DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000364 dme-miR-289 37073 adp ucagcGUCCGAGGUGAAUUUAUAAAu :| ||| :| | |||||| uaauuUAAGCUAAGCGAACAUAUUUu 2 22 94 119 [dm3:2R:14041445-14041470:+] 0.5298 125 6 -7.50 -0.1014 MIMAT0011786 dme-miR-2280 37073 adp uaUAAAAUAAC----GGUUCGAUUCu || ||| || ::|||||||| aaAUAUUAGUGUAAUUUAAGCUAAGc 2 21 83 108 [dm3:2R:14041434-14041459:+] 0.5298 155 7 -14.03 -1.1154 MIMAT0011791 dme-miR-2283 37073 adp uaacagcauaaguacUAUAAAAg ||||||| uuaagcuaagcgaacAUAUUUUu 2 9 98 120 [dm3:2R:14041449-14041471:+] 0.5298 140 7 -4.00 -0.7489 MIMAT0012198 dme-miR-2491 37073 adp ucguugACGUUUCCGUUGUCGc |||| : |||||||| gcugcaUGCAUGUGCAACAGCa 2 17 36 57 [dm3:2R:14041387-14041408:+] 0.4642 160 7 -19.78 -0.4938 MIMAT0000120 dme-miR-14 37073 adp auCCUCUCUCUUUUUCUGAcu ||| : :||||||| aaGGAUGUUAUGAAAGACUau 3 20 168 188 [dm3:2R:14041519-14041539:+] 0.5298 127 0 -12.35 -0.1399 MIMAT0000347 dme-miR-283 37073 adp ucuuaauggucgacUAUAAAu |||||| uaagcuaagcgaacAUAUUUu 2 8 99 119 [dm3:2R:14041450-14041470:+] 0.5298 120 6 -5.67 -0.1004 MIMAT0000407 dme-miR-315 37073 adp cgaaagACUCGUUGU-UAGUUUu | :||||:| |||||| auccaaUCGGCAAUAUAUCAAAu 2 17 64 86 [dm3:2R:14041415-14041437:+] 0.5298 128 6 -11.35 -1.0894 MIMAT0000408 dme-miR-316 37073 adp gcggUCAUUCGCCUUUUUCUGu || | |: :|||||| augaAGGAUGUUAUGAAAGACu 2 19 165 186 [dm3:2R:14041516-14041537:+] 0.5298 130 6 -9.95 -0.1947 MIMAT0005472 dme-miR-375 37073 adp auUGAAUUCGGUUUGCUUGUuu |:||||||:||:|||||| uaAUUUAAGCUAAGCGAACAua 3 21 94 115 [dm3:2R:14041445-14041466:+] 0.5298 168 0 -26.31 -0.2263 MIMAT0005486 dme-miR-970 37073 adp uaucggcgcacacaGAAUACu |||||| uacaaaguacgaagCUUAUGa 2 8 148 168 [dm3:2R:14041499-14041519:+] 0.5298 120 6 -11.86 -0.1294 MIMAT0005027 dme-miR-1014 37073 adp gacGUUUACUUUUAC-UUAAAa ||||| |:|| ||||| uauCAAAUAUUAGUGUAAUUUa 2 19 79 100 [dm3:2R:14041430-14041451:+] 0.5298 126 0 -7.33 -1.1455

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score adp RAID00369514 dme-miR-305-5p miRNA MIMAT0000391 adp mRNA 37073 Prediction 0.1828 adp RAID01152996 dme-mir-iab-4 miRNA MI0000432 adp mRNA 37073 Prediction 0.1828 adp RAID01531456 dme-miR-927-5p miRNA MIMAT0005501 adp mRNA 37073 Prediction 0.1828 adp RAID01788759 dme-miR-4-3p miRNA MIMAT0000109 adp mRNA 37073 Prediction 0.1828 adp RAID01972764 dme-miR-994-5p miRNA MIMAT0005513 adp mRNA 37073 Prediction 0.1828 adp RAID01976728 dme-miR-1014-3p miRNA MIMAT0005027 adp mRNA 37073 Prediction 0.2202 adp RAID02098452 dme-miR-375-3p miRNA MIMAT0005472 adp mRNA 37073 Prediction 0.1828 adp RAID02286622 dme-miR-970-3p miRNA MIMAT0005486 adp mRNA 37073 Prediction 0.2202 adp RAID02381064 dme-miR-79-3p miRNA MIMAT0000352 adp mRNA 37073 Prediction 0.1828 adp RAID02407992 dme-miR-964-5p miRNA MIMAT0005478 adp mRNA 37073 Prediction 0.1828 adp RAID02521437 dme-miR-987-5p miRNA MIMAT0005504 adp mRNA 37073 Prediction 0.2202 adp RAID02586958 dme-miR-283-5p miRNA MIMAT0000347 adp mRNA 37073 Prediction 0.1828 adp RAID02664873 dme-miR-316-5p miRNA MIMAT0000408 adp mRNA 37073 Prediction 0.1828 adp RAID02826153 dme-miR-967-5p miRNA MIMAT0005482 adp mRNA 37073 Prediction 0.1828 adp RAID02909248 dme-miR-14-3p miRNA MIMAT0000120 adp mRNA 37073 Prediction 0.1828 adp RAID02910533 dme-miR-1017-3p miRNA MIMAT0005030 adp mRNA 37073 Prediction 0.1828 adp RAID03054730 dme-miR-315-5p miRNA MIMAT0000407 adp mRNA 37073 Prediction 0.1828 adp RAID03159161 dme-miR-277-3p miRNA MIMAT0000338 adp mRNA 37073 Prediction 0.1828 adp RAID03586407 dme-miR-5-5p miRNA MIMAT0000110 adp mRNA 37073 Prediction 0.1828