DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G060873 Ube2m Rattus norvegicus 361509

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ube2m; Ube2m_predicted; rCG_27455 rno-let-7b 155 185 UUGGUGUGUUGG--------AUGAUGGAGU |||||:::|:: |:||:|||| CACCACGUGAUUAUGGUCGGUGCUGCCUCC Ube2m; Ube2m_predicted; rCG_27455 rno-let-7c 151 185 -UUGGU---------AUGUUGG--AUGAUGGAGU :|||| ||: :| |:||:|||| UGACCACCACGUGAUUAUGGUCGGUGCUGCCUCC Ube2m; Ube2m_predicted; rCG_27455 rno-let-7f 162 185 -UUGAUAUGUUAG--AUGAUGGAGU :|:|||: :|| |:||:|||| UGAUUAUG--GUCGGUGCUGCCUCC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-1* 63 86 -CCCAU-GUAUUUCUUCAUACACG ||| || || :||:|||| GGGGGCCCAGGUAG-GGUGUGUGG Ube2m; Ube2m_predicted; rCG_27455 rno-miR-124a 85 109 ACCGU---AAGUGGCGCACGGAAUU ||:| || :|| | ||||||: GGGUAGCCUUGGCC-CCUGCCUUGG Ube2m; Ube2m_predicted; rCG_27455 rno-miR-125b 67 89 AGUGUUCAAUCCCAGAGUCCCU- | ||:| |||||| | |||: GCCCAGG-UAGGGUGUGUGGGGU Ube2m; Ube2m_predicted; rCG_27455 rno-miR-126 159 179 CGUAAUAAUGAGUGCCAUGCU |:| ||||: ||||:| ACGUGAUUAUGGUCGGUGCU- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-129 26 56 -UCGU---UCGGGUCUGG------CGUUUUUC :|: :||||||:| ||||| GGGUUACUGGCCCAGGCAUCCCCUGCAAAU-- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-129* 265 287 UAC-GAAAAACCCCAUU--CCCGAA || || |||||||| |||| UUGACUG--UGGGGUAAGUGGGCA- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-133a 71 94 UGUCGA-CCAACUUCCCC--UGGUU :|: ||| |||| :|| -AGGUAGGGUGUGUGGGGUAGCCU- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-133b 71 94 AUCGA-CCAACUUCCCC--UGGUU :|: ||| |||| :|| AGGUAGGGUGUGUGGGGUAGCCU- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-134 291 315 GGGAGACCAGUUGGUCAG----UGU- ||| |||| ||||| :|| GCCUG-GGUC-ACCAGGCUCAAGCAA Ube2m; Ube2m_predicted; rCG_27455 rno-miR-141 13 33 -GGUAGAAAUGGUCUGUCACAAU- ||||| |:||||: |||| CCCAUCCCUGCCAGG----GUUAC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-15b 160 182 ACAUUUGGUACUA--CACGACGAU || :|::|||:| ||||||| CGU-GAUUAUGGUCGGUGCUGCC- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-185 99 122 CUUGACGGAAA-------GAGAGGU ||||||| |||||| --CCUGCCUUGGCCUUGCCUCUCCU Ube2m; Ube2m_predicted; rCG_27455 rno-miR-189 264 288 UGACU-AUAGUCGAGUCAUCCGUG :||| |:| :| | |||:|||| CUUGACUGUGGGGUAAGUGGGCAA Ube2m; Ube2m_predicted; rCG_27455 rno-miR-207 62 93 -UUCCC---UCC-UCUCGGUC-CUCU-UCG- ::||| ||| ||:|: | |:|: ||| UGGGGGCCCAGGUAGGGUGUGUGGGGUAGCC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-214 215 252 GACGGACAGA-CACGG---------------ACGACA- ||:|||:| | ||| |||||| -GGCUUGUUUAGCGCCCCCCCUCCCGCUGGGUGCUGUC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-222 63 93 -CUCUGGGUCA---UCGGUCUA--CAUCGA |:|:||||| :|: | ||||| GGGGGCCCAGGUAGGGUGUGUGGGGUAGCC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-25 262 291 -AGU-CUGG--CUCUGUUCA--CGUUAC- || |||: |:|::|||| |||||| CUCUUGACUGUGGGGUAAGUGGGCAAUGG