DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000570 | rno-miR-331 | 311030 | Stam2 | aagauccuauccGGGUCCCCg | |||||||| | ugugccacuuaaCCCAGGGGa | 2 | 10 | 35 | 55 | [rn4:3:34213098-34213118:-] | 0.7280 | 145 | 7 | -20.86 | -1.1275 |
MIMAT0003152 | rno-miR-22* | 311030 | Stam2 | auuucgaacggugacUUCUUGa | |||||| | ccccucucagucaaaAAGAACc | 2 | 8 | 81 | 102 | [rn4:3:34213051-34213072:-] | 0.7280 | 120 | 6 | -10.34 | -0.4432 |
MIMAT0004720 | rno-miR-30e* | 311030 | Stam2 | cgacauuuguaggcuGACUUUc | |||||| | ccaggggauucuaauCUGAAAu | 2 | 8 | 48 | 69 | [rn4:3:34213084-34213105:-] | 0.7280 | 120 | 6 | -8.28 | -0.1426 |
MIMAT0004722 | rno-miR-30d* | 311030 | Stam2 | cgUCGUUUGUAGACU-GACUUUc | || ::|: ||| | |||||| | ccAGGGGAU-UCUAAUCUGAAAu | 2 | 21 | 48 | 69 | [rn4:3:34213084-34213105:-] | 0.7280 | 122 | 6 | -13.61 | -1.1378 |
MIMAT0000809 | rno-miR-30a* | 311030 | Stam2 | cgacguuuguaggcuGACUUUc | |||||| | ccaggggauucuaauCUGAAAu | 2 | 8 | 48 | 69 | [rn4:3:34213084-34213105:-] | 0.7280 | 120 | 6 | -8.26 | -0.1426 |
MIMAT0004740 | rno-miR-218* | 311030 | Stam2 | gcgccacgaacUGUCUUGGUAc | | |||||||| | cucucagucaaAAAGAACCAUa | 2 | 12 | 84 | 105 | [rn4:3:34213048-34213069:-] | 0.7280 | 147 | 7 | -10.28 | -1.3414 |
MIMAT0005281 | rno-miR-871 | 311030 | Stam2 | acacuggccguGGUUAGACUUau | |:|||||||| | cccaggggauuCUAAUCUGAAau | 3 | 13 | 47 | 69 | [rn4:3:34213084-34213106:-] | 0.7280 | 136 | 0 | -15.75 | -0.1159 |
MIMAT0005329 | rno-miR-674-5p | 311030 | Stam2 | augugguGAGGGUAGAGUCAcg | :|||| ||||||| | uaaaaguUUCCCCUCUCAGUca | 3 | 16 | 72 | 93 | [rn4:3:34213060-34213081:-] | 0.7280 | 143 | 0 | -19.70 | -0.3449 |
MIMAT0012851 | rno-miR-547 | 311030 | Stam2 | gaGUGAAUUUCUUCAUGGUu | || | ||| ||| |||| | cuCAGUCAAA-AAGAACCAu | 2 | 19 | 86 | 104 | [rn4:3:34213049-34213067:-] | 0.7280 | 128 | 0 | -10.75 | -0.1289 |
MIMAT0012853 | rno-miR-761 | 311030 | Stam2 | acacagucaaagugGGACGACg | ||||||| | -agacacaccaggaCCUGCUGa | 2 | 9 | 1 | 21 | [rn4:3:34213132-34213152:-] | 0.7280 | 140 | 7 | -16.81 | -0.7774 |
MIMAT0000600 | rno-miR-129 | 311030 | Stam2 | cguucgggucuggcGUUUUUc | |||||| | uuuccccucucaguCAAAAAg | 2 | 8 | 78 | 98 | [rn4:3:34213055-34213075:-] | 0.7280 | 120 | 6 | -13.59 | -0.1713 |
MIMAT0000840 | rno-miR-134 | 311030 | Stam2 | ggggAGACCAGUUGGUCAGUgu | |:| | :|||||| | aaagUUUCCCCUCUCAGUCAaa | 3 | 19 | 74 | 95 | [rn4:3:34213058-34213079:-] | 0.7280 | 122 | 0 | -21.42 | -0.2833 |
MIMAT0000885 | rno-miR-214 | 311030 | Stam2 | gacggacaGACACGGACGACa | | | ||||||| | agacacacCAGGACCUGCUGa | 2 | 14 | 1 | 21 | [rn4:3:34213132-34213152:-] | 0.7280 | 141 | 7 | -13.80 | -0.7774 |
MIMAT0000888 | rno-miR-218 | 311030 | Stam2 | ugUACCAAUCUAGUUCGUGUu | || || || ||||||| | ccAUAAGUAAAUAAAGCACAa | 2 | 20 | 101 | 121 | [rn4:3:34213032-34213052:-] | 0.7280 | 155 | 7 | -11.47 | -1.3390 |