DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000117 dme-miR-12 49228 mod(mdg4) uggucAU-GGACUA-CAUUAUG-AGu || ::| || ||||||| || auauuUAUUUUAAUAGUAAUACAUCu 2 19 191 216 [dm3:3R:17198051-17198076:-] 0.5157 120 0 -9.76 -1.2506 MIMAT0000117 dme-miR-12 49228 mod(mdg4) uggucauggacuacaUUAUGAGu ||||||| aacgugaaauaucaaAAUACUCa 2 9 220 242 [dm3:3R:17188044-17188066:-] 0.5129 140 7 -12.13 -1.2376 MIMAT0000330 dme-miR-184* 49228 mod(mdg4) gccccgcucucuuaCUAUUCc |||||| aaagucuuuauaaaGAUAAGa 2 8 100 120 [dm3:3R:17198147-17198167:-] 0.5157 120 6 -5.27 -0.1169 MIMAT0000330 dme-miR-184* 49228 mod(mdg4) gccccgcucucUUACUAUUCc |:||||||| aguuauacacaAGUGAUAAGa 2 11 63 83 [dm3:3R:17180859-17180879:-] 0.5655 146 7 -8.96 -0.9834 MIMAT0000343 dme-miR-280 49228 mod(mdg4) auaGUAAAGU--AUACGUUG-CAUUUAUGu | || || | ||:||: | ||||| aaaCUUUCCAGCUCUGUAAUAAUUAAUACa 2 25 162 191 [dm3:3R:17198076-17198105:-] 0.5157 126 0 -9.22 -0.1072 MIMAT0000343 dme-miR-280 49228 mod(mdg4) auaGUAAAGUAUACGUUG--CAUUUAUgu ||| | | | | || |||||| agaCAUCUAACAAUCCACUUUUAAAUAaa 3 25 34 62 [dm3:3R:17180184-17180212:-] 0.5182 131 0 -3.74 -0.1152 MIMAT0000343 dme-miR-280 49228 mod(mdg4) auaguaaaguauacguugcaUUUAUGu |||||| -----ccuaagaaaacauacAAAUACc 2 8 1 22 [dm3:3R:17177366-17177387:-] 0.5963 120 6 -5.64 -0.2452 MIMAT0000343 dme-miR-280 49228 mod(mdg4) auaGUAAAGUAUACGUUG--CAUUUAUgu ||| | | | | || |||||| agaCAUCUAACAAUCCACUUUUAAAUAaa 3 25 119 147 [dm3:3R:17180184-17180212:-] 0.5182 131 0 -3.74 -0.1437 MIMAT0000343 dme-miR-280 49228 mod(mdg4) auAGUAAAGUAUACGUUGCAU-UUAUGu |:|| | ||| :| :||| ||||| auUUAUAGCUUAUUUAUUGUAGAAUACa 2 26 47 74 [dm3:3R:17182798-17182825:-] 0.5517 137 0 -10.87 -1.2897 MIMAT0000343 dme-miR-280 49228 mod(mdg4) auAGUAAAGUAUACGUUGCAUUUAUGu ||||| :| || || | |||||| aaUCAUUAUAAAUAAAAAGAAAAUACa 2 26 56 82 [dm3:3R:17178474-17178500:-] 0.4333 149 6 -11.83 -0.1676 MIMAT0000343 dme-miR-280 49228 mod(mdg4) auaGUAAAGUAUACGUUG--CAUUUAUgu ||| | | | | || |||||| agaCAUCUAACAAUCCACUUUUAAAUAaa 3 25 451 479 [dm3:3R:17180184-17180212:-] 0.5182 131 0 -3.74 -0.1180 MIMAT0000363 dme-miR-288 49228 mod(mdg4) guAC-UUUACUUUAGCU-GUACUUu || ||: ||| |: | |||||| uaUGUAAGAGAAUUUAACCAUGAAg 2 22 183 207 [dm3:3R:17195844-17195868:-] 0.4891 128 6 -11.29 -1.2458 MIMAT0000363 dme-miR-288 49228 mod(mdg4) guaCUUUACUUUAG-C-UGUACUUu |:|: |||| | | ||||||| ccaGGAGCGAAAGCAGUACAUGAAg 2 21 403 427 [dm3:3R:17178129-17178153:-] 0.5375 158 7 -16.84 -0.5161 MIMAT0000363 dme-miR-288 49228 mod(mdg4) guACUUUACUU-UAG-C---UGUACUUu |||||| || ||| | |||||| ugUGAAAUAAAGAUCUGAACUCAUGAAa 2 22 287 314 [dm3:3R:17197045-17197072:-] 0.5126 130 6 -16.33 -0.1138 MIMAT0000364 dme-miR-289 49228 mod(mdg4) ucagcguccgaggugaauuUAUAAAu |||||| gcucuguaauaauuaauacAUAUUUa 2 8 172 197 [dm3:3R:17198070-17198095:-] 0.5157 120 6 -7.12 -0.5277 MIMAT0000364 dme-miR-289 49228 mod(mdg4) ucAGCGUCCGAGGUGAAU--UUAUAAau |: || : |:|:||| |||||| aaUUUCAUUUCCUAUUUAACAAUAUUca 3 25 148 175 [dm3:3R:17195876-17195903:-] 0.4891 139 0 -8.35 -0.1542 MIMAT0000364 dme-miR-289 49228 mod(mdg4) ucagcguccgaggugaauuUAUAAAu |||||| agaaaauggauaaauggacAUAUUUa 2 8 197 222 [dm3:3R:17177886-17177911:-] 0.4938 120 6 -6.17 -0.1695 MIMAT0000388 dme-miR-303 49228 mod(mdg4) uggucAAAGGACACUUUGGAUUu || ::| | |||||||| uuggcUUAUUUUUAAAACCUAAa 2 19 141 163 [dm3:3R:17198104-17198126:-] 0.5157 158 7 -12.44 -1.3167 MIMAT0000388 dme-miR-303 49228 mod(mdg4) uggucaAAGGACACUUUGGAUUu ||| | | |||||||: caauucUUCGUUUAAAACCUAGu 2 18 35 57 [dm3:3R:17180885-17180907:-] 0.5655 145 0 -12.17 -0.1399 MIMAT0000388 dme-miR-303 49228 mod(mdg4) uggucaaaggacacUUUGGAUUu |||||||| aaaucgagccaccuAAACCUAAg 2 10 216 238 [dm3:3R:17188764-17188786:-] 0.5158 145 7 -14.89 -0.5981 MIMAT0005465 dme-miR-954 49228 mod(mdg4) uguGUGUUGCGUUGUGGGUCu || || : |:|||||| gucCAAAAGAUUAUACCCAGu 2 19 34 54 [dm3:3R:17184412-17184432:-] 0.7079 138 6 -14.64 -0.1729 MIMAT0005475 dme-miR-961 49228 mod(mdg4) uagAGUCAAUGACCACUAGUUu |:| ||| | ||||||| uuaUUAAUUAAUUUUGAUCAAc 2 20 160 181 [dm3:3R:17177927-17177948:-] 0.4849 159 7 -6.82 -1.1255 MIMAT0005481 dme-miR-966 49228 mod(mdg4) ggugugucgggugUUGGGUGu :|||||| uuaaauuuauaugGACCCACg 2 9 263 283 [dm3:3R:17188003-17188023:-] 0.5227 124 6 -14.53 -0.1377 MIMAT0005481 dme-miR-966 49228 mod(mdg4) gguGUGUCGGGUG-UUGGGUGu |||| || ||||||| accCACA-AAAACAAACCCACa 2 19 486 506 [dm3:3R:17180978-17180998:-] 0.6235 143 7 -23.10 -1.2412 MIMAT0005481 dme-miR-966 49228 mod(mdg4) ggugugucggguguUGGGUGu |||||| acgucuacaugauuACCCACa 2 8 472 492 [dm3:3R:17180992-17181012:-] 0.6235 120 6 -20.24 -0.2702 MIMAT0005488 dme-miR-972 49228 mod(mdg4) cggauuuAUAAGCAUAACAUgu |||| ||||||| uauagcuUAUU--UAUUGUAga 3 16 50 69 [dm3:3R:17182803-17182822:-] 0.5517 132 0 -7.58 -0.3517 MIMAT0005494 dme-miR-978 49228 mod(mdg4) gaCGUUAAAUGCCGUGACCUGu || :| | ||||||||||| ugGCUGUCUUCGGCACUGGACa 2 21 134 155 [dm3:3R:17180787-17180808:-] 0.5655 172 7 -29.90 -0.1284 MIMAT0005499 dme-miR-983 49228 mod(mdg4) aguaaucaagcuuuGCAUAAUa :|||||| cguguauacauugcUGUAUUAc 2 9 2 23 [dm3:3R:17180919-17180940:-] 0.5655 124 6 -6.25 -0.1300 MIMAT0005502 dme-miR-985 49228 mod(mdg4) acgggcugguaaccUUGUAAAc ||||||| uuaagugaaaggaaAACAUUUa 2 9 141 162 [dm3:3R:17177946-17177967:-] 0.4927 140 7 -6.85 -1.2689 MIMAT0005509 dme-miR-991 49228 mod(mdg4) ugaAAGGUUUGAU-GUUGAAAUu ||: | | || : |||||| cuaUUUAACAAUAUUCACUUUAa 2 20 159 181 [dm3:3R:17195870-17195892:-] 0.4891 122 6 -8.37 -0.2581 MIMAT0005509 dme-miR-991 49228 mod(mdg4) ugaaagguuugAUGUUGAAAuu || |||||| ugauuaauucaUAAAACUUUca 3 12 289 310 [dm3:3R:17187976-17187997:-] 0.5227 127 0 -4.86 -0.2366 MIMAT0005521 dme-miR-1001 49228 mod(mdg4) acuaggaacccUCAAAUGGgu | |||||| uaccgaauaccAUUUUACCau 3 11 420 440 [dm3:3R:17184026-17184046:-] 0.5878 122 0 -7.45 -0.1860 MIMAT0005521 dme-miR-1001 49228 mod(mdg4) acuaggaacccucaAAUGGGu |||||| caacgucuacaugaUUACCCa 2 8 470 490 [dm3:3R:17180994-17181014:-] 0.6235 120 6 -11.02 -0.1087 MIMAT0005521 dme-miR-1001 49228 mod(mdg4) acuaggaacccucaAAUGGGu |||||| uauuuucauccuagUUACCCg 2 8 100 120 [dm3:3R:17197239-17197259:-] 0.4897 120 6 -15.63 -0.1004 MIMAT0005521 dme-miR-1001 49228 mod(mdg4) acuaggaacccUCAAAUGGgu | |||||| uaccgaauaccAUUUUACCau 3 11 49 69 [dm3:3R:17184026-17184046:-] 0.5878 122 0 -7.45 -0.2175 MIMAT0005018 dme-miR-1005 49228 mod(mdg4) gacgcuuAAUUUCUAAGGUCu | ||| |||||| uaaaaccUAAAACUUUCCAGc 2 15 153 173 [dm3:3R:17198094-17198114:-] 0.5157 122 6 -8.17 -0.1083 MIMAT0005018 dme-miR-1005 49228 mod(mdg4) gacgcUUAAUUUCUAAGGUcu ::||| : |||||| gcuauGGUUAUGAAUUCCAaa 3 17 12 32 [dm3:3R:17178076-17178096:-] 0.4927 132 0 -10.01 -0.1419 MIMAT0005021 dme-miR-1008 49228 mod(mdg4) acAUUUGUGUUUUUCGACACu || || | |:||||||| ccUAUAC-CUUAGAGCUGUGc 2 20 95 114 [dm3:3R:17177994-17178013:-] 0.4927 153 7 -15.63 -0.5328 MIMAT0005022 dme-miR-1009 49228 mod(mdg4) gacuuUACAUUGUUAAAAACUcu || |||: | |||||| cauuuAU-UAAUUAAUUUUGAuc 3 19 157 178 [dm3:3R:17177930-17177951:-] 0.4849 136 0 -2.64 -0.1170 MIMAT0005026 dme-miR-1013 49228 mod(mdg4) gcucaagccguaUGAAAAUa ||||||| aucuaacaauccACUUUUAa 2 9 38 57 [dm3:3R:17180189-17180208:-] 0.5182 140 7 -4.78 -1.0902 MIMAT0005026 dme-miR-1013 49228 mod(mdg4) gcucaagccguAUGAAAAUa |:|||||| aaauaaaugacUGCUUUUAa 2 10 56 75 [dm3:3R:17180171-17180190:-] 0.5182 129 6 -6.20 -0.5845 MIMAT0005026 dme-miR-1013 49228 mod(mdg4) gcucaagccguaUGAAAAUa ||||||| aucuaacaauccACUUUUAa 2 9 123 142 [dm3:3R:17180189-17180208:-] 0.5182 140 7 -4.78 -1.1335 MIMAT0005026 dme-miR-1013 49228 mod(mdg4) gcucaagccguAUGAAAAUa |:|||||| aaauaaaugacUGCUUUUAa 2 10 141 160 [dm3:3R:17180171-17180190:-] 0.5182 129 6 -6.20 -0.5845 MIMAT0005026 dme-miR-1013 49228 mod(mdg4) gcucaagccguauGAAAAUa |||||| ugcgcaauaacacCUUUUAa 2 8 116 135 [dm3:3R:17181549-17181568:-] 0.4493 120 6 -4.04 -0.1225 MIMAT0005026 dme-miR-1013 49228 mod(mdg4) gcucaagccguaUGAAAAUa ||||||| aucuaacaauccACUUUUAa 2 9 455 474 [dm3:3R:17180189-17180208:-] 0.5182 140 7 -4.78 -1.0882 MIMAT0005026 dme-miR-1013 49228 mod(mdg4) gcucaagccguAUGAAAAUa |:|||||| aaauaaaugacUGCUUUUAa 2 10 473 492 [dm3:3R:17180171-17180190:-] 0.5182 129 6 -6.20 -0.5130 MIMAT0005029 dme-miR-1016 49228 mod(mdg4) gauucauaccucucUCCACUu |||||| auuuauuaagauuuAGGUGAa 2 8 195 215 [dm3:3R:17181269-17181279,17181480-17181489:-] 0.5364 120 6 -10.84 -0.1116 MIMAT0011784 dme-miR-2279* 49228 mod(mdg4) uuaaAGUGUGUGUCUAUAAAUu | |: |:| ||||||| guaaUAAUUAAUACAUAUUUAu 2 19 177 198 [dm3:3R:17198069-17198090:-] 0.5157 150 7 -6.10 -1.1352 MIMAT0011784 dme-miR-2279* 49228 mod(mdg4) uuaaaGUGUGUGUCU-AUAAAUu :| | ::||| |||||| cgaacUAGAAGUAGACUAUUUAu 2 18 30 52 [dm3:3R:17182114-17182136:-] 0.5446 121 6 -5.34 -0.8994 MIMAT0011784 dme-miR-2279* 49228 mod(mdg4) uuaaAGUGUGUGUCUAUAAAUu |::: |::||||||||| cuaaUUGUUCGUAGAUAUUUAc 2 19 77 98 [dm3:3R:17188188-17188209:-] 0.5032 162 7 -12.29 -0.2630 MIMAT0011784 dme-miR-2279* 49228 mod(mdg4) uuaaagugugugucuAUAAAUu |||||| aagaauauuauugauUAUUUAg 2 8 123 144 [dm3:3R:17188142-17188163:-] 0.5032 120 6 -5.02 -0.1177 MIMAT0011784 dme-miR-2279* 49228 mod(mdg4) uuaaaGUGUGUGUCUAUAAAUu :| |:: | ||||||| auggaUAAAUGGACAUAUUUAu 2 18 202 223 [dm3:3R:17177885-17177906:-] 0.4938 149 7 -3.71 -0.7822 MIMAT0011785 dme-miR-2279 49228 mod(mdg4) uuUAUUUAUAGAAGCGCACUUu || |||| | |||||| acAU-AAUAACGCAACGUGAAa 2 21 208 228 [dm3:3R:17188058-17188078:-] 0.5129 122 6 -10.41 -0.1596 MIMAT0011786 dme-miR-2280 49228 mod(mdg4) uauaaaAUAACGGUUCGAUUCu || |:|||||||| gccaccUAAACCUAAGCUAAGu 2 17 223 244 [dm3:3R:17188758-17188779:-] 0.5255 152 7 -14.02 -0.8240 MIMAT0011788 dme-miR-2281* 49228 mod(mdg4) aacguagacgucgacgUCUAUUa |||||| uuacaaaccgaaauaaAGAUAAu 2 8 280 302 [dm3:3R:17188700-17188722:-] 0.5826 120 6 -9.31 -0.1329 MIMAT0011791 dme-miR-2283 49228 mod(mdg4) uaACAGCA-UAAGUA-CUAUAAAag ||| | ||| || |||||| ucUGUAAUAAUUAAUACAUAUUUau 3 22 174 198 [dm3:3R:17198069-17198093:-] 0.5157 135 0 -3.09 -0.1553 MIMAT0011791 dme-miR-2283 49228 mod(mdg4) uaacaGCAUAAGUACUAUAAAAg | ||||: |||||||| guacaCUUAUUUUCGAUAUUUUc 2 19 84 106 [dm3:3R:17197253-17197275:-] 0.5009 162 7 -12.43 -0.4852 MIMAT0012195 dme-miR-307-as 49228 