DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000557 | rno-miR-325-5p | 64702 | Trim17 | ugugaaugACUCGUGGAU-GAUCc | ||: |||||| |||| | caccaccgUGGCCACCUACCUAGg | 2 | 16 | 61 | 84 | [rn4:10:45263084-45263107:+] | 0.5170 | 127 | 0 | -22.72 | -0.2175 |
MIMAT0004787 | rno-miR-543 | 64702 | Trim17 | cgcuuuuugugCG-CCCGUUGAa | || |||||||| | uaccugugcugGCAGGGCAACUa | 2 | 12 | 118 | 140 | [rn4:10:45263141-45263163:+] | 0.5170 | 146 | 7 | -17.91 | -0.4939 |
MIMAT0003178 | rno-miR-542-5p | 64702 | Trim17 | agCACUGUACUACUAGGGG-CUc | ||| :|||:| ||||| || | guGUGCUAUGGU--UCCCCAGAa | 2 | 21 | 28 | 48 | [rn4:10:45263051-45263071:+] | 0.5170 | 125 | 0 | -22.30 | -0.1446 |
MIMAT0012837 | rno-miR-632 | 64702 | Trim17 | aggcCGUCCUUUGUCUGUg | | |||: ||||||| | uggaGAAGGGCACAGACAc | 2 | 16 | 6 | 24 | [rn4:10:45263029-45263047:+] | 0.5170 | 155 | 7 | -24.37 | -0.1002 |
MIMAT0012850 | rno-miR-465 | 64702 | Trim17 | gugUGGUCGUGGCAAGAUUUAu | |:|| | | |||||||| | augAUCAACUCAUUUCUAAAUa | 2 | 20 | 230 | 251 | [rn4:10:45263253-45263274:+] | 0.4906 | 159 | 7 | -11.90 | -1.2040 |
MIMAT0000848 | rno-miR-142-3p | 64702 | Trim17 | agguAUUUCAUCCUU--UG-UGAUGu | | ||||: ||| || ||||| | augcUCAAGUGAGAAAGACGACUACa | 2 | 20 | 164 | 189 | [rn4:10:45263187-45263212:+] | 0.5170 | 126 | 0 | -14.56 | -1.1054 |
MIMAT0000889 | rno-miR-219-5p | 64702 | Trim17 | ucuuaacgcaaaccUGUUAGu | |||||| | caacuaagcaaaauACAAUCa | 2 | 8 | 135 | 155 | [rn4:10:45263158-45263178:+] | 0.5170 | 120 | 6 | -7.85 | -0.1613 |
MIMAT0005284 | rno-miR-874 | 64702 | Trim17 | agccAGGGAGCC--CGGUCCCGUc | | ||| | | ||||||| | uuaaUACCUGUGCUGGCAGGGCAa | 2 | 19 | 114 | 137 | [rn4:10:45263137-45263160:+] | 0.5170 | 145 | 7 | -19.52 | -0.4845 |