DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000330 | dme-miR-184* | 35927 | Su(var)2-10 | gccccgcucucUUACUAUUcc | |:|||||| | cucuuauuuuaAGUGAUAAuu | 3 | 11 | 105 | 125 | [dm3:2R:5007563-5007583:+] | 0.5255 | 126 | 0 | -5.09 | -0.1095 |
MIMAT0005465 | dme-miR-954 | 35927 | Su(var)2-10 | ugUGUGUUGCGUUGUGGGUCu | ::|::| |: |||||||| | uaGUAUGA-GU-ACACCCAGu | 2 | 20 | 443 | 461 | [dm3:2R:5007021-5007039:+] | 0.5064 | 147 | 7 | -18.21 | -1.0422 |
MIMAT0005475 | dme-miR-961 | 35927 | Su(var)2-10 | uagagucAAUGACCAC-UAGUUu | || :||||| ||||| | aaguauuUUUUUGGUGCAUCAAu | 2 | 16 | 245 | 267 | [dm3:2R:5006823-5006845:+] | 0.4964 | 127 | 0 | -13.26 | -0.8974 |
MIMAT0005488 | dme-miR-972 | 35927 | Su(var)2-10 | cgGAUUU-AUAA---GCAUA-ACAUGu | ||||| |||| || || ||||| | auCUAAAUUAUUUCACG-AUAUGUACu | 2 | 21 | 961 | 986 | [dm3:2R:5007539-5007564:+] | 0.5255 | 124 | 0 | -11.83 | -0.9374 |
MIMAT0005488 | dme-miR-972 | 35927 | Su(var)2-10 | cgGAUUU-AUAA---GCAUA-ACAUGu | ||||| |||| || || ||||| | auCUAAAUUAUUUCACG-AUAUGUACu | 2 | 21 | 81 | 106 | [dm3:2R:5007539-5007564:+] | 0.5255 | 124 | 0 | -11.83 | -1.0869 |
MIMAT0005509 | dme-miR-991 | 35927 | Su(var)2-10 | ugaaaGGUUUGAUGUUGAA-AUu | || |:| | ||||| || | aauccCCUAGCCAAAACUUGUAu | 2 | 18 | 604 | 626 | [dm3:2R:5007182-5007204:+] | 0.5064 | 121 | 0 | -6.40 | -0.5598 |
MIMAT0005517 | dme-miR-997 | 35927 | Su(var)2-10 | acuuUGAGGAAG--CUCAAACCc | ::|| ||: |||||||| | gcguGUUCAUUUAGGAGUUUGGc | 2 | 18 | 726 | 748 | [dm3:2R:5007304-5007326:+] | 0.5661 | 152 | 7 | -13.36 | -0.1087 |
MIMAT0005026 | dme-miR-1013 | 35927 | Su(var)2-10 | gcucAAGCCGUAU-GAAAAUa | |||||: | |||||| | agguUUCGGUUCACCUUUUAc | 2 | 17 | 194 | 214 | [dm3:2R:5006772-5006792:+] | 0.4964 | 124 | 6 | -12.80 | -0.1455 |
MIMAT0011784 | dme-miR-2279* | 35927 | Su(var)2-10 | uuaAAGUGUGUGUCUA-UAAAUu | |||: :||| || ||||| | cgcUUCG-GCACCAAUAAUUUAg | 2 | 20 | 137 | 158 | [dm3:2R:5006715-5006736:+] | 0.4968 | 121 | 0 | -8.79 | -0.5188 |
MIMAT0011786 | dme-miR-2280 | 35927 | Su(var)2-10 | uaUAAAAUA---ACGGUUCGAUUCu | ||| ||| ||: ||| ||| | gaAUUAUAUCUCUGUAUAGCCAAGa | 2 | 21 | 12 | 36 | [dm3:2R:5006590-5006614:+] | 0.6266 | 123 | 0 | -10.09 | -0.1451 |