mod(mdg4) cugAGUGAGUUGGACCCACACu |||: :| : ||||||| auaUCAUAUAUUGGGGGUGUGc 2 20 430 451 [dm3:3R:17181033-17181054:-] 0.6235 151 7 -17.31 -0.5273 MIMAT0012196 dme-miR-2489 49228 mod(mdg4) ugacGUUUAUGUUGUAUGUUau | || | ||||||||| ---cCUAAGAAAACAUACAAau 3 19 1 19 [dm3:3R:17177369-17177387:-] 0.5963 146 0 -10.06 -0.1602 MIMAT0012196 dme-miR-2489 49228 mod(mdg4) ugacguuuauguuGUAUGUUAu :||||||| cuuaaagcauuuuUAUACAAUa 2 10 35 56 [dm3:3R:17177332-17177353:-] 0.4097 141 7 -10.89 -1.3308 MIMAT0012196 dme-miR-2489 49228 mod(mdg4) ugacGUUUA--UGUUGUAUGUUAu |:||| :|||::|||||| aggcCGAAUCCGCAAUGUACAAUa 2 19 396 419 [dm3:3R:17184047-17184070:-] 0.5878 149 6 -14.32 -0.1130 MIMAT0012196 dme-miR-2489 49228 mod(mdg4) ugacGUUUAUGUU--GUAUGUUAu | | ||:|| :||| ||| agaaCCAUUAUAAUCUAUAAAAUu 2 19 7 30 [dm3:3R:17196660-17196683:-] 0.4785 121 0 -4.39 -0.1138 MIMAT0012197 dme-miR-2490 49228 mod(mdg4) aacGUUGGACGAAAUAGC-GAAGu | |:|| | | ||| |||| auaCCAUCUUCAUCUUCGUCUUCa 2 21 114 137 [dm3:3R:17184329-17184352:-] 0.5878 120 0 -12.26 -1.1043 MIMAT0012199 dme-miR-2492 49228 mod(mdg4) aaACUUUCGAGAGCU-GUUUUGUa | | | |: || ||||||| ccUAAUAAAUUAAGACCAAAACAa 2 22 356 379 [dm3:3R:17197888-17197911:-] 0.5095 144 7 -6.91 -0.8237 MIMAT0012199 dme-miR-2492 49228 mod(mdg4) aaACUUUCGAG-AGCUGUUUUGua | |: || | |:| |||||| uuUAAGUGCACAUUGUCAAAACca 3 22 8 31 [dm3:3R:17180215-17180238:-] 0.5182 136 0 -8.38 -0.4468 MIMAT0012199 dme-miR-2492 49228 mod(mdg4) aaacuuucgagagcugUUUUGUa |||||| ----------ccuaagAAAACAu 2 8 1 13 [dm3:3R:17177375-17177387:-] 0.5963 120 6 -6.07 -0.2136 MIMAT0012199 dme-miR-2492 49228 mod(mdg4) aaACUUUC-GAGAGCUGU-UUUGUa | |:|| ||:||| || ||||| uuUAAGAGUCUUUCG-CAGAAACAu 2 22 1 24 [dm3:3R:17179077-17179100:-] 0.6120 130 0 -16.80 -1.2251 MIMAT0012199 dme-miR-2492 49228 mod(mdg4) aaACUUUCGAG-AGCUGUUUUGua | |: || | |:| |||||| uuUAAGUGCACAUUGUCAAAACca 3 22 93 116 [dm3:3R:17180215-17180238:-] 0.5182 136 0 -8.38 -0.1785 MIMAT0012199 dme-miR-2492 49228 mod(mdg4) aaacuuUCGAGAGCUGUU-UUGUa ||:|:| :||| |||| auuucuAGUUUUGCGCAAUAACAc 2 18 105 128 [dm3:3R:17181556-17181579:-] 0.4493 121 0 -9.92 -0.5229 MIMAT0012199 dme-miR-2492 49228 mod(mdg4) aaACUUUCGAG-AGCUGUUUUGua | |: || | |:| |||||| uuUAAGUGCACAUUGUCAAAACca 3 22 425 448 [dm3:3R:17180215-17180238:-] 0.5182 136 0 -8.38 -0.1474 MIMAT0012199 dme-miR-2492 49228 mod(mdg4) aaacuuucgagagcugUUUUGUa |||||| guaguuaagugaaaggAAAACAu 2 8 137 159 [dm3:3R:17177949-17177971:-] 0.4927 120 6 -10.31 -0.1040 MIMAT0012201 dme-miR-2493 49228 mod(mdg4) ugcgGAGCGUGUUUA-UGU-GUGCc :|:|:|:|||| ||| |||| caugUUUGUAUAAAUAACAUCACGg 2 20 137 161 [dm3:3R:17188841-17188865:-] 0.5061 134 0 -24.47 -1.0257 MIMAT0012203 dme-miR-2494 49228 mod(mdg4) gaacaUUCACCUGUAAUG-ACCCUu :||| ||: | || ||||| ggaagGAGUCGAUUUCACUUGGGAg 2 20 45 69 [dm3:3R:17198198-17198222:-] 0.5157 127 0 -15.31 -0.7554 MIMAT0012204 dme-miR-2495 49228 mod(mdg4) ucaguCGGGU-UAACUUCACGgu ||::| ||| |||||| -----GCUUACAUUUAAGUGCac 3 18 1 18 [dm3:3R:17180228-17180245:-] 0.5182 140 0 -12.34 -0.1303 MIMAT0012204 dme-miR-2495 49228 mod(mdg4) ucaGUCGGGUU--AACUUCACGGu || | ||| ||||||| guaCACCACAAAGACCAAGUGCCa 2 20 313 336 [dm3:3R:17178220-17178243:-] 0.6791 142 7 -17.35 -0.6364 MIMAT0012204 dme-miR-2495 49228 mod(mdg4) ucAGUCGGGUUAACUUCACGgu | | ||:|| |||||| ccUAAACCUAAGCUAAGUGCaa 3 21 227 248 [dm3:3R:17188754-17188775:-] 0.5255 136 0 -14.89 -0.1007 MIMAT0012208 dme-miR-2497* 49228 mod(mdg4) uuguugauguaaaacguuACGAAUg |||||| augguuauucuaauuaucUGCUUAa 2 8 97 121 [dm3:3R:17180821-17180845:-] 0.5655 120 6 -7.16 -0.1701 MIMAT0012211 dme-miR-2498 49228 mod(mdg4) uucauucugcccuuacGGUCAAa |||||| guccaaaagauuauacCCAGUUg 2 8 34 56 [dm3:3R:17184410-17184432:-] 0.7079 120 6 -9.65 -0.2084 MIMAT0012212 dme-miR-2499* 49228 mod(mdg4) cgUAACGCGACUGCAGAUGCGUGc || |:|| |: |||||| aaAUAGUGCACAUCAAAACGCACa 2 23 363 386 [dm3:3R:17178170-17178193:-] 0.6791 122 6 -13.91 -0.1877 MIMAT0012213 dme-miR-2499 49228 mod(mdg4) augccugcacuuacagUAGGCGUa ||||||| uguagucauaggccgaAUCCGCAa 2 9 387 410 [dm3:3R:17184056-17184079:-] 0.5878 140 7 -13.79 -0.9411 MIMAT0012213 dme-miR-2499 49228 mod(mdg4) augccugcacuuacagUAGGCGUa ||||||| uguagucauaggccgaAUCCGCAa 2 9 16 39 [dm3:3R:17184056-17184079:-] 0.5878 140 7 -13.79 -0.7083 MIMAT0012215 dme-miR-2500 49228 mod(mdg4) gacUCCAGGUGUG--UGUUUUAGg | || ||||: ||||| | uuuAAGUGCACAUUGUCAAAACCa 2 20 8 31 [dm3:3R:17180215-17180238:-] 0.5182 122 0 -15.84 -0.2088 MIMAT0012215 dme-miR-2500 49228 mod(mdg4) gacuccaggugugugUUUUAGg |||||| agaauacaaaucuugAAAAUCg 2 8 67 88 [dm3:3R:17182784-17182805:-] 0.5517 120 6 -5.29 -0.3530 MIMAT0012215 dme-miR-2500 49228 mod(mdg4) gacuccAGGUGUGUGUUUUAGg || | || ||||||| -----aUCGAGACUCAAAAUCu 2 17 1 17 [dm3:3R:17182149-17182165:-] 0.5446 156 7 -12.30 -1.1651 MIMAT0012215 dme-miR-2500 49228 mod(mdg4) gaCUCCAGGUGUGUGUUUUAGg | || |: ||| ||||||| uuGUGGGCU-CAC-CAAAAUCu 2 21 10 29 [dm3:3R:17188973-17188992:-] 0.5979 152 7 -17.25 -0.9494 MIMAT0012216 dme-miR-2501 49228 mod(mdg4) aauCGGGUCCG--UGAGGUUUGAAUg || :|| : ||||:||||||| cauGCAUAGCUAAACUCUAAACUUAa 2 22 241 266 [dm3:3R:17188020-17188045:-] 0.5227 164 7 -20.94 -1.2339 MIMAT0012216 dme-miR-2501 49228 mod(mdg4) aaucggguccgugaggUUUGAAug |||||| aauugauuaauucauaAAACUUuc 3 9 286 309 [dm3:3R:17187977-17188000:-] 0.5227 120 0 -7.50 -0.1218 MIMAT0012216 dme-miR-2501 49228 mod(mdg4) aaucggguccgugagGUUUGAAUg :||||||| uugcuguauuaccaaUAAACUUAc 2 10 12 35 [dm3:3R:17180907-17180930:-] 0.5655 141 7 -13.75 -1.0710 MIMAT0000105 dme-miR-1 49228 mod(mdg4) gaGGUAUGAAG-AAAUGUAAGGu :||| | || |||||||| ucUCAU-CGUCAAGUACAUUCCa 2 21 19 40 [dm3:3R:17188246-17188267:-] 0.5032 149 7 -16.92 -0.8430 MIMAT0000108 dme-miR-3 49228 mod(mdg4) acucUGUGUGAAACGGGUCAcu | | |:| | |||||| uccaAAAGAUUAUACCCAGUug 3 19 35 56 [dm3:3R:17184410-17184431:-] 0.7079 134 0 -12.13 -0.1711 MIMAT0000114 dme-miR-9a 49228 mod(mdg4) agUAUGUCGAUCUAUUGGUUUcu ||| | :|| | :|||||| uaAUA-AAUUA-A-GACCAAAac 3 22 358 377 [dm3:3R:17197890-17197909:-] 0.5095 127 0 -5.46 -0.1026 MIMAT0012531 dme-miR-10-3p 49228 mod(mdg4) uuuggagagaucuuggCUUAAAc |||||| cuuuaaguauguaagaGAAUUUa 2 8 176 198 [dm3:3R:17195853-17195875:-] 0.4891 120 6 -3.96 -0.1053 MIMAT0000120 dme-miR-14 49228 mod(mdg4) auccuCUCUCUUUUUCU-GACu | || | ||||| ||| aucauGUGAAAUAAAGAUCUGa 2 17 283 304 [dm3:3R:17197055-17197076:-] 0.5103 120 0 -8.84 -1.2000 MIMAT0000319 dme-miR-263a 49228 mod(mdg4) caCUUAAG--AAGGUCACGGUAAUUg |||| | ||::| ||||||| ccGAAUACCAUUUUA---CCAUUAAa 2 23 422 444 [dm3:3R:17184022-17184044:-] 0.5878 149 7 -10.39 -1.3017 MIMAT0000319 dme-miR-263a 49228 mod(mdg4) cacuuaaGAAGGUCACGGUAAUug :||: || |||||| ------aUUUUAAGAACCAUUAua 3 18 1 18 [dm3:3R:17196672-17196689:-] 0.4785 133 0 -7.71 -0.4369 MIMAT0000319 dme-miR-263a 49228 mod(mdg4) caCUUAAG--AAGGUCACGGUAAUUg |||| | ||::| ||||||| ccGAAUACCAUUUUA---CCAUUAAa 2 23 51 73 [dm3:3R:17184022-17184044:-] 0.5878 149 7 -10.39 -1.3485 MIMAT0000332 dme-miR-274 49228 mod(mdg4) uaaugggcaaucacagccaGUGUUUu |||||| aacgcaaauacguuuagugCACAAAa 2 8 332 357 [dm3:3R:17187929-17187954:-] 0.5227 120 6 -15.27 -0.1531 MIMAT0000332 dme-miR-274 49228 mod(mdg4) uaaugggcaaucacagccaGUGUUUu |||||| caacgucuacaugauuaccCACAAAa 2 8 470 495 [dm3:3R:17180989-17181014:-] 0.6235 120 6 -13.06 -0.1217 MIMAT0000333 dme-miR-275 49228 mod(mdg4) gcgcgcgaugaaguccAUGGACu |||||| uaagaaaacauacaaaUACCUGu 2 8 3 25 [dm3:3R:17177363-17177385:-] 0.5963 120 6 -10.48 -0.1323 MIMAT0000334 dme-miR-92a 49228 mod(mdg4) uauCCGGCCCUGUUCACGUUAc ||:| |:| |||||||| acuGGUCUUGGC-AGUGCAAUg 2 20 13 33 [dm3:3R:17197326-17197346:-] 0.6161 157 7 -23.97 -1.1062 MIMAT0000335 dme-miR-219 49228 mod(mdg4) guucuuaacgcaaaccUGUUAGu |||||| aaccauaagacaucuaACAAUCc 2 8 112 134 [dm3:3R:17180197-17180219:-] 0.5182 120 6 -5.52 -0.1017 MIMAT0000335 dme-miR-219 49228 mod(mdg4) guucuuaacgcaaaccUGUUAGu |||||| gugcacaucaaaacgcACAAUCa 2 8 368 390 [dm3:3R:17178166-17178188:-] 0.6791 120 6 -8.44 -0.1019 MIMAT0000338 dme-miR-277 49228 mod(mdg4) acagcauggucuaucaCGUAAAu |||||| uugaauaaaucuuaaaGCAUUUu 2 8 25 47 [dm3:3R:17177341-17177363:-] 0.5030 120 6 -5.57 -0.3400 MIMAT0000338 dme-miR-277 49228 mod(mdg4) acagcaUGGUCUAUC--AC-GUAAAu ||| || || || ||||| acauaaACCCGAAAGAAUGUCAUUUg 2 18 9 34 [dm3:3R:17184432-17184457:-] 0.7079 120 0 -9.58 -1.0386 MIMAT0000338 dme-miR-277 49228 mod(mdg4) acagcAUGGUC-UAUCACGUAAAu |||| | ||| ||||||| cuaguUACCCGAAUA-UGCAUUUu 2 19 110 132 [dm3:3R:17197227-17197249:-] 0.4784 159 7 -13.17 -0.8129 MIMAT0000342 dme-miR-33 49228 mod(mdg4) guuaCGCUGA-UG--UUACGUGGa |||| | |: |||||||| aggaGCGAAUCAUCAAAUGCACCu 2 18 299 322 [dm3:3R:17180341-17180364:-] 0.5182 151 7 -20.16 -0.7175 MIMAT0000345 dme-miR-281 49228 mod(mdg4) uguUUCUCUCGUUAAGGUACUgu |||||| : |||||| uguAAGAGAAUUUAACCAUGAag 3 21 185 207 [dm3:3R:17195844-17195866:-] 0.4891 136 0 -15.22 -0.2234 MIMAT0000347 dme-miR-283 49228 mod(mdg4) ucUUAAUGGUCGACUAUAAAu ||| |::| : |||||| guAAUAAUUAAUACAUAUUUa 2 20 177 197 [dm3:3R:17198070-17198090:-] 0.5157 127 6 -3.59 -0.5277 MIMAT0000347 dme-miR-283 49228 mod(mdg4) ucUUAAUGGUCGACU-AUAAAu || || ||: || ||||| cgAACUAGAAGUAGACUAUUUa 2 20 30 51 [dm3:3R:17182115-17182136:-] 0.5446 123 0 -7.79 -1.1189 MIMAT0000347 dme-miR-283 49228 mod(mdg4) ucUUAAUGGUCGACUAUAAAu ||||::: |: ||||||| cuAAUUGUUCGUAGAUAUUUa 2 20 77 97 [dm3:3R:17188189-17188209:-] 0.5032 163 7 -10.52 -0.9489 MIMAT0000347 dme-miR-283 49228 mod(mdg4) ucUUAAUGGUCGACU-AUAAAu :| ||::| :||| ||||| aaGAAUAUUA-UUGAUUAUUUa 2 20 123 143 [dm3:3R:17188143-17188163:-] 0.5032 121 0 -11.37 -1.0715 MIMAT0000347 dme-miR-283 49228 mod(mdg4) ucUUAAUGGUCGACUAUAAAu | |||:: | ||||||| acACUUAUUUUC-GAUAUUUu 2 20 86 105 [dm3:3R:17197254-17197273:-] 0.5009 149 7 -6.56 -0.7342 MIMAT0000347 dme-miR-283 49228 mod(mdg4) ucuuaauggucgacUAUAAAu |||||| auggauaaauggacAUAUUUa 2 8 202 222 [dm3:3R:17177886-17177906:-] 0.4938 120 6 -5.31 -0.1695 MIMAT0000352 dme-miR-79 49228 mod(mdg4) uacgaaaccaUUAG--AUCGAAau |||: |||||| guauagaaucAAUUUAUAGCUUau 3 13 36 59 [dm3:3R:17182813-17182836:-] 0.5517 123 0 -4.75 -0.2542 MIMAT0000352 dme-miR-79 49228 