DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004637 | rno-miR-323* | 366381 | Cdc26 | cgcUUGCG-CGGUGCC-UGGUGGa | ||: | | |||| |||||| | uaaAAUUCAGGGACGGAACCACCa | 2 | 20 | 788 | 811 | [rn4:5:79390269-79390292:-] | 0.5388 | 122 | 6 | -21.06 | -0.1952 |
MIMAT0000577 | rno-miR-337 | 366381 | Cdc26 | uuuccGUAGUAUAUCCU-CGACUu | || || |:||| ||||| | cagccCAGCACUUGGGAUGCUGAa | 2 | 19 | 474 | 497 | [rn4:5:79390583-79390606:-] | 0.5124 | 126 | 0 | -17.18 | -0.1895 |
MIMAT0000604 | rno-miR-350 | 366381 | Cdc26 | cacuUUCACAUACCCG--AAACACUu | |:| | ||| : ||||||| | acccAGGAUUUUGGAUAGUUUGUGAg | 2 | 21 | 870 | 895 | [rn4:5:79390185-79390210:-] | 0.5388 | 147 | 7 | -12.20 | -0.3748 |
MIMAT0004710 | rno-miR-17-3p | 366381 | Cdc26 | gguguucacggaagUGACGUCa | ||||||| | uccuggaaaauuggACUGCAGa | 2 | 9 | 192 | 213 | [rn4:5:79390867-79390888:-] | 0.5674 | 140 | 7 | -14.37 | -0.6741 |
MIMAT0004711 | rno-miR-21* | 366381 | Cdc26 | cugucgggUAGCUGACGACAAc | ||: |:||||||| | ugcaugaaAUU-AUUGCUGUUc | 2 | 15 | 133 | 153 | [rn4:5:79390927-79390947:-] | 0.5674 | 148 | 7 | -12.65 | -1.0055 |
MIMAT0004717 | rno-miR-29b-2* | 366381 | Cdc26 | gaUUCGGUGGUACACUUUGGUc | |||||| | ||||||| | aaAAGCCAAAA---GAAACCAa | 2 | 21 | 563 | 581 | [rn4:5:79390499-79390517:-] | 0.5028 | 152 | 7 | -16.22 | -1.0925 |
MIMAT0003162 | rno-miR-1* | 366381 | Cdc26 | ccCAUGUAUUUCU-UCA-UACACg | ||| | | ||| :|| ||||| | agGUAGAGACAGAGGGUGAUGUGu | 2 | 21 | 910 | 933 | [rn4:5:79390147-79390170:-] | 0.5159 | 127 | 0 | -18.86 | -0.1088 |
MIMAT0003175 | rno-miR-543* | 366381 | Cdc26 | ucuucacguggcgCUUACAAa | ||||||| | uugggacucuuaaGAAUGUUu | 2 | 9 | 708 | 728 | [rn4:5:79390352-79390372:-] | 0.5001 | 140 | 7 | -9.91 | -0.4464 |
MIMAT0003175 | rno-miR-543* | 366381 | Cdc26 | ucUUCACGUGGCG-CUUACAaa | || |::: | |||||| | gcAAAACCGUUUCAGAAUGUca | 3 | 20 | 538 | 559 | [rn4:5:79390521-79390542:-] | 0.5089 | 122 | 0 | -11.18 | -0.1005 |
MIMAT0003204 | rno-miR-409-5p | 366381 | Cdc26 | guuucaacgaGCCCAUUGGa | | ||||||| | uuagcucugaCAGGUAACCg | 2 | 11 | 299 | 318 | [rn4:5:79390762-79390781:-] | 0.5364 | 142 | 7 | -15.13 | -0.2395 |
MIMAT0003212 | rno-miR-20b-3p | 366381 | Cdc26 | ggucuucacgAGUGUGACGUCa | |:: ||||||| | uccuggaaaaUUGGACUGCAGa | 2 | 13 | 192 | 213 | [rn4:5:79390867-79390888:-] | 0.5674 | 144 | 7 | -16.52 | -0.6741 |
MIMAT0005280 | rno-miR-743b | 366381 | Cdc26 | agauaagucauaccACAGAAAg | ||||||| | gacgccauucuccuUGUCUUUc | 2 | 9 | 327 | 348 | [rn4:5:79390732-79390753:-] | 0.5364 | 140 | 7 | -11.60 | -0.3430 |
MIMAT0005290 | rno-miR-883 | 366381 | Cdc26 | uaUGACUCUCUACAACGUCAAu | || ||| |||||||| | agACCCAGAACACUUGCAGUUg | 2 | 21 | 361 | 382 | [rn4:5:79390698-79390719:-] | 0.5364 | 152 | 7 | -13.93 | -0.3710 |
MIMAT0005336 | rno-miR-760-5p | 366381 | Cdc26 | gcccGAGACCACCGGAC-UCCCc | :||| || |||| |||| | uguuUUCU-GUCUCCUGCAGGGa | 2 | 19 | 100 | 121 | [rn4:5:79390959-79390980:-] | 0.5674 | 120 | 0 | -18.72 | -0.3121 |