Ube2m; Ube2m_predicted; rCG_27455 rno-miR-296 73 101 UGUCCUA-ACUCCCCC------CCGGGA :|||:| || |||| ||||| GUAGGGUGUGUGGGGUAGCCUUGGCCCC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-298 75 106 -CCU-----UCUUGUCGGGA--GGAGACGG- ||: :| :||||: || ||||| AGGGUGUGUGGGGUAGCCUUGGCCCCUGCCU Ube2m; Ube2m_predicted; rCG_27455 rno-miR-29a 151 181 -UUGG-------CUAAAGUCUA-CCACGAU- :||| |||| |:| ||||||: UGACCACCACGUGAUUAU-GGUCGGUGCUGC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-29c 161 181 UGGCUAAAGUUUA-CCACGAU- :|||| ::| ||||||: -GUGAUUAU-GGUCGGUGCUGC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-29c* 151 177 -CUUGUGGUCCUCU----UUAGCCAGU || ||||| | || ::||||| UGACCACCACGUGAUUAUGGUCGGUG- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-300 83 105 CUUCUC-UCGAA--CGGGAACGUAU :|:| ||| |||| ||| -UGGGGUAGCCUUGGCCCCUGCC-- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-31 94 118 GUCGAU-ACGG--UCGUAGAACGGA- :|| |||| :|| ||||||| UGGCCCCUGCCUUGGC--CUUGCCUC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-324-3p 239 285 -GGUCGUCG------UGG---------------ACCCCG-UCACC |::| || ||| |||||: ||||| GCUGGGUGCUGUCCAACCCCCCACUCUUGACUGUGGGGUAAGUGGG Ube2m; Ube2m_predicted; rCG_27455 rno-miR-324-5p 339 365 UGUGGUUACGGGA---UCCCC-UACGC |||||: ||: ||||| |||: CCACCAG-GCUAUUAAAGGGGAAUGUU Ube2m; Ube2m_predicted; rCG_27455 rno-miR-328 273 302 UGCCUU----CCCGU--CUCU--CCCGGUC ||: ||||| |:| |||:|| -GGGGUAAGUGGGCAAUGGGCCUGGGUCAC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-329 62 85 UUUUUCCAA---UCGACCCACACAA ::|| :|: |||||||| --UGGGGGCCCAGGUAGGGUGUGUG Ube2m; Ube2m_predicted; rCG_27455 rno-miR-330 60 90 AGAGACGUCCGGG--------ACACGAAACG- :|| :||||| ||||: |: --AUUGGGGGCCCAGGUAGGGUGUGUGGGGUA Ube2m; Ube2m_predicted; rCG_27455 rno-miR-331 280 308 AAGAUCC--UAUCCGGGUCC------CCG- |:|| ||:||||::|| ||| --GUGGGCAAUGGGCCUGGGUCACCAGGCU Ube2m; Ube2m_predicted; rCG_27455 rno-miR-336 64 90 -UCUGA-UCUAUACCU----UCCCACU :|:| ||:|| || :|||| GGGGCCCAGGUAGGGUGUGUGGGGUA- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-342 61 89 CUGCCCACG---CUAAAG-ACACACUCU- :||| || |:| ||||||:|: -UUGGGGGCCCAGGUAGGGUGUGUGGGGU Ube2m; Ube2m_predicted; rCG_27455 rno-miR-343 60 82 AGACCCGUGUG-CC-UCCCUCU :|||| :| || |||| | AUUGGGGGCCCAGGUAGGGUGU Ube2m; Ube2m_predicted; rCG_27455 rno-miR-344 274 302 UGCCAG---UCCGAAA-CCG-AUCUAGU- ||| :||| ||| |:|:||| -GGGUAAGUGGGCAAUGGGCCUGGGUCAC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-345 259 288 CGUGAC--CUGAU-CCCCAG----UCGU- |||| ||||: ||||| :||| CCACUCUUGACUGUGGGGUAAGUGGGCAA Ube2m; Ube2m_predicted; rCG_27455 rno-miR-349 272 297 UCUCCAAUUCUGUCGU--CCC-GAC- |:|| |||| :||| ||| ||| UGGGG-UAAGUGGGCAAUGGGCCUGG Ube2m; Ube2m_predicted; rCG_27455 rno-miR-34b 1 26 GUUAGUCGAUUAAUGU-----GACGGAU ::|:||| |||||| ||||| -GGUUAGC-AAUUACCCAUCCCUGCCA- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-352 