DNA & RNA Element - microRNA | Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score | MIMAT0004708 | rno-miR-9* | 29704 | Pacsin1 | ugAAAGCCAAUAGAUCGAAAua | |||| | ||| |||||| | auUUUCCG--AUCAAGCUUUua | 3 | 21 | 83 | 102 | [rn4:20:5921705-5921724:+] | 0.5943 | 141 | 0 | -11.35 | -0.5217 | MIMAT0012837 | rno-miR-632 | 29704 | Pacsin1 | aggccguccuuuGUCUGUg | |||||| | gccauagaguucCAGACAu | 2 | 8 | 64 | 82 | [rn4:20:5921686-5921704:+] | 0.5943 | 120 | 6 | -14.35 | -0.1283 | MIMAT0000790 | rno-miR-21 | 29704 | Pacsin1 | agUUGUA-GUCAGACUA-UUCGAu | :|||| : || ||| ||||| | caGACAUAUUUUCCGAUCAAGCUu | 2 | 21 | 76 | 99 | [rn4:20:5921698-5921721:+] | 0.5943 | 123 | 0 | -11.45 | -1.2278 | MIMAT0000903 | rno-miR-320 | 29704 | Pacsin1 | agcgGGAGAGUUGGGUCGAAAa | ::|: |:|:| |||||| | cauaUUUUCCGAUCAAGCUUUu | 2 | 19 | 80 | 101 | [rn4:20:5921702-5921723:+] | 0.5943 | 130 | 6 | -17.06 | -0.2116 | |
DNA & RNA Element - TRANSFAC | Accession | AS | Description | Species | Entrez | Pubmed | Binding Info | G025672 | | Pacsin1 | Rattus norvegicus | 29704 | | | |
DNA & RNA Element - RAID2 | Gene Name | RAID ID | Interactor 1 | Category 1 | ID 1 | Interactor 2 | Category 2 | ID 2 | Methods | Score | Pacsin1 | RAID00401721 | rno-miR-100-3p | miRNA | MIMAT0017112 | Pacsin1 | mRNA | 29704 | Prediction | 0.1828 | Pacsin1 | RAID01401847 | rno-miR-6316 | miRNA | MIMAT0025053 | Pacsin1 | mRNA | 29704 | Prediction | 0.1828 | Pacsin1 | RAID02603138 | rno-miR-320-3p | miRNA | MIMAT0000903 | Pacsin1 | mRNA | 29704 | Prediction | 0.1828 | Pacsin1 | RAID02732278 | rno-miR-6323 | miRNA | MIMAT0025062 | Pacsin1 | mRNA | 29704 | Prediction | 0.1828 | Pacsin1 | RAID02943030 | rno-miR-21-5p | miRNA | MIMAT0000790 | Pacsin1 | mRNA | 29704 | Prediction | 0.1828 | |