Trim17
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000557rno-miR-325-5p64702Trim17ugugaaugACUCGUGGAU-GAUCc ||: |||||| |||| caccaccgUGGCCACCUACCUAGg2166184[rn4:10:45263084-45263107:+]0.51701270-22.72-0.2175
MIMAT0004787rno-miR-54364702Trim17cgcuuuuugugCG-CCCGUUGAa || |||||||| uaccugugcugGCAGGGCAACUa212118140[rn4:10:45263141-45263163:+]0.51701467-17.91-0.4939
MIMAT0003178rno-miR-542-5p64702Trim17agCACUGUACUACUAGGGG-CUc ||| :|||:| ||||| || guGUGCUAUGGU--UCCCCAGAa2212848[rn4:10:45263051-45263071:+]0.51701250-22.30-0.1446
MIMAT0012837rno-miR-63264702Trim17aggcCGUCCUUUGUCUGUg | |||: ||||||| uggaGAAGGGCACAGACAc216624[rn4:10:45263029-45263047:+]0.51701557-24.37-0.1002
MIMAT0012850rno-miR-46564702Trim17gugUGGUCGUGGCAAGAUUUAu |:|| | | |||||||| augAUCAACUCAUUUCUAAAUa220230251[rn4:10:45263253-45263274:+]0.49061597-11.90-1.2040
MIMAT0000848rno-miR-142-3p64702Trim17agguAUUUCAUCCUU--UG-UGAUGu | ||||: ||| || ||||| augcUCAAGUGAGAAAGACGACUACa220164189[rn4:10:45263187-45263212:+]0.51701260-14.56-1.1054
MIMAT0000889rno-miR-219-5p64702Trim17ucuuaacgcaaaccUGUUAGu |||||| caacuaagcaaaauACAAUCa28135155[rn4:10:45263158-45263178:+]0.51701206-7.85-0.1613
MIMAT0005284rno-miR-87464702Trim17agccAGGGAGCC--CGGUCCCGUc | ||| | | ||||||| uuaaUACCUGUGCUGGCAGGGCAa219114137[rn4:10:45263137-45263160:+]0.51701457-19.52-0.4845
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G055150Trim17Rattus norvegicus64702
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Trim17RAID01779162rno-miR-219a-5pmiRNAMIMAT0000889Trim17mRNA64702Prediction0.1828
Trim17RAID02213735rno-miR-142-3pmiRNAMIMAT0000848Trim17mRNA64702Prediction0.1828
Trim17RAID03920215rno-miR-874-3pmiRNAMIMAT0005284Trim17mRNA64702Prediction0.1828