mod(mdg4) uacgaaaccAUUAG-AUCGAAau ||: | |||||| cucaaaaucUAGCCAUAGCUUgc 3 14 8 30 [dm3:3R:17182136-17182158:-] 0.5446 124 0 -9.07 -0.1256 MIMAT0000355 dme-miR-210 49228 mod(mdg4) aucggcgacAG-UGUGCGUGUu || | ||||||| uagugcacaUCAAAACGCACAa 2 13 366 387 [dm3:3R:17178169-17178190:-] 0.6791 143 7 -17.34 -1.2780 MIMAT0000358 dme-miR-92b 49228 mod(mdg4) cguCCGGCCCUGAUCACGUUAa ||:| |:| |||||||| acuGGUCUUGGC-AGUGCAAUg 2 20 13 33 [dm3:3R:17197326-17197346:-] 0.6161 157 7 -21.76 -1.1062 MIMAT0000362 dme-miR-263b 49228 mod(mdg4) cacUUAAGAGGGUCACG-GUUc ||| | :::||||| ||| gcaAAUACGUUUAGUGCACAAa 2 19 335 356 [dm3:3R:17187930-17187951:-] 0.5227 126 0 -12.14 -1.1429 MIMAT0000362 dme-miR-263b 49228 mod(mdg4) cacuuaagaggguCACGGUUc ||||||| auauauuggggguGUGCCAAa 2 9 435 455 [dm3:3R:17181029-17181049:-] 0.6235 140 7 -10.11 -0.9797 MIMAT0000389 dme-miR-31b 49228 mod(mdg4) gucgauaaggcUGUAGAACGGu :| ||||||| ugguaacgagaGCUUCUUGCCc 2 12 242 263 [dm3:3R:17181221-17181242:-] 0.6235 143 7 -13.43 -0.4609 MIMAT0000390 dme-miR-304 49228 mod(mdg4) gaguguaaauguuuaACUCUAAu ||||||| --------------aUGAGAUUa 2 9 1 9 [dm3:3R:17184457-17184465:-] 0.7079 140 7 -9.01 -0.9955 MIMAT0000391 dme-miR-305 49228 mod(mdg4) guCUCGUGGACUACUUCAUGUua || :|::| | |||||||| uuGAUUAUUU-A-GAAGUACAcc 3 22 133 153 [dm3:3R:17188133-17188153:-] 0.5032 137 0 -12.45 -0.1673 MIMAT0000391 dme-miR-305 49228 mod(mdg4) gucUCGUGGACUA-CUUCAUGUua | || || | ||||||| aguAACAGCUAUUAAAAGUACAua 3 21 43 66 [dm3:3R:17197293-17197316:-] 0.5585 131 0 -10.39 -0.1405 MIMAT0000392 dme-miR-9c 49228 mod(mdg4) agaugucgaucUUAUGGUUUcu || |||||| ccuaauaaauuAAGACCAAAac 3 12 356 377 [dm3:3R:17197890-17197911:-] 0.5095 127 0 -6.86 -0.1026 MIMAT0000393 dme-miR-306 49228 mod(mdg4) aacUCUCAGUGAUUCAUGGACu | | :|| || |||||| agaAAACAUAC-AAAUACCUGu 2 20 5 25 [dm3:3R:17177363-17177383:-] 0.5963 121 6 -10.49 -0.1336 MIMAT0000395 dme-miR-9b 49228 mod(mdg4) guaugucgAUUU--UAGUGGUUUcu |||| | |||||| gcuccuaaUAAAUUAAGACCAAAac 3 16 353 377 [dm3:3R:17197890-17197914:-] 0.5095 126 0 -6.47 -0.1016 MIMAT0000397 dme-miR-125 49228 mod(mdg4) agugUUCAAUCCCAGA-GUCCCu | || | ||||| ||||| aaggAUGUGACGGUCUGCAGGGc 2 19 244 266 [dm3:3R:17180397-17180416,17180696-17180698:-] 0.5418 130 0 -18.30 -0.1213 MIMAT0000398 dme-miR-307 49228 mod(mdg4) gagugaguuccuCCAACACu ||||||| -----ccccgucGGUUGUGg 2 9 1 15 [dm3:3R:17188987-17189001:-] 0.6456 140 7 -12.04 -0.6202 MIMAT0000400 dme-miR-31a 49228 mod(mdg4) agUCGAUACGGCUGUAGAACGGu :|: | | :| ||||||| uuGGUAACGAGAGCUUCUUGCCc 2 22 241 263 [dm3:3R:17181221-17181243:-] 0.6235 145 7 -13.59 -0.4609 MIMAT0000401 dme-miR-309 49228 mod(mdg4) auccUGUUUGAAAUGGGUCAcg | |:|:| |||||||| uccaAAAGAUUAUACCCAGUug 3 19 35 56 [dm3:3R:17184410-17184431:-] 0.7079 146 0 -16.70 -0.1711 MIMAT0000402 dme-miR-310 49228 mod(mdg4) uuUCCGGCCCUUCACACGUUAu :| |: || | ||||||| cuGGUCUUGGCA--GUGCAAUg 2 21 14 33 [dm3:3R:17197326-17197345:-] 0.6161 145 7 -16.36 -1.0879 MIMAT0000403 dme-miR-311 49228 mod(mdg4) aguCCGGCCACUUACACGUUAu ||:| ||: ||||||| acuGGUC-UUGGCAGUGCAAUg 2 20 13 33 [dm3:3R:17197326-17197346:-] 0.6161 149 7 -18.02 -1.1085 MIMAT0000404 dme-miR-312 49228 mod(mdg4) aguccggcaGAGUUCACGU-UAu :|:||||||| || --gcuuacaUUUAAGUGCACAUu 2 14 1 21 [dm3:3R:17180225-17180245:-] 0.5182 121 0 -11.32 -0.9348 MIMAT0000404 dme-miR-312 49228 mod(mdg4) agUCCGGCAG--AGUUCACGU-UAu ||||: | |:||||||| || auAGGCUUACAUUUAAGUGCACAUu 2 21 82 106 [dm3:3R:17180225-17180249:-] 0.5182 127 0 -19.19 -0.7729 MIMAT0000404 dme-miR-312 49228 mod(mdg4) agUCCGGCA-G-AGUUC-ACGUUAu | || || | | ||| |||||| gaAAGCAGUACAUGAAGCUGCAAUu 2 21 411 435 [dm3:3R:17178121-17178145:-] 0.5224 122 6 -11.79 -0.4652 MIMAT0000404 dme-miR-312 49228 mod(mdg4) agUCCGGCAG--AGUUCACGU-UAu ||||: | |:||||||| || auAGGCUUACAUUUAAGUGCACAUu 2 21 414 438 [dm3:3R:17180225-17180249:-] 0.5182 127 0 -19.19 -0.6990 MIMAT0000404 dme-miR-312 49228 mod(mdg4) aguccggCAGAGU--UCACGUUAu ||||:: |||||||| ccaacugGUCUUGGCAGUGCAAUg 2 16 10 33 [dm3:3R:17197326-17197349:-] 0.6161 154 7 -18.96 -1.1085 MIMAT0000405 dme-miR-313 49228 mod(mdg4) agCCCGACACUUUUCACGUUAu || || || : |||||||| cuGGUCU-UG-GCAGUGCAAUg 2 21 14 33 [dm3:3R:17197326-17197345:-] 0.6161 152 7 -18.00 -1.1062 MIMAT0000407 dme-miR-315 49228 mod(mdg4) cgaaagacucguuguUAGUUUu |||||| aacgcaacgugaaauAUCAAAa 2 8 215 236 [dm3:3R:17188050-17188071:-] 0.5129 120 6 -10.61 -0.1605 MIMAT0000408 dme-miR-316 49228 mod(mdg4) gcggucauucGCCUUUUUCUGu | | ||||||| ucauccucuuCAGCAAAAGACc 2 13 135 156 [dm3:3R:17184310-17184331:-] 0.5878 144 7 -9.73 -0.2404 MIMAT0000408 dme-miR-316 49228 mod(mdg4) gcggucauucgccuuUUUCUGu |||||| uauaaguucaaauucAAAGACa 2 8 56 77 [dm3:3R:17195974-17195995:-] 0.4047 120 6 -11.38 -0.1347 MIMAT0000408 dme-miR-316 49228 mod(mdg4) gcGGUCAUUCGCCUUUUUCUgu :|| || ||||||| aaUCAUUAUAAAUAAAAAGAaa 3 21 56 77 [dm3:3R:17178479-17178500:-] 0.4333 128 0 -8.57 -0.2461 MIMAT0000410 dme-miR-318 49228 mod(mdg4) acucUAUUUGUUUCGGGUCAcu | |:|: | |||||| uccaAAAGAUUAUACCCAGUug 3 19 35 56 [dm3:3R:17184410-17184431:-] 0.7079 130 0 -12.81 -0.1727 