DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004652 rno-miR-342-5p 296455 Zswim2 gagUUAGUGUCUAUCGUGGGGa |||| || :| |||||| aagAAUC-CAUGU-ACACCCCu 2 20 72 91 [rn4:3:67101274-67101293:-] 0.6863 123 6 -19.33 -0.1987 MIMAT0001547 rno-miR-450a 296455 Zswim2 guaaucCUUGUG---UA-GCGUUUUu |||:|: || :|||||| aaacuuGAAUAUUUAAUAUGCAAAAu 2 17 28 53 [rn4:3:67101312-67101337:-] 0.6863 130 6 -8.74 -0.5827 MIMAT0004791 rno-miR-379* 296455 Zswim2 caaucaccugguacaAUGUAUc |||||| auauuuuauuuguagUACAUAa 2 8 52 73 [rn4:3:67101292-67101313:-] 0.6863 120 6 -3.57 -0.3582 MIMAT0005317 rno-miR-463 296455 Zswim2 gauggguuuaaccgcAGAUAGu |||||| auauauauaaaauacUCUAUCa 2 8 99 120 [rn4:3:67101245-67101266:-] 0.6863 120 6 -9.87 -0.5537 MIMAT0012831 rno-miR-544 296455 Zswim2 cucgaACGAUUUUUACGUCUUa | :| || ||||| || uugaaUAUUUAAUAUGCAAAAu 2 18 32 53 [rn4:3:67101312-67101333:-] 0.6863 125 0 -5.49 -0.1125 MIMAT0012860 rno-miR-496 296455 Zswim2 cucuaaccgGUACAUUAUGAGu :|| ||||||| aaauauauaUAUAAAAUACUCu 2 14 95 116 [rn4:3:67101249-67101270:-] 0.6863 145 7 -7.71 -1.3573 MIMAT0000600 rno-miR-129 296455 Zswim2 cguucgggucugGCGUUUUuc :|||||| gaauauuuaauaUGCAAAAua 3 10 34 54 [rn4:3:67101311-67101331:-] 0.6863 121 0 -6.95 -0.8543 MIMAT0000790 rno-miR-21 296455 Zswim2 aguuguagucagacUAUUCGau |||||| -----------aaaAUAAGCau 3 9 1 11 [rn4:3:67101354-67101364:-] 0.6863 120 0 -4.08 -0.1453 MIMAT0000796 rno-miR-26a 296455 Zswim2 ucggauaggaccuaaUGAACUu |||||| uauuacaccagaaaaACUUGAa 2 8 15 36 [rn4:3:67101329-67101350:-] 0.6863 120 6 -9.42 -0.7251 MIMAT0000797 rno-miR-26b 296455 Zswim2 uggauaGGACUUAAUGAACUu || ||| |||||| auuacaCCAGAAAAACUUGAa 2 16 16 36 [rn4:3:67101329-67101349:-] 0.6863 127 6 -12.36 -0.7251 MIMAT0000844 rno-miR-138 296455 Zswim2 gccggacuAAGUGUUGUGGUCga ||:|: ||||||| uaagcauuUUUAUUACACCAGaa 3 16 5 27 [rn4:3:67101338-67101360:-] 0.6863 139 0 -16.78 -0.2566 MIMAT0000851 rno-miR-145 296455 Zswim2 ucccUAA-G-GACCCUUUUGACCUg ||| | | | |||||| || uuuuAUUACACCAGAAAAACUUGAa 2 20 12 36 [rn4:3:67101329-67101353:-] 0.6863 121 0 -7.11 -0.1836 MIMAT0000855 rno-miR-153 296455 Zswim2 cuagugaaaacacugAUACGUu |||||| aacuugaauauuuaaUAUGCAa 2 8 29 50 [rn4:3:67101315-67101336:-] 0.6863 120 6 -9.87 -0.8228 MIMAT0000857 rno-miR-181c 296455 Zswim2 ugaGUGG-C-UGUCCAACUUACAa |||| | | | |||||| | uuaCACCAGAAAAACUUGAAUAUu 2 20 17 40 [rn4:3:67101325-67101348:-] 0.6863 121 0 -11.74 -0.2176 MIMAT0000858 rno-miR-181a 296455 Zswim2 ugaGUGG-CUGUCGCAACUUACAa |||| || | |||||| | uuaCACCAGAAAAACUUGAAUAUu 2 21 17 40 [rn4:3:67101325-67101348:-] 0.6863 127 0 -12.12 -0.2176 MIMAT0004742 rno-miR-296 296455 Zswim2 ccUCUCGGAGGUGGGUUGGGAg ||| :| ::: || |||| uaAGAAUCCAUGUACACCCCUg 2 21 71 92 [rn4:3:67101273-67101294:-] 0.6863 120 0 -16.46 -0.1068 MIMAT0001534 rno-miR-448 296455 Zswim2 uacCCUGUAGGAUGUAUACGUu | |:|| :|| ||||||| cuuGAAUAU-UUA-AUAUGCAa 2 20 31 50 [rn4:3:67101315-67101334:-] 0.6863 151 7 -10.97 -1.3478 MIMAT0003201 rno-miR-382 296455 Zswim2 gcUUAGGUGGUGCUUGUUGAAg | | ||||| ||| ||||| uuAUUACACCA-GAAAAACUUg 2 21 14 34 [rn4:3:67101331-67101351:-] 0.6863 138 0 -14.18 -0.1157 MIMAT0005299 rno-miR-181d 296455 Zswim2 uggGUGG-CUGUUGUUACUUACAa |||| || || ||||| | uuaCACCAGAAAAACUUGAAUAUu 2 21 17 40 [rn4:3:67101325-67101348:-] 0.6863 127 0 -12.11 -0.2156

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G056912 Zswim2 Rattus norvegicus 296455

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Zswim2 RAID00752280 rno-miR-26a-5p miRNA MIMAT0000796 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID01364588 rno-miR-145-5p miRNA MIMAT0000851 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID02376258 rno-miR-138-5p miRNA MIMAT0000844 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID02400829 rno-miR-296-3p miRNA MIMAT0004742 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID02472683 rno-miR-181c-5p miRNA MIMAT0000857 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID02615702 rno-miR-129-5p miRNA MIMAT0000600 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID02839657 rno-miR-181a-5p miRNA MIMAT0000858 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID03276719 rno-miR-21-5p miRNA MIMAT0000790 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID03414325 rno-miR-448-3p miRNA MIMAT0001534 Zswim2 mRNA 296455 Prediction 0.2202 Zswim2 RAID03728393 rno-miR-153-3p miRNA MIMAT0000855 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID03763313 rno-miR-26b-5p miRNA MIMAT0000797 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID03833322 rno-miR-181d-5p miRNA MIMAT0005299 Zswim2 mRNA 296455 Prediction 0.1828 Zswim2 RAID03834617 rno-miR-382-5p miRNA MIMAT0003201 Zswim2 mRNA 296455 Prediction 0.1828