Stam2
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000570rno-miR-331311030Stam2aagauccuauccGGGUCCCCg |||||||| ugugccacuuaaCCCAGGGGa2103555[rn4:3:34213098-34213118:-]0.72801457-20.86-1.1275
MIMAT0003152rno-miR-22*311030Stam2auuucgaacggugacUUCUUGa |||||| ccccucucagucaaaAAGAACc2881102[rn4:3:34213051-34213072:-]0.72801206-10.34-0.4432
MIMAT0004720rno-miR-30e*311030Stam2cgacauuuguaggcuGACUUUc |||||| ccaggggauucuaauCUGAAAu284869[rn4:3:34213084-34213105:-]0.72801206-8.28-0.1426
MIMAT0004722rno-miR-30d*311030Stam2cgUCGUUUGUAGACU-GACUUUc || ::|: ||| | |||||| ccAGGGGAU-UCUAAUCUGAAAu2214869[rn4:3:34213084-34213105:-]0.72801226-13.61-1.1378
MIMAT0000809rno-miR-30a*311030Stam2cgacguuuguaggcuGACUUUc |||||| ccaggggauucuaauCUGAAAu284869[rn4:3:34213084-34213105:-]0.72801206-8.26-0.1426
MIMAT0004740rno-miR-218*311030Stam2gcgccacgaacUGUCUUGGUAc | |||||||| cucucagucaaAAAGAACCAUa21284105[rn4:3:34213048-34213069:-]0.72801477-10.28-1.3414
MIMAT0005281rno-miR-871311030Stam2acacuggccguGGUUAGACUUau |:|||||||| cccaggggauuCUAAUCUGAAau3134769[rn4:3:34213084-34213106:-]0.72801360-15.75-0.1159
MIMAT0005329rno-miR-674-5p311030Stam2augugguGAGGGUAGAGUCAcg :|||| ||||||| uaaaaguUUCCCCUCUCAGUca3167293[rn4:3:34213060-34213081:-]0.72801430-19.70-0.3449
MIMAT0012851rno-miR-547311030Stam2gaGUGAAUUUCUUCAUGGUu || | ||| ||| |||| cuCAGUCAAA-AAGAACCAu21986104[rn4:3:34213049-34213067:-]0.72801280-10.75-0.1289
MIMAT0012853rno-miR-761311030Stam2acacagucaaagugGGACGACg ||||||| -agacacaccaggaCCUGCUGa29121[rn4:3:34213132-34213152:-]0.72801407-16.81-0.7774
MIMAT0000600rno-miR-129311030Stam2cguucgggucuggcGUUUUUc |||||| uuuccccucucaguCAAAAAg287898[rn4:3:34213055-34213075:-]0.72801206-13.59-0.1713
MIMAT0000840rno-miR-134311030Stam2ggggAGACCAGUUGGUCAGUgu |:| | :|||||| aaagUUUCCCCUCUCAGUCAaa3197495[rn4:3:34213058-34213079:-]0.72801220-21.42-0.2833
MIMAT0000885rno-miR-214311030Stam2gacggacaGACACGGACGACa | | ||||||| agacacacCAGGACCUGCUGa214121[rn4:3:34213132-34213152:-]0.72801417-13.80-0.7774
MIMAT0000888rno-miR-218311030Stam2ugUACCAAUCUAGUUCGUGUu || || || ||||||| ccAUAAGUAAAUAAAGCACAa220101121[rn4:3:34213032-34213052:-]0.72801557-11.47-1.3390
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G056082Stam2Rattus norvegicus311030
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Stam2RAID00978834rno-miR-134-5pmiRNAMIMAT0000840Stam2mRNA311030Prediction0.1828
Stam2RAID00987930rno-miR-218a-2-3pmiRNAMIMAT0004740Stam2mRNA311030Prediction0.1828
Stam2RAID01120029rno-miR-331-3pmiRNAMIMAT0000570Stam2mRNA311030Prediction0.1828
Stam2RAID01548101rno-miR-138-2-3pmiRNAMIMAT0017127Stam2mRNA311030Prediction0.1828
Stam2RAID01945734rno-miR-218a-5pmiRNAMIMAT0000888Stam2mRNA311030Prediction0.2202
Stam2RAID02798171rno-miR-214-3pmiRNAMIMAT0000885Stam2mRNA311030Prediction0.1828
Stam2RAID03848079rno-miR-129-5pmiRNAMIMAT0000600Stam2mRNA311030Prediction0.1828