DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000547 rno-miR-322* 360950 Wdr1 acaACGUCGCGAAGUACAAa ||:| : : ||||||| ugcUGUAAUUUGUCAUGUUu 2 18 763 782 [rn4:14:77524214-77524233:+] 0.5923 149 7 -11.18 -0.9800 MIMAT0000547 rno-miR-322* 360950 Wdr1 acaacgucgcgaAGUACAAa ||||||| uuccucuguaagUCAUGUUa 2 9 445 464 [rn4:14:77523896-77523915:+] 0.4612 140 7 -7.76 -0.2427 MIMAT0000547 rno-miR-322* 360950 Wdr1 acAACGUCGCGAAG-UACAAa || | |||||| ||||| gaUUACCACGCUUCAAUGUUu 2 19 688 708 [rn4:14:77524139-77524159:+] 0.5923 130 0 -15.75 -0.3036 MIMAT0004645 rno-miR-148b-5p 360950 Wdr1 ggaCUCACAUAUUGUCUUGAAg ||| | : ||||||| gugGAGCGAGCCUAAGAACUUa 2 20 227 248 [rn4:14:77523678-77523699:+] 0.5982 143 7 -12.12 -0.5160 MIMAT0000613 rno-miR-151 360950 Wdr1 ugAUCUGACACUCGA-GGAGCu |||| || | || ||||| acUAGA--GUUAACUGCCUCGg 2 20 33 52 [rn4:14:77523484-77523503:+] 0.6991 120 0 -17.75 -0.2748 MIMAT0004708 rno-miR-9* 360950 Wdr1 ugaaagccaauagaUCGAAAUa ||||||| cgcguccuucugagAGCUUUAg 2 9 158 179 [rn4:14:77523609-77523630:+] 0.6090 140 7 -10.14 -0.2732 MIMAT0004708 rno-miR-9* 360950 Wdr1 ugaaagccaauagauCGAAAUa |||||| gaaaacacuuugaacGCUUUAa 2 8 911 932 [rn4:14:77524362-77524383:+] 0.6503 120 6 -4.17 -0.1262 MIMAT0004709 rno-miR-10a-3p 360950 Wdr1 auaaggggaucuaugCUUAAAc |||||| agaauggaaucaugaGAAUUUu 2 8 550 571 [rn4:14:77524001-77524022:+] 0.5923 120 6 -4.01 -0.1048 MIMAT0004711 rno-miR-21* 360950 Wdr1 cugUCGGGUAGCUGACGACAac || : || ::|||||| acaAGAUGAU--GUUGCUGUaa 3 20 751 770 [rn4:14:77524202-77524221:+] 0.5923 124 0 -10.88 -0.1339 MIMAT0004715 rno-miR-27a* 360950 Wdr1 acgaGUGUUCGUCGAU-UCGGGa | :||| | :|| ||||| cgagCCUAAGAACUUACAGCCCa 2 19 233 255 [rn4:14:77523684-77523706:+] 0.5982 122 0 -13.41 -0.3726 MIMAT0004720 rno-miR-30e* 360950 Wdr1 cgacauuugUAGGCUGACUUUc ||: ||||||:| uuaagaguaAUUAGACUGAGAa 2 14 929 950 [rn4:14:77524380-77524401:+] 0.6503 137 0 -11.92 -0.1343 MIMAT0004722 rno-miR-30d* 360950 Wdr1 cgUCGUUUGUAGACUGACUUUc || |: ||: ||||||:| uaAG-AGUAAUUAGACUGAGAa 2 21 930 950 [rn4:14:77524381-77524401:+] 0.6503 138 0 -11.76 -0.1343 MIMAT0000809 rno-miR-30a* 360950 Wdr1 cgacguuugUAGGCUGACUUUc ||: ||||||:| uuaagaguaAUUAGACUGAGAa 2 14 929 950 [rn4:14:77524380-77524401:+] 0.6503 137 0 -11.41 -0.1343 MIMAT0000813 rno-miR-34b 360950 Wdr1 guUAGUC---GA--UUAAUGUGACGGAu ||||| || |:||| ||||||| gaAUCAGGGACUAGAGUUA-ACUGCCUc 2 22 24 50 [rn4:14:77523475-77523501:+] 0.6991 157 7 -20.01 -0.7882 MIMAT0004727 rno-miR-106b* 360950 Wdr1 cgucguucauggguGUCACGcc |||||| uuuuuuuucuuuuuCAGUGCag 3 9 788 809 [rn4:14:77524239-77524260:+] 0.5923 120 0 -11.80 -0.2437 MIMAT0000831 rno-miR-126* 360950 Wdr1 gcgcaugguuuucaUUAUUAc |||||| uaauuagacugagaAAUAAUu 2 8 936 956 [rn4:14:77524387-77524407:+] 0.6503 120 6 -4.03 -0.1292 MIMAT0000897 rno-miR-292-3p 360950 Wdr1 ugUGAGUUUUGGACCGC-CGUGAa || :|||: ||| ||||| acACAAGAAAUAAAGCGAGCACUa 2 22 195 218 [rn4:14:77523646-77523669:+] 0.6036 121 0 -18.52 -0.8410 MIMAT0004743 rno-miR-300-5p 360950 Wdr1 uguuuccuauuGGAGAGAAGUu |||||||||| gcgaguacccuCCUCUCUUCAg 2 12 120 141 [rn4:14:77523571-77523592:+] 0.6090 155 7 -22.38 -0.1035 MIMAT0003177 rno-miR-541 360950 Wdr1 ucAC-ACUGGUUGUAGUCUUAGGGAa || ||:|::| | | ||||||| aaUGUUGGCUGAGA--ACAAUCCCUc 2 24 874 897 [rn4:14:77524325-77524348:+] 0.6213 155 7 -15.84 -0.2223 MIMAT0005286 rno-miR-878 360950 Wdr1 agauggGUCAUACCACAGUACg | ||| ||||||| auguugCUGUAAUUUGUCAUGu 2 17 759 780 [rn4:14:77524210-77524231:+] 0.5923 148 7 -13.35 -1.1745 MIMAT0005329 rno-miR-674-5p 360950 Wdr1 augugguGAGGGUAGAGUCACg :|:|: |:|||||| ccuuuuuUUUCUUUUUCAGUGc 2 16 786 807 [rn4:14:77524237-77524258:+] 0.5923 139 6 -17.55 -0.1380 MIMAT0012824 rno-miR-513 360950 Wdr1 uacuuucuGUGGAA---GAACACUu | |||| ||||||| caaucccuCCCCUUGCACUUGUGAa 2 15 889 913 [rn4:14:77524340-77524364:+] 0.6503 145 7 -13.58 -1.0286 MIMAT0012831 rno-miR-544 360950 Wdr1 cucGAACGAUUUUUACGUCUUa ||| :| |:||||||| uuuCUUUUU--CAGUGCAGAAa 2 20 793 812 [rn4:14:77524244-77524263:+] 0.5923 148 7 -11.61 -1.1040 MIMAT0012836 rno-miR-628 360950 Wdr1 ggaGA-GCAUUUAUACAGUCGUa || :| |:| |||||||| ccgCUGUGCAGAGCUGUCAGCAu 2 20 403 425 [rn4:14:77523854-77523876:+] 0.4505 154 7 -17.91 -0.1109 MIMAT0012846 rno-miR-201 360950 Wdr1 uucuuguuacggaaUGACUCa |||||| uuaagaguaauuagACUGAGa 2 8 929 949 [rn4:14:77524380-77524400:+] 0.6503 120 6 -15.83 -0.5704 MIMAT0000552 rno-miR-301a 360950 Wdr1 cgaaacUGUUA-UGA---UAACGUGAc ||||| || ||||||| cugagaACAAUCCCUCCCCUUGCACUu 2 18 882 908 [rn4:14:77524333-77524359:+] 0.6503 143 7 -10.78 -0.3611 MIMAT0000575 rno-miR-335 360950 Wdr1 ugUAAAAAGCAAUAACGAGAACu ||| : | || |||||| uaAUUAAAUAUCUUUUCUCUUGa 2 22 952 974 [rn4:14:77524403-77524425:+] 0.6503 121 6 -10.53 -0.2610 MIMAT0000788 rno-miR-19b 360950 Wdr1 agucaaaaCGUACCUAAACGUGu |:| :||||||| uuuagacaGUAACAGUUUGCACa 2 16 175 197 [rn4:14:77523626-77523648:+] 0.6090 143 7 -14.76 -0.8385 MIMAT0000789 rno-miR-19a 360950 Wdr1 agUC-AAAAC-GU-AU--CUAAACGUGu || ||| | || || :||||||| agAGCUUUAGACAGUAACAGUUUGCACa 2 22 170 197 [rn4:14:77523621-77523648:+] 0.6090 145 7 -14.76 -0.8385 MIMAT0000836 rno-miR-130a 360950 Wdr1 uacgggaaaauuGUAACGUGAc | ||||||| aacaaucccuccCCUUGCACUu 2 11 887 908 [rn4:14:77524338-77524359:+] 0.6503 142 7 -13.89 -0.3640 MIMAT0000837 rno-miR-130b 360950 Wdr1 uacGGGAAAGUAGUAACGUGAc :|| | | | ||||||| caaUCCCUCC--CCUUGCACUu 2 20 889 908 [rn4:14:77524340-77524359:+] 0.6503 144 7 -14.47 -0.3582 MIMAT0000838 rno-miR-132 360950 Wdr1 gcuggUACCGACAUCUGACAAu | | | | ||||||| uuuuaACGUAUCUUGACUGUUg 2 18 578 599 [rn4:14:77524029-77524050:+] 0.5923 145 7 -13.65 -0.8140 MIMAT0000872 rno-miR-199a-5p 360950 Wdr1 cuUGUCCAUCAGACUU-GUGACCc :|: || ||| ||| |||||| uuGCGUGU-GUCGGAAUCACUGGu 2 22 850 872 [rn4:14:77524301-77524323:+] 0.5923 131 6 -18.85 -0.6880 MIMAT0000883 rno-miR-212 360950 Wdr1 accgGCACUGACCUCUGACAAu ||| || ||||||| uuaaCGUAUCU--UGACUGUUg 2 19 580 599 [rn4:14:77524031-77524050:+] 0.5923 143 7 -16.64 -0.8104 MIMAT0001628 rno-miR-433 360950 Wdr1 uguggcuccucgggUAGUACUa ||||||| uuuuuaagaauggaAUCAUGAg 2 9 544 565 [rn4:14:77523995-77524016:+] 0.5923 140 7 -9.51 -0.8849 MIMAT0003193 rno-miR-494 360950 Wdr1 uccAAAGG-GC--ACAUACAAAGu || || || | ||||||| ugaUUACCACGCUUCAAUGUUUCc 2 19 687 