DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000388 dme-miR-303 33937 cort uggucaaAGGACACUUUG-GAUUu |:|||| ||| |||| aaauccaUUCUGUUUAACUCUAAa 2 17 98 121 [dm3:2L:6674679-6674702:-] 0.5211 124 0 -16.37 -1.2011 MIMAT0011784 dme-miR-2279* 33937 cort uuaaagugugugucuAUAAAUu |||||| auuugugcuuuucauUAUUUAu 2 8 53 74 [dm3:2L:6674726-6674747:-] 0.5211 120 6 -4.78 -0.1463 MIMAT0012215 dme-miR-2500 33937 cort gacuccagguGUGUGUUUUAGg ||:| |||||| auauuacuuuCAUAAAAAAUCc 2 13 82 103 [dm3:2L:6674697-6674718:-] 0.5211 124 6 -12.47 -0.2578 MIMAT0000332 dme-miR-274 33937 cort uaAUGGG-CAAUCACA--GCCAGUGUUUu ||::| || | | | |||:||| uuUAUUCAAUUCAUAUUACUUUCAUAAAa 2 25 70 98 [dm3:2L:6674702-6674730:-] 0.5211 126 0 -11.39 -0.1232 MIMAT0000341 dme-miR-279 33937 cort aaUUACUCACACCUAGAUCAGu | || | || ||||||| uaAUUGUUUAUGUUUCUAGUCu 2 21 19 40 [dm3:2L:6674760-6674781:-] 0.5211 152 7 -10.71 -1.2583 MIMAT0000352 dme-miR-79 33937 cort uaCGAAACCAUUAGAUC-GAAAu |:|| || ||||| |||| uuGUUUAUGU-UUCUAGUCUUUu 2 21 22 43 [dm3:2L:6674757-6674778:-] 0.5211 122 0 -11.97 -1.1888 MIMAT0000359 dme-miR-286 33937 cort ucgugcuCACAAGC-CAGAUCAGu || | :| ||||||| uuuaauuGUUUAUGUUUCUAGUCu 2 17 17 40 [dm3:2L:6674760-6674783:-] 0.5211 143 7 -10.84 -1.2560 MIMAT0005492 dme-miR-976 33937 cort cguaacuACUAUUGAUUAGGUu | |||| |||||| auuacuuUCAUAAAAAAUCCAu 2 16 84 105 [dm3:2L:6674695-6674716:-] 0.5211 127 6 -7.51 -0.1826 MIMAT0005504 dme-miR-987 33937 cort guAGUUAGGUCUGAUAAAUGAAAu |||||:|| || ||||||| auUCAAUUCA---UA-UUACUUUc 2 23 73 92 [dm3:2L:6674708-6674727:-] 0.5211 160 7 -10.55 -1.2333 MIMAT0005515 dme-miR-996 33937 cort ucugcucGUACUUUAGAUCAGu :||| ||||||| aauuguuUAUG-UUUCUAGUCu 2 16 20 40 [dm3:2L:6674760-6674780:-] 0.5211 141 7 -14.44 -1.2583

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score cort RAID00516593 dme-miR-996-3p miRNA MIMAT0005515 cort mRNA 33937 Prediction 0.2202 cort RAID00595030 dme-miR-976-3p miRNA MIMAT0005492 cort mRNA 33937 Prediction 0.1828 cort RAID01331485 dme-miR-279-3p miRNA MIMAT0000341 cort mRNA 33937 Prediction 0.2202 cort RAID01780526 dme-miR-274-5p miRNA MIMAT0000332 cort mRNA 33937 Prediction 0.1828 cort RAID01876972 dme-miR-286-3p miRNA MIMAT0000359 cort mRNA 33937 Prediction 0.2202 cort RAID02484135 dme-miR-79-3p miRNA MIMAT0000352 cort mRNA 33937 Prediction 0.1828 cort RAID03035629 dme-miR-987-5p miRNA MIMAT0005504 cort mRNA 33937 Prediction 0.2202