MIMAT0011790 | dme-miR-2282 | 35927 | Su(var)2-10 | uaAGAUAAAAAUCG--AGUGGCUa | | |||||| |: ||||||| | aaUGUAUUUUCUGUUGUCACCGAa | 2 | 21 | 938 | 961 | [dm3:2R:5007516-5007539:+] | 0.5255 | 159 | 7 | -15.63 | -1.0337 |
MIMAT0011790 | dme-miR-2282 | 35927 | Su(var)2-10 | uaAGAUAAAAAUCG--AGUGGCUa | | |||||| |: ||||||| | aaUGUAUUUUCUGUUGUCACCGAa | 2 | 21 | 58 | 81 | [dm3:2R:5007516-5007539:+] | 0.5255 | 159 | 7 | -15.63 | -1.1592 |
MIMAT0011791 | dme-miR-2283 | 35927 | Su(var)2-10 | uaacAGCAUAAGUACUAUAAAAg | || | |||| :|||||| | uaauUCAUUUUCAAUGUAUUUUc | 2 | 20 | 46 | 68 | [dm3:2R:5007504-5007526:+] | 0.5255 | 147 | 6 | -8.64 | -0.1032 |
MIMAT0012211 | dme-miR-2498 | 35927 | Su(var)2-10 | uucauucugcccuUACGGUCAAa | ||||||||| | auuuuaauaaaucAUGCCAGUUu | 2 | 11 | 1003 | 1025 | [dm3:2R:5007581-5007603:+] | 0.5255 | 150 | 7 | -14.09 | -0.8171 |
MIMAT0012211 | dme-miR-2498 | 35927 | Su(var)2-10 | uucauucugcccuuacGGUCAAa | |||||| | uuuaguaugaguacacCCAGUUa | 2 | 8 | 441 | 463 | [dm3:2R:5007019-5007041:+] | 0.5064 | 120 | 6 | -9.85 | -0.1203 |
MIMAT0012211 | dme-miR-2498 | 35927 | Su(var)2-10 | uucauucugcccuUACGGUCAAa | ||||||||| | auuuuaauaaaucAUGCCAGUUu | 2 | 11 | 123 | 145 | [dm3:2R:5007581-5007603:+] | 0.5255 | 150 | 7 | -14.09 | -1.1987 |
MIMAT0012212 | dme-miR-2499* | 35927 | Su(var)2-10 | cguAACGCGACU-GCAGAUG-CGUGc | || |:| | | |:||| |||| | gguUUCGGUUCACCUUUUACGGCACa | 2 | 22 | 195 | 220 | [dm3:2R:5006773-5006798:+] | 0.4964 | 120 | 0 | -11.28 | -0.6184 |
MIMAT0012215 | dme-miR-2500 | 35927 | Su(var)2-10 | gacUCCAGGUGUGUGUU-UUAGg | :|||::: | |||| |||| | uucGGGUUUGGA-ACAAGAAUCc | 2 | 20 | 790 | 811 | [dm3:2R:5007368-5007389:+] | 0.5357 | 121 | 0 | -15.06 | -0.5154 |
MIMAT0000108 | dme-miR-3 | 35927 | Su(var)2-10 | acucugugugaaacGGGUCAcu | |||||| | uuaguaugaguacaCCCAGUua | 3 | 9 | 442 | 463 | [dm3:2R:5007020-5007041:+] | 0.5064 | 120 | 0 | -15.36 | -0.1076 |
MIMAT0000348 | dme-miR-284 | 35927 | Su(var)2-10 | guUA-ACGACCUUAGUUCAACGACUGAAGu | || ||:| | :| | | |||||||| | auAUAUGUU--ACAUAUGAUUCUGACUUCa | 2 | 28 | 343 | 370 | [dm3:2R:5006921-5006948:+] | 0.5064 | 155 | 7 | -18.71 | -1.0501 |