710 [rn4:14:77524138-77524161:+] 0.5923 144 7 -10.80 -0.3604 MIMAT0005304 rno-miR-301b 360950 Wdr1 cgaaacuguuAUGGUAACGUGAc | || ||||||| gaacaaucccUCCCCUUGCACUu 2 14 886 908 [rn4:14:77524337-77524359:+] 0.6503 149 7 -13.59 -0.3611 MIMAT0005314 rno-miR-425 360950 Wdr1 aguugcccucacuagcACAGUAa |||||| ugauguugcuguaauuUGUCAUg 2 8 757 779 [rn4:14:77524208-77524230:+] 0.5923 120 6 -8.10 -0.1175 MIMAT0005339 rno-miR-873 360950 Wdr1 uccuCUGAGUGUUCAAGGACg | || | ||||||| uguuGUCUGUCUUGUUCCUGa 2 18 595 615 [rn4:14:77524046-77524066:+] 0.5923 145 7 -13.83 -0.6349

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G054658 Wdr1 Rattus norvegicus 360950

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Wdr1 RAID00038753 rno-miR-199a-5p miRNA MIMAT0000872 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID00131245 rno-miR-425-5p miRNA MIMAT0005314 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID00390547 rno-miR-130a-3p miRNA MIMAT0000836 Wdr1 mRNA 360950 Prediction 0.2202 Wdr1 RAID00563617 rno-miR-301a-3p miRNA MIMAT0000552 Wdr1 mRNA 360950 Prediction 0.2202 Wdr1 RAID00594655 rno-miR-9a-3p miRNA MIMAT0004708 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID00664452 rno-miR-191a-3p miRNA MIMAT0017146 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID00706407 rno-miR-433-3p miRNA MIMAT0001628 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID00762716 rno-miR-130b-3p miRNA MIMAT0000837 Wdr1 mRNA 360950 Prediction 0.2202 Wdr1 RAID00969575 rno-miR-335 miRNA MIMAT0000575 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID01040516 rno-miR-3590-3p miRNA MIMAT0017890 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID01188607 rno-miR-19a-3p miRNA MIMAT0000789 Wdr1 mRNA 360950 Prediction 0.2381 Wdr1 RAID01314960 rno-miR-873-5p miRNA MIMAT0005339 Wdr1 mRNA 360950 Prediction 0.2202 Wdr1 RAID01536706 rno-miR-206-3p miRNA MIMAT0000879 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID01711304 rno-miR-132-3p miRNA MIMAT0000838 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID01888592 rno-miR-3588 miRNA MIMAT0017887 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID02050045 rno-miR-301b-3p miRNA MIMAT0005304 Wdr1 mRNA 360950 Prediction 0.2202 Wdr1 RAID02451350 rno-miR-1-3p miRNA MIMAT0003125 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID02574646 rno-miR-19b-3p miRNA MIMAT0000788 Wdr1 mRNA 360950 Prediction 0.2381 Wdr1 RAID02765578 rno-miR-322-3p miRNA MIMAT0000547 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID03054741 rno-miR-17-2-3p miRNA MIMAT0017295 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID03288869 rno-miR-291b miRNA MIMAT0017822 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID03490451 rno-miR-544-3p miRNA MIMAT0012831 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID03579191 rno-miR-212-3p miRNA MIMAT0000883 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID03876266 rno-miR-3559-5p miRNA MIMAT0017827 Wdr1 mRNA 360950 Prediction 0.1828 Wdr1 RAID03906233 rno-miR-494-3p miRNA MIMAT0003193 Wdr1 mRNA 360950 Prediction 0.1828