244 267 -AUGAUACGUUGGAUGAUGAGA- |:||:| ||||| | ||||| GUGCUGUCCAACCCCCCACUCUU Ube2m; Ube2m_predicted; rCG_27455 rno-miR-370 299 339 UUGGUCCAA--------GGUGGGGU--------CGUCCG- |||||| |||||||| | |||: CACCAGGCUCAAGCAACCCACCCCACCACCACUGGAGGUC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-409-5p 73 95 -GUUUCA-ACGAGCCCAUUGGA- :|::|| ||: |||||:||| GUAGGGUGUGUG-GGGUAGCCUU Ube2m; Ube2m_predicted; rCG_27455 rno-miR-421 49 71 GUUGUUUGUAAAUUA-CUCCGG- :||||:||||| |:|||| -UGCAAAUAUUUAUUGGGGGCCC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-424 153 182 AGGUUUUGUACUUA--------ACGACGAC ||| ||:||| |||||| ACCACCACGUGAUUAUGGUCGGUGCUGCC- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-497 158 182 AUGU-UUGGUGUCA--CACGACGAC ||: :|::|::|| ||||||| CACGUGAUUAUGGUCGGUGCUGCC- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-503 171 197 -GUCAUGACA-AGGGC----GACGAU |:||:||| |||| ||||| UCGGUGCUGCCUCCCCCGACCUGCUC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-540 22 44 -GGUCCUA---GCUGGAGACUGGA |||||:| :|:|| | |:| GCCAGGGUUACUGGCC-CAGGCA- Ube2m; Ube2m_predicted; rCG_27455 rno-miR-543 331 366 -UCUUCAC-GUGG------------CGCUUACAAA :||:|| |||| | ||||||| UGGAGGUCCCACCAGGCUAUUAAAGGGGAAUGUUA Ube2m; Ube2m_predicted; rCG_27455 rno-miR-92 288 316 GUCCGG-CCCU---GUUCA----CGUUAU :|||| ||| ||:| |||| UGGGCCUGGGUCACCAGGCUCAAGCAAC- Ube2m; Ube2m_predicted; rCG_27455 rno-let-7c 155 184 uUGGU------AUGUUGG--AUGAUGGAGu |||| ||::::| |:||:|||| cACCACGTGATTATGGTCGGTGCTGCCTCc Ube2m; Ube2m_predicted; rCG_27455 rno-let-7f 161 184 uugauAUGUUAG--AUGAUGGAGu ||:::|| |:||:|||| gtgatTATGGTCGGTGCTGCCTCc Ube2m; Ube2m_predicted; rCG_27455 rno-miR-1* 65 85 CCCAUGUAUUUCUUCAUACACg ||| || : || :||:|||| GGGCCCAGGTAG-GGTGTGTGg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-124a 88 108 ACCGUAAGUGGCGCACGGAAuu | || || :|| | |||||| TAGCCTTGGCC-CCTGCCTTgg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-125b 54 75 aguguucAAUCCCAGAGUCCcu ||:||| | |||| atatttaTTGGGGGCCCAGGta Ube2m; Ube2m_predicted; rCG_27455 rno-miR-126 159 179 cGUAAUAAUGAGUGCCAUGcu |:| ||||: ||||:| aCGTGATTATGGTCGGTGCtg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-129 30 57 ucGUUCGGGUCU------GGCGUUUUUc | :||||||: |:||||| | taCTGGCCCAGGCATCCCCTGCAAATAt Ube2m; Ube2m_predicted; rCG_27455 rno-miR-129* 261 287 uacGAA---AAACCCCAUU--CCCGaa ||| | |||||||| |||| actCTTGACTGTGGGGTAAGTGGGCaa Ube2m; Ube2m_predicted; rCG_27455 rno-miR-133a 53 72 ugucgaccAACUUCCCCUGGUu ||| |||| ||| aatatttaTTG--GGGGCCCAg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-133b 54 72 aucgaccAACUUCCCCUGGUu ||| |||| ||| atatttaTTG--GGGGCCCAg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-141 14 31 GGUAGAAAUGGUCUGUCACAAU ||||| || | ||| |||| CCATC----CCTGCCAGGGTTA Ube2m; Ube2m_predicted; rCG_27455 rno-miR-15b 160 182 aCAUUUGGUACUA--CACGACGau || :|::|||:| ||||||| cGT-GATTATGGTCGGTGCTGCct