MIMAT0000357 | dme-miR-100 | 35927 | Su(var)2-10 | guguuCA-AGCCUAAAUGCC-CAa | || |: ||| ||||| || | auuuuGUGUUAGAUCUACGGAGUc | 2 | 18 | 548 | 571 | [dm3:2R:5007126-5007149:+] | 0.5064 | 120 | 0 | -12.25 | -0.3461 |
MIMAT0000389 | dme-miR-31b | 35927 | Su(var)2-10 | gucgaUAAGGCUG--UAGAACGGu | |||:: |: ||| |||| | ugauaAUUUUAAUAAAUCAUGCCa | 2 | 18 | 118 | 141 | [dm3:2R:5007576-5007599:+] | 0.5255 | 120 | 0 | -11.86 | -0.1590 |
MIMAT0000401 | dme-miR-309 | 35927 | Su(var)2-10 | auCCUGUUUGAAAUGGGUCAcg | | |::|: | ||||||| | uaGUAUGAG-UACACCCAGUua | 3 | 21 | 443 | 463 | [dm3:2R:5007021-5007041:+] | 0.5064 | 130 | 0 | -11.62 | -0.1076 |
MIMAT0005466 | dme-miR-955 | 35927 | Su(var)2-10 | cugUGAGUUUGGAGACGUGCUAc | |: :|||:: :| |||||| | cgaAUCUAAAUUAUUUCACGAUa | 2 | 21 | 958 | 980 | [dm3:2R:5007536-5007558:+] | 0.5255 | 132 | 6 | -11.83 | -0.2297 |
MIMAT0005466 | dme-miR-955 | 35927 | Su(var)2-10 | cugUGAGUUUGGAGACGUGCUAc | |: :|||:: :| |||||| | cgaAUCUAAAUUAUUUCACGAUa | 2 | 21 | 78 | 100 | [dm3:2R:5007536-5007558:+] | 0.5255 | 132 | 6 | -11.83 | -0.3652 |
MIMAT0005470 | dme-miR-957 | 35927 | Su(var)2-10 | cggagUCAAAACCUGCCAAAGu | ||| || ||||||: | aauagAGUAUUUUUCGGUUUUa | 2 | 18 | 889 | 910 | [dm3:2R:5007467-5007488:+] | 0.5306 | 137 | 0 | -12.00 | -0.1076 |
MIMAT0005470 | dme-miR-957 | 35927 | Su(var)2-10 | cgGAGUCAAAACCUGCCAAAGu | :|| ||||| ||||||| | guUUCUGUUUU---CGGUUUCa | 2 | 21 | 86 | 104 | [dm3:2R:5008129-5008147:+] | 0.5230 | 156 | 7 | -19.85 | -0.9965 |
MIMAT0005470 | dme-miR-957 | 35927 | Su(var)2-10 | cggagUCAAAACCUGCCAAAGu | ||| || ||||||: | aauagAGUAUUUUUCGGUUUUa | 2 | 18 | 9 | 30 | [dm3:2R:5007467-5007488:+] | 0.5306 | 137 | 0 | -12.00 | -0.1616 |
MIMAT0005470 | dme-miR-957 | 35927 | Su(var)2-10 | cgGAGUCAAAACCUGCCAAAGu | :|| ||||| ||||||| | guUUCUGUUUU---CGGUUUCa | 2 | 21 | 86 | 104 | [dm3:2R:5008129-5008147:+] | 0.5230 | 156 | 7 | -19.85 | -1.0034 |
MIMAT0005471 | dme-miR-958 | 35927 | Su(var)2-10 | uuucaucuuaucuuCUUAGAgu | |||||| | uuucuguugucaccGAAUCUaa | 3 | 9 | 65 | 86 | [dm3:2R:5007523-5007544:+] | 0.5255 | 120 | 0 | -4.92 | -0.1407 |
