DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ap1g2 rno-miR-140* 4 30 ACAGGCACCA-----AGAUGGGACACCAU |:||||| |||: |||| ||| --ACUGUGGUCAGUGUCUGGCCUG-GGUU Ap1g2 rno-miR-185 20 37 CUUGACGGAA--AGAGAGGU- |||| |:|||||| ----GGCCUGGGUUUCUCCAG Ap1g2 rno-miR-214 9 30 GACGG--ACAGACACGGACGACA- |:| |||||| ||||| || -GGUCAGUGUCUG-GCCUGG-GUU Ap1g2 rno-miR-29a 19 49 -UUGG--CUAAAG---UCU----ACCACGAU ::|| |:|||| ||: |||||: UGGCCUGGGUUUCUCCAGGCUCUUGGUGUC- Ap1g2 rno-miR-31 4 26 GUCGAUA-CGGUCGUAGAACGGA- ||:| |:|||::||| |||| --ACUGUGGUCAGUGUCUGGCCUG Ap1g2 rno-miR-331 16 47 AAGAUCCUAUCCG----GGUCC-----CCG- |||:| |:||: ||||| ||: GUCUGGCCUGGGUUUCUCCAGGCUCUUGGUG Ap1g2 rno-miR-335 27 46 UGUAAAAAGCAAUAACGAGAACU- |||| |||||||: ----GUUUCUCCAG-GCUCUUGGU Ap1g2 rno-miR-351 19 39 GUCCGAGUUUCCCGAGGA-GUCCCU ||| | |||:|:|| |||| -UGGC-CU--GGGUUUCUCCAGGC- Ap1g2 rno-miR-485 7 34 CUUAAGUAGU-----GCCGG--UCGGAGA- | :||| :|||| :|::||| ---GUGGUCAGUGUCUGGCCUGGGUUUCUC Ap1g2 rno-miR-540 4 26 GGUC-CUAGCUGGAGACUGGA- | | |:|| : ||||:||| ACUGUGGUCAGUGUCUGGCCUG Ap1g2 rno-miR-140* 1 12 acaggcaccaagauggGACACCAu ||||||| ------------cttaCTGTGGTc Ap1g2 rno-miR-185 15 35 cuuGA-CGGA--AAGAGAGGU || |||| |:|||||| tgtCTGGCCTGGGTTTCTCCA Ap1g2 rno-miR-214 5 26 GACGGACAGACACGGAC--GACa ||| : ||| |||:||| ||| CTG-TGGTCAGTGTCTGGCCTGg Ap1g2 rno-miR-29a 20 50 uuGG--CUAAA---GUCU----ACCAC-GAu || |:||| |||: ||||| || ggCCTGGGTTTCTCCAGGCTCTTGGTGTCTc Ap1g2 rno-miR-31 2 24 gucGAUA-CGGUCGUAGAACGGA ||:| |:|||::||| |||| ttaCTGTGGTCAGTGTCTGGCCT Ap1g2 rno-miR-335 23 44 uguaaAAAGCAAUAACGAGAACu |||| | ||||||| ctgggTTTC-TCCAGGCTCTTGg Ap1g2 rno-miR-351 18 39 GUCCGAGUUUCCCGAGGA-GUCCcu | ||| | |||:|:|| |||| CTGGC-C--TGGGTTTCTCCAGGct Ap1g2 rno-miR-485 20 41 cuuaaguagugccGGUCGGAGA |||| |||| ggcctgggtttctCCAGGCTCT Ap1g2 rno-miR-540 5 24 GGUCCUAGCUGGAGACUGGA |:: |:|| :: ||||:||| CTGTGGTCAGTGTCTGGCCT Ap1g2 rno-miR-335 37 44 UGUAA---------------------AAAGCAAUAACGAGAACU |||| |||||||: UUACUGUGGUCAGUGUCUGGCCUGGGUUUCUCCAG-GCUCUUGGU