Ube2m; Ube2m_predicted; rCG_27455 rno-miR-185 103 121 cuugaCGGAA-AGAGAGGu ||||| |||||| ccttgGCCTTGCCTCTCCt Ube2m; Ube2m_predicted; rCG_27455 rno-miR-207 70 91 uUCCCUCCUCUCGGUCCUCUUCG ||| ||| | |: ||:| ||| cAGGTAGG-GTGTGTGGGGTAGC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-214 214 243 gaCGGACAGA-CAC--------GGACGACa ||:|||:| | | || |||| tgGCTTGTTTAGCGCCCCCCCTCCCGCTGg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-222 64 92 CUCUGGGU-CAU----CGGUCUACAUCGa |:|:|||| ||| |: |: ||||| GGGGCCCAGGTAGGGTGTGTGGGGTAGCc Ube2m; Ube2m_predicted; rCG_27455 rno-miR-25 264 289 aguCUG--GCUCUGUU--CACGUUAC ||| :|:|::|| | |||||| cttGACTGTGGGGTAAGTGGGCAATG Ube2m; Ube2m_predicted; rCG_27455 rno-miR-296 51 71 uguccUAACUCCCCCCCGGGa ||| | |||||||| caaatATTTATTGGGGGCCCa Ube2m; Ube2m_predicted; rCG_27455 rno-miR-298 81 104 cCUUCUUGUCGGGA--GGAGACGG | :|:::||||:| || ||||| tGTGGGGTAGCCTTGGCCCCTGCC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-29a 158 179 uUG-GCUAAAGUCUACCACGAu || :|||| ::| |||||| cACGTGATTATGGTCGGTGCTg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-29c 159 179 UG-GCUAAAGUUUACCACGAu || :|||| ::: |||||| ACGTGATTATGGTCGGTGCTg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-29c* 152 177 CUUGUGGUCCUCU----UUAGCCAgu || ||||| | || ::||||| GACCACCACGTGATTATGGTCGGTgc Ube2m; Ube2m_predicted; rCG_27455 rno-miR-300 96 117 cuucucucGAACGGGAACGUAu |||| |||||| | gcccctgcCTTGGCCTTGCCTc Ube2m; Ube2m_predicted; rCG_27455 rno-miR-31 95 116 gucgauACGG--UCGUAGAACGGA |||| :|| ||||||| ggccccTGCCTTGGC--CTTGCCT Ube2m; Ube2m_predicted; rCG_27455 rno-miR-324-3p 268 290 gGUCGUCGUGGAC-CCCGUCACC | |::| :: | ||||| ||| aCTGTGGGGTAAGTGGGCAATGG Ube2m; Ube2m_predicted; rCG_27455 rno-miR-328 268 295 UGCCUUCCCGU---CUC---UCCCGGuc || | :|||:| |:| ||||| ACTGTGGGGTAAGTGGGCAATGGGCCtg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-329 67 84 uuuuUCCAAUCGACCCACACAa ||| || |||||||| gcccAGG-TA---GGGTGTGTg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-330 87 108 agagacguCCGGGACACGAAACg ||||| ||| ||| gtagccttGGCCC-CTGCCTTGg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-331 278 299 aagAUCC--UAUCCGGGUCCCcg |:|| ||:|| || ||| aagTGGGCAATGGG-CCTGGGtc Ube2m; Ube2m_predicted; rCG_27455 rno-miR-336 61 81 ucugaucuauaccuUCCCACu |||||| ttgggggcccaggtAGGGTGt Ube2m; Ube2m_predicted; rCG_27455 rno-miR-342 60 87 cugCCCACG---CUA-AAGACACACUCu ||| || |:| ||||||:| attGGGGGCCCAGGTAGGGTGTGTGGGg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-343 62 81 agaCCCGUGUGCCUCCCUCu |||| || | |||| | tggGGGCCCAGGTAGGGTGt Ube2m; Ube2m_predicted; rCG_27455 rno-miR-344 273 300 ugCCAGU---CCGAAACC--GAUCUAGU ||| | ||| ||| ||:|:||| ggGGTAAGTGGGCAATGGGCCTGGGTCA Ube2m; Ube2m_predicted; rCG_27455 rno-miR-345 284 303 CGUGACCUGAUCCCCAGUCGU ||| |||:| |||||| || GCAATGGGC-CTGGGTCACCA Ube2m; Ube2m_predicted; rCG_27455 rno-miR-345 261 282 cGUGACCUGAU-CCCCAGUCgu | || ||||: ||||| || aCTCTTGACTGTGGGGTAAGtg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-34b 1 26 guuAGUCGAUUAAU-----GUGACGGau |:||| ||||| | ||||| -ggTTAGC-AATTACCCATCCCTGCCag Ube2m; Ube2m_predicted; rCG_27455 rno-miR-352 245 265 AUGAUACGUUGGAUGAUGAGA |:||:| ||||| | ||||| TGCTGTCCAACCCCCCACTCT Ube2m; Ube2m_predicted; rCG_27455 rno-miR-370 322 347 uUGGUCCAAGGUG-------GGGUCGUCCG |||| |||| |||| ||||| cACCA----CCACTGGAGGTCCCACCAGGC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-370 284 306 uugguCCAAGGUGGGGUCGUCCG || |:: :|| ||||| gcaatGGGCCTGGGTCACCAGGC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-409-3p 294 318 cCCCAAGUGG--C----UCGUUGuaa ||| ||||| | |||||| tGGG-TCACCAGGCTCAAGCAACcca Ube2m; Ube2m_predicted; rCG_27455 rno-miR-421 48 69 GUUGUUUGUAAAUUA--CUCCGG | :||||:|||| || |:|||| CTGCAAATATTT-ATTGGGGGCC Ube2m; Ube2m_predicted; rCG_27455 rno-miR-424 153 182 aGGUUUUGUACU--UA------ACGACGac ||| ||:||| || |||||| aCCACCACGTGATTATGGTCGGTGCTGCct Ube2m; Ube2m_predicted; rCG_27455 rno-miR-497 158 182 aUGU-UUGGUGUCA--CACGACGac ||: :|::|::|| ||||||| cACGTGATTATGGTCGGTGCTGCct Ube2m; Ube2m_predicted; rCG_27455 rno-miR-503 172 196 GUCAUGAC--A-AGGGC--GACGAu |:||:||| | |||| ||||| CGGTGCTGCCTCCCCCGACCTGCTc Ube2m; Ube2m_predicted; rCG_27455 rno-miR-540 23 38 GGUCCUAGCUGGAGACUGGa |||||:|: | |||:|| CCAGGGTT-A---CTGGCCc Ube2m; Ube2m_predicted; rCG_27455 rno-miR-543 332 365 uCUUCA-CGUGG--CG----------CUUACAAa ||:|| |||| || ||||||| gGAGGTCCCACCAGGCTATTAAAGGGGAATGTTa Ube2m; Ube2m_predicted; rCG_27455 rno-miR-92 267 289 guccggCCCUGUU--CACGUUAu |||::|| | ||||| gactgtGGGGTAAGTGGGCAATg Ube2m; Ube2m_predicted; rCG_27455 rno-miR-296 64 71 U--------GUCCUAACUCC--------------CCCCCGGGA |||| |||||||| UUACUGGCCCAGGCAUCCCCUGCAAAUAUUUAUUGGGGGCCCA Ube2m; Ube2m_predicted; rCG_27455 rno-miR-329 77 84 UU-------------------UUUCCAA--UCGACCCACACAA :::|| :|: |||||||| CAUCCCCUGCAAAUAUUUAUUGGGGGCCCAGGUAGGGUGUGUG Ube2m; Ube2m_predicted; rCG_27455 rno-miR-543 358 365 ---------UCUUCAC-GUGG------------CGCUUACAAA :||:|| |||| | ||||||| ACCACCACUGGAGGUCCCACCAGGCUAUUAAAGGGGAAUGUUA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ube2m RAID00433705 rno-miR-221-5p miRNA MIMAT0017163 Ube2m mRNA 361509 Prediction 0.1828 Ube2m RAID00659596 rno-miR-664-3p miRNA MIMAT0003382 Ube2m mRNA 361509 Prediction 0.1828 Ube2m RAID00740413 rno-miR-3065-3p miRNA MIMAT0017840 Ube2m mRNA 361509 Prediction 0.1828 Ube2m RAID01635777 rno-miR-543-3p miRNA MIMAT0003175 Ube2m mRNA 361509 Prediction 0.1828 Ube2m RAID01690766 rno-miR-6318 miRNA MIMAT0025055 Ube2m mRNA 361509 Prediction 0.1828 Ube2m RAID02505114 rno-miR-323-5p miRNA MIMAT0004637 Ube2m mRNA 361509 Prediction 0.1828 Ube2m RAID02715055 rno-miR-6332 miRNA MIMAT0025073 Ube2m mRNA 361509 Prediction 0.1828 Ube2m RAID03413397 rno-miR-802-5p miRNA MIMAT0012840 Ube2m mRNA 361509 Prediction 0.1828