iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs8152746	snp	A/T			intron-variant	Usp54	Rn_Celera	15:4132595	AGTATTAAGTCTGGC[A/T]CAGAGTTTAGGATCT	408223
rs8172589	snp	A/G			utr-variant-3-prime, downstream-variant-500B, upstream-variant-2KB	Usp54, LOC103693236	Rn_Celera	15:4189636	GTCTCTTTTTACCCA[A/G]AGTTCCTGGCCTGGA	408223
rs104934412	snp	C/T	0.5	0	intron-variant	Usp54	Rn_Celera	15:4154392	TTCCTCTGGGATAGC[C/T]GAGTCGTAACCCGGC	408223
rs104977132	snp	G/T	0	0	upstream-variant-2KB, intron-variant	Usp54	Rn_Celera	15:4124149	TGTAGATAATTTCAA[G/T]ATTAAGTGATTTATA	408223
rs104979682	snp	A/T	0.5	0	upstream-variant-2KB	Usp54	Rn_Celera	15:4091564	CGCTTTATTGGCCTA[A/T]GAGCAGAGACACTCC	408223
rs105223391	snp	C/G	0.5	0	intron-variant	Usp54	Rn_Celera	15:4162167	TCTGTTGGGAGGAGG[C/G]GTAAAGGCAGTGGTT	408223
rs105228992	snp	A/G	0.5	0	intron-variant, utr-variant-5-prime	Usp54	Rn_Celera	15:4114970	GGTTTAGCACTGGTA[A/G]TAGAAGTGTGCGCTT	408223
rs105339099	snp	G/T	0	0	intron-variant	Usp54	Rn_Celera	15:4160182	GTCAGAGTGGATGAA[G/T]CATAGGTTGGAAAGG	408223
rs105352198	snp	A/G	0	0	upstream-variant-2KB, utr-variant-5-prime	Usp54	Rn_Celera	15:4124919	AGCAGCAGTCCTACC[A/G]AGAAAGGACCCAGAC	408223
rs105359112	snp	C/T	0	0	upstream-variant-2KB	Usp54	Rn_Celera	15:4091830	GTGTTAGTGTGTGTG[C/T]GCGCGCGCGCCTGTG	408223
rs105396245	snp	C/T	0.5	0	intron-variant, downstream-variant-500B	Usp54, LOC103693236	Rn_Celera	15:4183398	TACTCAGGTGCTGTG[C/T]TAGAGAGGGCATGCA	408223
rs105419656	snp	G/T	0	0	intron-variant	Usp54	Rn_Celera	15:4092948	GGGCTGGGCCACCCG[G/T]CCGGCACCTGACTCC	408223
rs105441924	snp	C/G	0	0	intron-variant, upstream-variant-2KB	Usp54	Rn_Celera	15:4113772	AAGACGAAAGAAAAA[C/G]TGTAAGGAAAAAACC	408223
rs105504105	snp	C/T	0	0	intron-variant, upstream-variant-2KB	Usp54	Rn_Celera	15:4114115	AGCCATCTCTCCTGC[C/T]TCTATACCATTTTTA	408223
rs105539736	snp	C/T	0	0	intron-variant	Usp54	Rn_Celera	15:4145997	CTCATTTGTGCTTCC[C/T]CTTGTTGCTCCTCTC	408223
rs105600668	snp	C/T	0.5	0	intron-variant	Usp54	Rn_Celera	15:4167690	TTTTGTTAAGACATT[C/T]GGGCAAGCCATGGTG	408223
rs105620430	snp	A/G	0	0	intron-variant	Usp54	Rn_Celera	15:4116099	TAAAGTTGTGTAGAG[A/G]GAGGATACAATGATT	408223
rs105704177	snp	A/G	0.5	0	intron-variant	Usp54	Rn_Celera	15:4147773	GGGTGCTGGGATCCA[A/G]CACGGCAGGCAGGTC	408223
rs105735351	snp	C/T	0.5	0	intron-variant	Usp54	Rnor_6.0	15:4145915	CCCTTGTTGCTCCTC[C/T]CCCTGCAGGGCATCT	408223
rs105740061	snp	A/C	0	0	intron-variant	Usp54	Rn_Celera	15:4168414	CCAAAAGAGAAAGAA[A/C]CTGAGCTATAGAAAG	408223
rs105757885	snp	A/G	0	0	intron-variant	Usp54	Rn_Celera	15:4146261	GATGTTCAGAAGCTC[A/G]ATAACTCATTTGTGC	408223