MIMAT0012831 | rno-miR-544 | 366381 | Cdc26 | cucgaacgAUUUUUACGUCUUa | | ::| ||||||| | cuggaaaaUUGGACUGCAGAAa | 2 | 15 | 194 | 215 | [rn4:5:79390865-79390886:-] | 0.5674 | 146 | 7 | -10.10 | -0.7611 |
MIMAT0012843 | rno-miR-876 | 366381 | Cdc26 | accacUAAGUGUCUCUUU-AGGu | | |: || ||||| ||| | aaucaAGUUUCAAAGAAACUCCu | 2 | 18 | 835 | 857 | [rn4:5:79390223-79390245:-] | 0.5388 | 121 | 0 | -9.56 | -0.3757 |
MIMAT0000553 | rno-miR-324-5p | 366381 | Cdc26 | ugUGGUUACGGGAUCCCCUACGc | :|| | || || ||||||| | caGCCCA-GCACU-UGGGAUGCu | 2 | 22 | 474 | 494 | [rn4:5:79390586-79390606:-] | 0.5124 | 149 | 7 | -18.87 | -0.1780 |
MIMAT0000600 | rno-miR-129 | 366381 | Cdc26 | cguucGGGUCUGGC-GUUUUUc | ::|||| :| |||||| | accguUUCAGAAUGUCAAAAAa | 2 | 17 | 543 | 564 | [rn4:5:79390516-79390537:-] | 0.5054 | 124 | 6 | -11.82 | -0.8200 |
MIMAT0000608 | rno-miR-351 | 366381 | Cdc26 | aguccgaguuucCCGAGGA-GUCCCu | | ||||| ||||| | agcauguuuucuGUCUCCUGCAGGGa | 2 | 14 | 96 | 121 | [rn4:5:79390959-79390984:-] | 0.5674 | 121 | 0 | -23.38 | -0.3254 |
MIMAT0000788 | rno-miR-19b | 366381 | Cdc26 | aguCAAAACGUACCUAAACGUGu | | | || || | ||||||| | gcuGCUCUGGAUAGUUUUGCACc | 2 | 21 | 748 | 770 | [rn4:5:79390310-79390332:-] | 0.5104 | 160 | 7 | -13.62 | -0.3833 |
MIMAT0000788 | rno-miR-19b | 366381 | Cdc26 | agucAAAACGUACCUAAACGUGu | || | ||| ||||||| | acucUUAAGAAUG--UUUGCACa | 2 | 20 | 713 | 733 | [rn4:5:79390347-79390367:-] | 0.5001 | 148 | 7 | -10.56 | -0.4598 |
MIMAT0000789 | rno-miR-19a | 366381 | Cdc26 | aguCAAAACGUAUCUAAACGUGu | | | || |||| ||||||| | gcuGCUCUGGAUAGUUUUGCACc | 2 | 21 | 748 | 770 | [rn4:5:79390310-79390332:-] | 0.5104 | 168 | 7 | -14.64 | -0.3833 |
MIMAT0000789 | rno-miR-19a | 366381 | Cdc26 | agUCAAAACGUAUCUAAACGUGu | | | || : | :||||||| | ggACUCUUAAGAAUGUUUGCACa | 2 | 22 | 711 | 733 | [rn4:5:79390347-79390369:-] | 0.5001 | 149 | 7 | -10.71 | -0.4858 |
MIMAT0000844 | rno-miR-138 | 366381 | Cdc26 | gccGGACUAAGUGUU-GUGGUCGa | :| |: |: || ||||||| | aauUCAGGGACGGAACCACCAGCu | 2 | 21 | 791 | 814 | [rn4:5:79390266-79390289:-] | 0.5388 | 147 | 7 | -20.62 | -0.1831 |
MIMAT0000872 | rno-miR-199a-5p | 366381 | Cdc26 | cuuguCCAUCAGACUUGU-GACCc | || || | ||||| |||| | gcuguGGAAGCCAGAACAUCUGGa | 2 | 19 | 812 | 835 | [rn4:5:79390245-79390268:-] | 0.5388 | 130 | 0 | -14.80 | -0.8994 |
MIMAT0003117 | rno-miR-361 | 366381 | Cdc26 | cauggggaccucuAAGACUAUu | |||||||| | ugcuguucaaccuUUCUGAUAg | 2 | 10 | 146 | 167 | [rn4:5:79390913-79390934:-] | 0.5674 | 145 | 7 | -12.82 | -0.2956 |
MIMAT0003117 | rno-miR-361 | 366381 | Cdc26 | caUGGG--GAC-CUCUA--AGA-CUAUu | |||| ||| ||| | ||| |||| | ggACCCAUCUGAGAGCUGCUCUGGAUAg | 2 | 21 | 734 | 761 | [rn4:5:79390319-79390346:-] | 0.5104 | 121 | 0 | -18.57 | -0.2942 |
MIMAT0005339 | rno-miR-873 | 366381 | Cdc26 | uccucuGAGUGUUCAAGGACg | || :| ||||||| | caaauuCUGGCUUGUUCCUGg | 2 | 16 | 177 | 197 | [rn4:5:79390883-79390903:-] | 0.5674 | 147 | 7 | -16.23 | -0.5774 |