MIMAT0005476 | dme-miR-962 | 35927 | Su(var)2-10 | cuGUCGUAGUUAAAGAGAUGGAAUa | || |: | | | | ||||||| | cgCA-CGGCCACAUAU-UACCUUAg | 2 | 24 | 115 | 137 | [dm3:2R:5008158-5008180:+] | 0.5471 | 143 | 7 | -14.74 | -0.4210 |
MIMAT0005476 | dme-miR-962 | 35927 | Su(var)2-10 | cuGUCGUAGUUAAAGAGAUGGAAUa | || |: | | | | ||||||| | cgCA-CGGCCACAUAU-UACCUUAg | 2 | 24 | 115 | 137 | [dm3:2R:5008158-5008180:+] | 0.5471 | 143 | 7 | -14.74 | -0.4291 |
MIMAT0005486 | dme-miR-970 | 35927 | Su(var)2-10 | uaUCG-GCGCACACAGAAU-ACu | :|| |||| || ||||| || | gcGGCUCGCG-GUCUCUUACUGu | 2 | 20 | 39 | 60 | [dm3:2R:5008082-5008103:+] | 0.4718 | 124 | 0 | -17.90 | -0.2946 |
MIMAT0005486 | dme-miR-970 | 35927 | Su(var)2-10 | uaucggcgcACA-CAGAAUAcu | ||| |||||| | uucacgauaUGUACUCUUAUuu | 3 | 13 | 92 | 113 | [dm3:2R:5007550-5007571:+] | 0.5255 | 123 | 0 | -7.80 | -0.1100 |
MIMAT0005486 | dme-miR-970 | 35927 | Su(var)2-10 | uaUCG-GCGCACACAGAAU-ACu | :|| |||| || ||||| || | gcGGCUCGCG-GUCUCUUACUGu | 2 | 20 | 39 | 60 | [dm3:2R:5008082-5008103:+] | 0.4718 | 124 | 0 | -17.90 | -0.3005 |
MIMAT0005493 | dme-miR-977 | 35927 | Su(var)2-10 | aaucUGUUGCACU---UAUAGAGu | ::|||| || ||||||| | gccaGUAACGAGAAUUAUAUCUCu | 2 | 18 | 1 | 24 | [dm3:2R:5006579-5006602:+] | 0.6266 | 152 | 7 | -13.67 | -0.8919 |
MIMAT0005501 | dme-miR-927 | 35927 | Su(var)2-10 | ccAUUUCGCAUCCUUAA-GAUUu | | | |: || |||| |||| | cuUUAUGUUUACAAAUUGCUAAu | 2 | 21 | 40 | 62 | [dm3:2R:5006618-5006640:+] | 0.6266 | 120 | 0 | -3.48 | -0.7450 |
MIMAT0005506 | dme-miR-989 | 35927 | Su(var)2-10 | caagguGA-UGCAGU-GUAGUGu | || || ||| |||||| | augauuCUGACUUCAUCAUCACu | 2 | 16 | 356 | 378 | [dm3:2R:5006934-5006956:+] | 0.5064 | 122 | 6 | -13.53 | -0.9403 |
MIMAT0005024 | dme-miR-1011 | 35927 | Su(var)2-10 | gacgcucGCUAAACU-UGGUUAUu | || || |: ||||||| | ucaaccaCGCUUCGGCACCAAUAa | 2 | 17 | 130 | 153 | [dm3:2R:5006708-5006731:+] | 0.4968 | 151 | 7 | -12.94 | -0.1424 |
MIMAT0005030 | dme-miR-1017 | 35927 | Su(var)2-10 | ccuacucaaacCCAUCUCGAAAg | || :||||||| | ccucagaaagcGGAGGAGCUUUa | 2 | 13 | 700 | 722 | [dm3:2R:5007278-5007300:+] | 0.5311 | 148 | 7 | -13.05 | -0.3699 |