MIMAT0000413 dme-miR-iab-4-3p 49228 mod(mdg4) caaUGCAUAUGACUUC-CAUAUGGc |: |:| | ||| |||||| gucAUUUGUCCAAAAGAUUAUACCc 2 22 27 51 [dm3:3R:17184415-17184439:-] 0.7079 124 6 -6.66 -0.1372 MIMAT0000413 dme-miR-iab-4-3p 49228 mod(mdg4) caaugcauaugacuuccAUAUGGc |||||| gaauccgcaauguacaaUAUACCg 2 8 401 424 [dm3:3R:17184042-17184065:-] 0.5878 120 6 -12.02 -0.1343 MIMAT0000413 dme-miR-iab-4-3p 49228 mod(mdg4) caaugcAUAUGACUUCCAUAUGGc ||| : ||| ||| ||| auugauUAUUUAGAA-GUACACCa 2 19 132 154 [dm3:3R:17188132-17188154:-] 0.5032 124 0 -6.68 -0.1030 MIMAT0000413 dme-miR-iab-4-3p 49228 mod(mdg4) caaUGCAUAUG-ACUUCCAU-AUGGc ::|||||| | : ||| |||| -acGUGUAUACAUUGCUGUAUUACCa 2 22 1 25 [dm3:3R:17180917-17180941:-] 0.5655 124 0 -12.81 -1.2772 MIMAT0000413 dme-miR-iab-4-3p 49228 mod(mdg4) caaugcauaugacuuccAUAUGGc |||||| gaauccgcaauguacaaUAUACCg 2 8 30 53 [dm3:3R:17184042-17184065:-] 0.5878 120 6 -12.02 -0.1167 MIMAT0005467 dme-miR-190 49228 mod(mdg4) guuGGUUCUUA-UAGUU-UGUAUAGa :| : ||| ||:|| ||||||: agcUCUGUAAUAAUUAAUACAUAUUu 2 22 171 196 [dm3:3R:17198071-17198096:-] 0.5157 143 0 -10.06 -0.2530 MIMAT0005467 dme-miR-190 49228 mod(mdg4) guUGGUUCUU-AUAGUU----UGUAUAGa | :|| |: |||:|| ||||||| uaAGUAACAGCUAUUAAAAGUACAUAUCu 2 23 41 69 [dm3:3R:17197290-17197318:-] 0.5585 152 7 -14.93 -1.0542 MIMAT0005469 dme-miR-956 49228 mod(mdg4) uuaccUAAUCUCACCAGAGCUUu ||| | | ||||||| agcuaAUU--AUUUAUCUCGAAc 2 19 21 41 [dm3:3R:17198226-17198246:-] 0.5345 143 7 -8.56 -0.7471 MIMAT0005469 dme-miR-956 49228 mod(mdg4) uuACCUAAUCUCACCAGAGCUUu | || || | |||:||| ugUAGAAUACA--AAUCUUGAAa 2 22 64 84 [dm3:3R:17182788-17182808:-] 0.5517 126 0 -9.37 -0.1414 MIMAT0005469 dme-miR-956 49228 mod(mdg4) uuaccuaaucucaccAGAGCUUu ||||||| uggugugucguaaccUCUCGAAa 2 9 120 142 [dm3:3R:17195909-17195931:-] 0.4378 140 7 -12.65 -0.7735 MIMAT0005471 dme-miR-958 49228 mod(mdg4) uuUCAUCU------UAUCUUCUUAGAgu |||||| ||| : |||||| gaAGUAGACUAUUUAUAUGUGAAUCUaa 3 21 37 64 [dm3:3R:17182102-17182129:-] 0.5446 131 0 -12.70 -0.2863 MIMAT0005472 dme-miR-375 49228 mod(mdg4) auugaauucgguuugCUUGUUu |||||| aacgagauauauagaGAACAAg 2 8 104 125 [dm3:3R:17188161-17188182:-] 0.5032 120 6 -9.78 -0.1725 MIMAT0005474 dme-miR-960 49228 mod(mdg4) cgaUACGUUAGA-CCUUAUGAGu :|| ||| | ||||||| aacGUGAAAUAUCAAAAUACUCa 2 20 220 242 [dm3:3R:17188044-17188066:-] 0.5129 150 7 -12.62 -1.2337 MIMAT0005476 dme-miR-962 49228 mod(mdg4) cugucgUAGUUAAAGAGAUGGAAUa | :|| || ||||||| acccuaAAUAAAACCUAUACCUUAg 2 20 82 106 [dm3:3R:17178002-17178026:-] 0.4927 151 7 -8.60 -0.7005 MIMAT0005478 dme-miR-964 49228 mod(mdg4) uucAAUUCGAGG--GGAUAAGAUu ||||| || : || |||| auuUUAAGAACCAUUAUAAUCUAu 2 20 1 24 [dm3:3R:17196666-17196689:-] 0.4785 122 0 -10.34 -0.1133 MIMAT0005478 dme-miR-964 49228 mod(mdg4) uucaaUUCGAGGG--GAUAAGAUu |||:|: : :||||||| cucccAAGUUUAUGGUUAUUCUAa 2 18 86 109 [dm3:3R:17180833-17180856:-] 0.5655 148 7 -14.56 -1.1080 MIMAT0005479 dme-miR-932 49228 mod(mdg4) gacguUACGU-GAUGC-CUUAACu ||| | | ||| |||||| uuuauAUGGACCCACGAGAAUUGa 2 18 268 291 [dm3:3R:17187995-17188018:-] 0.5227 124 6 -16.56 -1.0641 MIMAT0005479 dme-miR-932 49228 mod(mdg4) gacguUACGUGAUGCCUUAACu || ||| ::||||||| auaacAU-CACGGUGGAAUUGg 2 18 150 170 [dm3:3R:17188832-17188852:-] 0.5061 155 7 -17.60 -0.6150 MIMAT0005487 dme-miR-971 49228 mod(mdg4) agugacAUUCUUCAUUGUGGUu | ||||| |||||| gauuauUUAGAAG-UACACCAa 2 17 135 155 [dm3:3R:17188131-17188151:-] 0.5032 126 6 -19.45 -0.2261 MIMAT0005492 dme-miR-976 49228 mod(mdg4) cguaacuacuauugaUUAGGUu |||||| cauaagacaucuaacAAUCCAc 2 8 30 51 [dm3:3R:17180195-17180216:-] 0.5182 120 6 -8.07 -0.1788 MIMAT0005492 dme-miR-976 49228 mod(mdg4) cguaacuacUAUUGAUUAGGUu || | |||||:| uuaagaaccAUUA-UAAUCUAu 2 14 4 24 [dm3:3R:17196666-17196686:-] 0.4785 127 0 -5.07 -0.1237 MIMAT0005492 dme-miR-976 49228 mod(mdg4) cguaacuacuauugaUUAGGUu |||||| cauaagacaucuaacAAUCCAc 2 8 115 136 [dm3:3R:17180195-17180216:-] 0.5182 120 6 -8.07 -0.2332 MIMAT0005492 dme-miR-976 49228 mod(mdg4) cguaacuacuauugaUUAGGUu |||||| cauaagacaucuaacAAUCCAc 2 8 447 468 [dm3:3R:17180195-17180216:-] 0.5182 120 6 -8.07 -0.1941 MIMAT0005493 dme-miR-977 49228 mod(mdg4) aaUCUGUUGCACUUAUA-GAGu || :||: | ||||| ||| gcAGUUAAUAU-AAUAUACUCa 2 20 15 35 [dm3:3R:17189749-17189769:-] 0.5226 121 0 -8.30 -0.5975 MIMAT0005496 dme-miR-980 49228 mod(mdg4) auUCGGGAAGUGU--UCCGUCGAu |||: | :| | |||||||| auAGCUGUAUAGAUUAGGCAGCUu 2 21 39 62 [dm3:3R:17181622-17181645:-] 0.4493 155 7 -18.14 -1.0915 MIMAT0005497 dme-miR-981 49228 mod(mdg4) acguccaaagcaGCUGUUGCUu | ||||||| ucgacgagccaaCUACAACGAu 2 11 410 431 [dm3:3R:17181053-17181074:-] 0.6235 142 7 -11.65 -0.8625 MIMAT0005501 dme-miR-927 49228 mod(mdg4) ccauUUCGCAUCCU--UAAGAUUu |||: || |: ||||||| ucccAAGUUUAUGGUUAUUCUAAu 2 19 87 110 [dm3:3R:17180832-17180855:-] 0.5655 153 7 -9.95 -1.0416 MIMAT0005503 dme-miR-986 49228 mod(mdg4) agucagugUUGCGAUAAGCUCu || | ||||||| uuuuuagaAAAACAAUUCGAGu 2 15 191 212 [dm3:3R:17178344-17178365:-] 0.6791 146 7 -12.05 -1.0226 MIMAT0005504 dme-miR-987 49228 mod(mdg4) guaGUUAGGUCUG-AUAAAUGAAAu :|||: | || ||||||:||| uaaUAAUUAAUACAUAUUUAUUUUa 2 22 178 202 [dm3:3R:17198065-17198089:-] 0.5157 156 0 -11.58 -0.1102 MIMAT0005504 dme-miR-987 49228 mod(mdg4) guaGUUAGGUCUGAUAAAUGAAAu :||||:| | | ||| ||| uuaUAAUCUAUA-AAAUUAGUUU- 2 22 14 35 [dm3:3R:17196655-17196676:-] 0.4785 127 0 -4.39 -0.2786 MIMAT0005505 dme-miR-988 49228 mod(mdg4) cgcacuccaaacgUUGUUCCCc |||||||| agcaaaagaccagAACAAGGGc 2 10 146 167 [dm3:3R:17184299-17184320:-] 0.5878 145 7 -11.81 -0.3381 MIMAT0005506 dme-miR-989 49228 mod(mdg4) caaggugAUGCAGUGUAGUGu || | ||||||| guuuguaUAAAUAACAUCACg 2 15 140 160 [dm3:3R:17188842-17188862:-] 0.5061 146 7 -12.65 -0.8457 MIMAT0005507 dme-miR-137 49228 mod(mdg4) gaugcacauaaGAGUUCGUUAu :| ||||||| ccauuuuaccaUUAAAGCAAUc 2 12 429 450 [dm3:3R:17184016-17184037:-] 0.5878 143 7 -7.10 -0.9090 MIMAT0005507 dme-miR-137 49228 mod(mdg4) gauGCACAUAA--GAGUUCGUUAu | || ||| ||:||||||| gguCCUG-AUUAGCUUAAGCAAUu 2 20 258 280 [dm3:3R:17188722-17188744:-] 0.5540 156 7 -13.53 -1.0437 MIMAT0005516 dme-miR-252 49228 mod(mdg4) gagGACGCCGUGAUCAUGAAUc :| || | || ||||||| augUUCCGCCUCUCGUACUUAu 2 20 207 228 [dm3:3R:17180714-17180735:-] 0.5655 159 7 -14.34 -0.3661 MIMAT0005519 dme-miR-999 49228 mod(mdg4) ucugugUCAGAAUGUCAAUUGu :| | :|||||||: uccggaGGACCAGCAGUUAAUa 2 17 3 24 [dm3:3R:17189760-17189781:-] 0.5226 132 0 -15.98 -0.1168 MIMAT0005519 dme-miR-999 49228 mod(mdg4) ucUGUGUCAGAAUGUCAAU-UGu || :|||:| ::||||| || aaACCUAGUUUAGUAGUUAUACa 2 21 49 71 [dm3:3R:17180871-17180893:-] 0.5655 132 0 -14.59 -1.0929 MIMAT0005520 dme-miR-1000 49228 mod(mdg4) ugacgacacuguccUGUUAUa |||||| uaaagcauuuuuauACAAUAa 2 8 37 57 [dm3:3R:17177331-17177351:-] 0.4097 120 6 -5.41 -0.4907 MIMAT0005520 dme-miR-1000 49228 mod(mdg4) ugacgacacuguccUGUUAUa |||||| ucauuuccuauuuaACAAUAu 2 8 152 172 [dm3:3R:17195879-17195899:-] 0.4891 120 6 -7.38 -0.1422 MIMAT0005520 dme-miR-1000 49228 mod(mdg4) ugacGACACUGUCCUGU-UAUa ||| |:||||| ||| aaguCUGAAUCGGGACACAUAc 2 18 17 38 [dm3:3R:17181646-17181667:-] 0.4493 121 0 -14.85 -0.3528 MIMAT0005016 dme-miR-1003 49228 mod(mdg4) gaCA-CUUAUACAUUUACACUcu || || ||| || |||||| aaGUAGACUAUUUAUAUGUGAau 3 21 38 60 [dm3:3R:17182106-17182128:-] 0.5446 147 0 -10.11 -0.1510 MIMAT0005016 dme-miR-1003 49228 mod(mdg4) gacACUU-A-UACAUUUACA-CUCu |||| | |||| :|||| ||| uguUGAACUAAUGUCGAUGUAGAGu 2 20 45 69 [dm3:3R:17188933-17188957:-] 0.5501 129 0 -13.52 -0.6251 MIMAT0005017 dme-miR-1004 49228 mod(mdg4) gacacucccuucacUACACUcu |||||| aguagacuauuuauAUGUGAau 3 9 39 60 [dm3:3R:17182106-17182127:-] 0.5446 120 0 -5.57 -0.1570 MIMAT0005019 dme-miR-1006 49228 mod(mdg4) gauACUUAUUCUUUAGCUUAAAu | |:|| | || |||||| cuuUAAGUAUGUAAGAGAAUUUa 2 21 176 198 [dm3:3R:17195853-17195875:-] 0.4891 132 6 -8.98 -0.1053 MIMAT0005023 dme-miR-1010 49228 mod(mdg4) gacguuUACCUUGCUAUCCACUUu || |: |||||||| guauuuAUUAAGAUUUAGGUGAAc 2 19 193 216 [dm3:3R:17181268-17181279,17181480-17181491:-] 0.5364 146 7 -10.16 -0.8451 MIMAT0005024 dme-miR-1011 49228 mod(mdg4) gacgcucgcUAAA---CUUGGUUAUu |||| |||||| || ---------AUUUUAAGAACCAUUAu 2 15 1 17 [dm3:3R:17196673-17196689:-] 0.4785 121 0 -7.38 -0.1396 MIMAT0005024 dme-miR-1011 49228 mod(mdg4) gacgcuCGCUAAACUUGGUUAUu || :| | ||||||| uacauuGCUGUAU-UACCAAUAa 2 18 8 29 [dm3:3R:17180913-17180934:-] 0.5655 143 7 -11.62 -1.2032 MIMAT0005027 dme-miR-1014 49228 mod(mdg4) gacguuUACUUUUACUUAAAa ||| ||: |||||| uuaaguAUGUAAGAGAAUUUa 2 16 178 198 [dm3:3R:17195853-17195873:-] 0.4891 131 6 -5.83 -0.1053

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score mod(mdg4) RAID00019213 dme-miR-79-3p miRNA MIMAT0000352 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00050850 dme-miR-956-3p miRNA MIMAT0005469 mod(mdg4) mRNA 49228 Prediction 0.2202 mod(mdg4) RAID00099600 dme-miR-971-3p miRNA MIMAT0005487 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00115381 dme-miR-305-5p miRNA MIMAT0000391 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00123947 dme-miR-927-5p miRNA MIMAT0005501 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00155920 dme-miR-960-5p miRNA MIMAT0005474 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00259434 dme-miR-999-3p miRNA MIMAT0005519 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00278830 dme-miR-974-5p miRNA MIMAT0005490 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00387415 dme-miR-315-5p miRNA MIMAT0000407 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00417162 dme-miR-14-3p miRNA MIMAT0000120 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00555657 dme-miR-980-3p miRNA MIMAT0005496 mod(mdg4) mRNA 49228 Prediction 0.2202 mod(mdg4) RAID00573773 dme-miR-31a-5p miRNA MIMAT0000400 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00589450 dme-miR-976-3p miRNA MIMAT0005492 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00601659 dme-miR-1010-3p miRNA MIMAT0005023 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00778562 dme-miR-31b-5p miRNA MIMAT0000389 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00864991 dme-miR-1006-3p miRNA