DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004645 rno-miR-148b-5p 361815 Rnf8 ggacuCACAUAUUGUCU-UGAAg ||||: :|||| |||| aagccGUGUGCUGCAGAGACUUa 2 18 92 114 [rn4:20:7954384-7954406:+] 0.5823 125 0 -16.31 -0.3540 MIMAT0000607 rno-miR-7a* 361815 Rnf8 uaccgucuGACACUAAACAACa || | |||||||| cuguguuuCU-UCAUUUGUUGa 2 15 233 253 [rn4:20:7954525-7954545:+] 0.5823 148 7 -11.77 -1.2043 MIMAT0000813 rno-miR-34b 361815 Rnf8 guuaGUCGA-UUAAUGUGACGGAu || :| :| |: ||||||| caccCACUUGGAGUG-ACUGCCUc 2 20 186 208 [rn4:20:7954478-7954500:+] 0.5823 144 7 -14.33 -0.2338 MIMAT0003113 rno-miR-489 361815 Rnf8 cgacgguauauacaCUACAGUAa |||||||| uuuaaugaaaacaaGAUGUCAUu 2 10 358 380 [rn4:20:7954650-7954672:+] 0.5823 145 7 -11.92 -0.9365 MIMAT0003382 rno-miR-664 361815 Rnf8 auccgaccccucAUUUACUUau | |||||| cugguuuaccuuUUAAUGAAaa 3 11 347 368 [rn4:20:7954639-7954660:+] 0.5823 122 0 -6.47 -0.1042 MIMAT0005279 rno-miR-466c 361815 Rnf8 guacAUGUACGUGUGUAGUGu |:| ||| ||||||| gcccUGC-UGCUGACAUCACc 2 18 147 166 [rn4:20:7954439-7954458:+] 0.5823 151 7 -13.63 -0.1525 MIMAT0005318 rno-miR-471 361815 Rnf8 caCUUUUCGUGAU--A-UGAUGCAu |:|: | |||: | ||||||| uuGGAGUG-ACUGCCUCACUACGUg 2 21 193 216 [rn4:20:7954485-7954508:+] 0.5823 144 7 -18.06 -0.5087 MIMAT0005322 rno-miR-532-5p 361815 Rnf8 ugUCAGGAUGUGAGUUCC-GUAc :||| |:| | ||||| ||| -aGGUCAUGCUC-CAAGGACAUg 2 21 1 21 [rn4:20:7954293-7954313:+] 0.5823 126 0 -19.56 -0.2720 MIMAT0005324 rno-miR-598-5p 361815 Rnf8 gaGCGUGGUAGCCGUAGUGGCg | ::|:: :| |||||||| gcCCUGCUGCUGACAUCACCGu 2 21 147 168 [rn4:20:7954439-7954460:+] 0.5823 156 7 -21.21 -0.1319 MIMAT0012839 rno-miR-668 361815 Rnf8 ccAUCACCC---GGCUCGG-CUCACUGu |: |||| || | :: ||||||| gcUGCUGGGACACCCACUUGGAGUGACu 2 23 176 203 [rn4:20:7954468-7954495:+] 0.5823 148 7 -18.95 -0.3098 MIMAT0012848 rno-miR-294 361815 Rnf8 ucuaucCCGGAGGUAAAACUc ||||| |||||||| gaagguGGCCUGCAUUUUGAg 2 16 323 343 [rn4:20:7954615-7954635:+] 0.5823 167 7 -26.68 -0.1026 MIMAT0012849 rno-miR-295 361815 Rnf8 cuUCACACGGGGUGU-AAACUCa || ||| ||::|| |||||| gaAG-GUGGCCUGCAUUUUGAGa 2 21 323 344 [rn4:20:7954615-7954636:+] 0.5823 134 6 -23.27 -0.4855 MIMAT0012853 rno-miR-761 361815 Rnf8 acACAGUCAAAGUGGGACGACg |||| | | :|||||||| ucUGUCUG-CUGGCCCUGCUGc 2 21 136 156 [rn4:20:7954428-7954448:+] 0.5823 158 7 -24.64 -0.1864 MIMAT0000791 rno-miR-22 361815 Rnf8 ugucaagaaguugACCGUCGAa |||||||| gagacuaggaggaUGGCAGCUu 2 10 25 46 [rn4:20:7954317-7954338:+] 0.5823 145 7 -15.73 -0.2897 MIMAT0000855 rno-miR-153 361815 Rnf8 cuAGUGAAAAC-ACUGA-UACGUu |:::||||| | || ||||| gaUUGUUUUUGAUACCUCAUGCAc 2 21 252 275 [rn4:20:7954544-7954567:+] 0.5823 127 0 -13.07 -0.3283 MIMAT0000885 rno-miR-214 361815 Rnf8 gacGGACAGAC-AC--GGACGACa :||||||| || ||||||| ccuUCUGUCUGCUGGCCCUGCUGc 2 19 133 156 [rn4:20:7954425-7954448:+] 0.5823 164 7 -29.52 -0.1864 MIMAT0005310 rno-miR-384-3p 361815 Rnf8 uaacacuuguUAAAGAUCCUUa |||||| |||| acaagaugucAUUUCUUGGAAa 2 13 368 389 [rn4:20:7954660-7954681:+] 0.5823 128 0 -9.61 -0.1331

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G095890 Rnf8 Rattus norvegicus 361815

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rnf8 RAID00649794 rno-miR-22-3p miRNA MIMAT0000791 Rnf8 mRNA 361815 Prediction 0.1828 Rnf8 RAID00974905 rno-miR-384-3p miRNA MIMAT0005310 Rnf8 mRNA 361815 Prediction 0.1828 Rnf8 RAID01954788 rno-miR-214-3p miRNA MIMAT0000885 Rnf8 mRNA 361815 Prediction 0.2202 Rnf8 RAID02406783 rno-miR-153-3p miRNA MIMAT0000855 Rnf8 mRNA 361815 Prediction 0.1828 Rnf8 RAID02870280 rno-miR-193b-5p miRNA MIMAT0035733 Rnf8 mRNA 361815 Prediction 0.1828 Rnf8 RAID03237981 rno-miR-489-3p miRNA MIMAT0003113 Rnf8 mRNA 361815 Prediction 0.1828