rs105946254	snp	C/T	0.270115	0.249189	intron-variant	Usp54	Rn_Celera	15:4149956	TGAGCCTCATGCTCA[C/T]ACACCACTTGTGTGA	408223
rs105948418	snp	G/T	0	0	intron-variant	Usp54	Rn_Celera	15:4150795	TTTCTAGCCCACTTT[G/T]GTTATTGAATTCCTG	408223
rs105953735	snp	A/G	0.5	0	intron-variant	Usp54	Rn_Celera	15:4140858	AAGGGGTTGAAATTC[A/G]CAGCTGTCTAACTTG	408223
rs105994621	snp	C/T	0	0	intron-variant	Usp54	Rn_Celera	15:4142271	TCTGTGTGTGTGTGT[C/T]TGTGTGTGTGTGTGT	408223
rs106152104	snp	C/T	0.5	0	intron-variant	Usp54	Rn_Celera	15:4174289	GCTCAACAGCGCATG[C/T]GTAGTCTATGCCTTG	408223
rs106436931	snp	A/T	0	0	intron-variant	Usp54	Rn_Celera	15:4173234	GTTCTAAAGGCTAAT[A/T]AATAGCAATGGGCAG	408223
rs106490693	snp	C/G	0	0	intron-variant	Usp54	Rn_Celera	15:4146031	GCAGGGCATCTTTAA[C/G]CAGTTCCAGTGCAGT	408223
rs106739394	snp	A/T	0	0	intron-variant	Usp54	Rn_Celera	15:4126793	AAGGTGAGCACTACC[A/T]CTGCTTGGCCATTTA	408223
rs106744234	snp	A/C	0	0	upstream-variant-2KB, intron-variant	Usp54	Rn_Celera	15:4123981	GCGAGCTAGGTCTAC[A/C]TAGAGAGTTCAGGCC	408223
rs106805064	snp	C/T	0	0	upstream-variant-2KB, intron-variant	Usp54	Rn_Celera	15:4124001	GAGTTCAGGCCAGCA[C/T]GGTGAGACCCTGTCT	408223
rs106871997	snp	C/T	0	0	intron-variant	Usp54	Rn_Celera	15:4145994	AACTCATTTGTGCTT[C/T]CTCTTGTTGCTCCTC	408223
rs106931256	snp	A/G	0	0	intron-variant	Usp54	Rn_Celera	15:4182240	CCTACTAAGGCTTGA[A/G]CCCCCAATGCTTCAT	408223
rs107008441	snp	A/C	0	0	intron-variant	Usp54	Rn_Celera	15:4145967	GTGACTGGGATGTTC[A/C]GAAGCTCAATAACTC	408223
rs107011771	snp	C/T	0	0	upstream-variant-2KB, intron-variant	Usp54	Rn_Celera	15:4124028	GTCTCTCAGGTGCTT[C/T]CTGAGGGAAGCTATT	408223
rs107047357	snp	A/G	0.375	0.216506	intron-variant	Usp54	Rn_Celera	15:4145975	GATGTTCCGAAGCTC[A/G]ATAACTCATTTGTGC	408223
rs107219327	snp	C/T	0	0	intron-variant	Usp54	Rn_Celera	15:4100987	GAGCAGTCAGTGCTC[C/T]TAACTACTGAGCCAT	408223
rs107255963	snp	A/C	0	0	intron-variant	Usp54	Rn_Celera	15:4168626	TATAATTCTCAATCT[A/C]TTTAGATTCATCAAG	408223
rs107318478	snp	C/T	0	0	intron-variant	Usp54	Rn_Celera	15:4157459	GCTGTCTTATTATTG[C/T]ACTTTTCCTACATAA	408223
rs107378066	snp	A/G	0	0	intron-variant	Usp54	Rn_Celera	15:4126508	GTATATAATGTGTAT[A/G]TATTCTATATACTTT	408223
rs107456321	snp	C/T	0	0	intron-variant	Usp54	Rn_Celera	15:4166346	TTATATTTATATATA[C/T]ATTATATTTTATTAT	408223
rs107483773	snp	C/G	0	0	intron-variant	Usp54	Rn_Celera	15:4173614	AGTGGAGGCCAGTTA[C/G]CTCTCTTTCCCCTTG	408223
rs107556654	snp	C/T	0	0	intron-variant	Usp54	Rn_Celera	15:4119190	TACTGAGATTACAGG[C/T]ATGTGCCACCGTGCC	408223
rs197862580	snp	A/C	0	0	intron-variant	Usp54	Rn_Celera	15:4136887	AAAAAAACAAAAAAA[A/C]CAAACAAACCACAGA	408223

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