGAAc ||: | ::: || |||||| aaAAUAUAUUUGGUAAUGACUUg 2 22 518 540 [rn4:6:98231524-98231546:-] 0.5098 125 6 -11.57 -0.1118 MIMAT0003199 rno-miR-381 314243 Wdr89 cucucgaacggGAACAUAu ||||||| uuugguaaugaCUUGUAUc 2 9 526 544 [rn4:6:98231520-98231538:-] 0.5098 140 7 -8.17 -0.8260 MIMAT0003203 rno-miR-485 314243 Wdr89 cuuaaguagugccggUCGGAGa |||||| cuacaauauuuuuaaAGCCUCc 2 8 153 174 [rn4:6:98231890-98231911:-] 0.5287 120 6 -11.04 -0.1049 MIMAT0003208 rno-miR-374 314243 Wdr89 gugaaucguccaacAUAAUAUa ||||||| gaauauuuuaaaaaUAUUAUAu 2 9 700 721 [rn4:6:98231343-98231364:-] 0.5278 140 7 -4.62 -1.2991 MIMAT0005300 rno-miR-182 314243 Wdr89 gcCACACUCAAG-AUGGUAACGGUuu || ||| || | :: |||||| ugGUUUGAAAUCAUUUUUUUGCCAcc 3 24 30 55 [rn4:6:98232009-98232034:-] 0.5287 138 0 -14.95 -0.1024 MIMAT0005311 rno-miR-410 314243 Wdr89 uguccgguagacacAAUAUAa |||||| auauuuuaaaaauaUUAUAUa 2 8 702 722 [rn4:6:98231342-98231362:-] 0.5278 120 6 -3.84 -0.5911 MIMAT0005331 rno-miR-708 314243 Wdr89 gggUCGAUCUAACAUUCGAGGAa :||| | | ||||||| augGGCUUUAAACUCAGCUCCUu 2 21 326 348 [rn4:6:98231716-98231738:-] 0.5274 148 7 -16.32 -0.5464

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G101673 Wdr89 Rattus norvegicus 314243

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Wdr89 RAID00214413 rno-miR-182 miRNA MIMAT0005300 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID00243405 rno-miR-335 miRNA MIMAT0000575 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID00294004 rno-miR-381-3p miRNA MIMAT0003199 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID00426305 rno-miR-203a-3p miRNA MIMAT0000876 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID00519888 rno-miR-28-5p miRNA MIMAT0000800 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID00645470 rno-miR-181b-1-3p miRNA MIMAT0017139 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID00681270 rno-miR-484 miRNA MIMAT0005319 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID01517532 rno-miR-6334 miRNA MIMAT0025075 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID01556161 rno-miR-186-5p miRNA MIMAT0000863 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID01556755 rno-miR-3586-5p miRNA MIMAT0017880 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID01695223 rno-miR-708-5p miRNA MIMAT0005331 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID01817267 rno-miR-125b-2-3p miRNA MIMAT0026467 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID01883040 rno-miR-292-5p miRNA MIMAT0000896 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID02424008 rno-miR-485-5p miRNA MIMAT0003203 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID02467068 rno-miR-153-3p miRNA MIMAT0000855 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID02572732 rno-miR-339-5p miRNA MIMAT0000583 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID02895854 rno-miR-879-5p miRNA MIMAT0005287 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID02948484 rno-miR-344a-5p miRNA MIMAT0004654 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID03323183 rno-miR-7a-5p miRNA MIMAT0000606 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID03542051 rno-miR-224-5p miRNA MIMAT0003119 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID03560103 rno-miR-374-5p miRNA MIMAT0003208 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID03592814 rno-miR-497-3p miRNA MIMAT0017230 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID03743461 rno-miR-24-3p miRNA MIMAT0000794 Wdr89 mRNA 314243 Prediction 0.1828 Wdr89 RAID04026792 rno-miR-410-3p miRNA MIMAT0005311 Wdr89 mRNA 314243 Prediction 0.1828