MIMAT0005019 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID00888569 dme-miR-958-3p miRNA MIMAT0005471 mod(mdg4) mRNA 49228 Prediction 0.2202 mod(mdg4) RAID01103751 dme-miR-iab-4-3p miRNA MIMAT0000413 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01221270 dme-miR-274-5p miRNA MIMAT0000332 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01252538 dme-miR-962-5p miRNA MIMAT0005476 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01263101 dme-miR-1003-3p miRNA MIMAT0005016 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01391993 dme-miR-993-3p miRNA MIMAT0005512 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01407278 dme-miR-281-3p miRNA MIMAT0000345 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01412583 dme-miR-311-3p miRNA MIMAT0000403 mod(mdg4) mRNA 49228 Prediction 0.2202 mod(mdg4) RAID01605645 dme-miR-304-5p miRNA MIMAT0000390 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01741445 dme-miR-125-5p miRNA MIMAT0000397 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01852190 dme-miR-9b-5p miRNA MIMAT0000395 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01881244 dme-miR-9a-5p miRNA MIMAT0000114 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID01971868 dme-miR-9c-5p miRNA MIMAT0000392 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02000766 dme-miR-10-3p miRNA MIMAT0012531 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02185769 dme-miR-987-5p miRNA MIMAT0005504 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02232447 dme-miR-252-5p miRNA MIMAT0005516 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02255557 dme-miR-1-3p miRNA MIMAT0000105 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02296921 dme-miR-306-5p miRNA MIMAT0000393 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02319734 dme-miR-307a-3p miRNA MIMAT0000398 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02338988 dme-miR-137-3p miRNA MIMAT0005507 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02356491 dme-miR-964-5p miRNA MIMAT0005478 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02494116 dme-miR-989-3p miRNA MIMAT0005506 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02496090 dme-miR-982-5p miRNA MIMAT0005498 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02504874 dme-miR-932-5p miRNA MIMAT0005479 mod(mdg4) mRNA 49228 Prediction 0.2202 mod(mdg4) RAID02514122 dme-miR-313-3p miRNA MIMAT0000405 mod(mdg4) mRNA 49228 Prediction 0.2202 mod(mdg4) RAID02547293 dme-miR-309-3p miRNA MIMAT0000401 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02625594 dme-miR-33-5p miRNA MIMAT0000342 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02675067 dme-miR-92a-3p miRNA MIMAT0000334 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02696217 dme-miR-375-3p miRNA MIMAT0005472 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02760101 dme-miR-263a-5p miRNA MIMAT0000319 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02798891 dme-miR-1014-3p miRNA MIMAT0005027 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02869234 dme-miR-310-3p miRNA MIMAT0000402 mod(mdg4) mRNA 49228 Prediction 0.2202 mod(mdg4) RAID02920020 dme-miR-277-3p miRNA MIMAT0000338 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02941870 dme-miR-3-3p miRNA MIMAT0000108 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02965861 dme-miR-316-5p miRNA MIMAT0000408 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID02970412 dme-miR-190-5p miRNA MIMAT0005467 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03002192 dme-miR-275-3p miRNA MIMAT0000333 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03005465 dme-miR-318-3p miRNA MIMAT0000410 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03127249 dme-miR-1000-5p miRNA MIMAT0005520 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03152699 dme-miR-1011-3p miRNA MIMAT0005024 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03157252 dme-miR-977-3p miRNA MIMAT0005493 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03162246 dme-miR-981-3p miRNA MIMAT0005497 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03354652 dme-miR-283-5p miRNA MIMAT0000347 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03429604 dme-miR-263b-5p miRNA MIMAT0000362 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03564466 dme-miR-219-5p miRNA MIMAT0000335 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03640076 dme-miR-92b-3p miRNA MIMAT0000358 mod(mdg4) mRNA 49228 Prediction 0.2202 mod(mdg4) RAID03680182 dme-miR-986-5p miRNA MIMAT0005503 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03836167 dme-miR-1004-3p miRNA MIMAT0005017 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03904350 dme-miR-210-3p miRNA MIMAT0000355 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03940448 dme-miR-988-3p miRNA MIMAT0005505 mod(mdg4) mRNA 49228 Prediction 0.1828 mod(mdg4) RAID03975879 dme-miR-312-3p miRNA MIMAT0000404 mod(mdg4) mRNA 49228 Prediction 0.2202