DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000343 | dme-miR-280 | 33629 | RpL40 | auaGUA--AAGU-AUACGUUGCAUUUAUGu | ||| || | || :|| |||||||: | aacCAUGGUUAACCAUCUAA-GUAAAUAUa | 2 | 25 | 47 | 75 | [dm3:2L:4228458-4228486:+] | 0.5403 | 140 | 0 | -12.28 | -0.1074 |
MIMAT0005488 | dme-miR-972 | 33629 | RpL40 | cgGAUUUAUAAGCAUA-ACAUGu | ||||:|| ||| ||||| | auCUAAGUA--AAUAUAUGUACa | 2 | 21 | 61 | 81 | [dm3:2L:4228472-4228492:+] | 0.5403 | 121 | 0 | -13.56 | -1.2680 |
MIMAT0005498 | dme-miR-982 | 33629 | RpL40 | uaaaugaaguauaaaCAGGUCCu | ||||||| | gaucauccgucgacgGUCCAGGc | 2 | 9 | 6 | 28 | [dm3:2L:4228417-4228439:+] | 0.6090 | 140 | 7 | -15.80 | -0.3965 |
MIMAT0011787 | dme-miR-2280* | 33629 | RpL40 | agUCAA-UCGAACCUUCAUUUAa | :||| | | | |||||||| | auGGUUAACCAUCUAAGUAAAUa | 2 | 21 | 51 | 73 | [dm3:2L:4228462-4228484:+] | 0.5403 | 155 | 7 | -8.36 | -1.2607 |
MIMAT0000338 | dme-miR-277 | 33629 | RpL40 | acAGCAUGGUCUAUCACGUAAAu | ||| | | :|| ||||||| | aaUCGAA--AUGUAUUGCAUUUg | 2 | 22 | 100 | 120 | [dm3:2L:4228511-4228531:+] | 0.5205 | 154 | 7 | -10.64 | -0.3145 |
MIMAT0005519 | dme-miR-999 | 33629 | RpL40 | ucUGUGUCAGAAUGUCAAUUGu | ||| | | |::|||||| | cgACAAAACC--AUGGUUAACc | 2 | 21 | 41 | 60 | [dm3:2L:4228452-4228471:+] | 0.5403 | 133 | 6 | -9.00 | -0.1078 |