DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005502 dme-miR-985 35289 vls acgggcUGGUAACCUUGUAAAc ::|||| |||||| ugaagaGUCAUUCUUACAUUUa 2 17 54 75 [dm3:2L:20064311-20064332:-] 0.5639 124 6 -8.61 -0.1240 MIMAT0012202 dme-miR-2494* 35289 vls aaggguuagaccacGUGAAUg |||||| auucuuacauuuaaCACUUAu 2 8 63 83 [dm3:2L:20064303-20064323:-] 0.5639 120 6 -10.68 -0.1949 MIMAT0000109 dme-miR-4 35289 vls aguuaccaacagauCGAAAUa |||||| gaacaaauucaauuGCUUUAu 2 8 11 31 [dm3:2L:20064355-20064375:-] 0.5316 120 6 -6.30 -0.3253 MIMAT0005472 dme-miR-375 35289 vls auugAAUUCGGUUUGCUUGUUu || ||: : ||||||| ----UUUUGCU-GCCGAACAAa 2 19 1 17 [dm3:2L:20064369-20064385:-] 0.5984 144 7 -11.47 -1.3431 MIMAT0005504 dme-miR-987 35289 vls guaguuagGUCUGA-UAAAUGAAAu || |:| | ||:|||| cugccgaaCAAAUUCAAUUGCUUUa 2 17 6 30 [dm3:2L:20064356-20064380:-] 0.5984 135 0 -9.04 -0.1904

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score vls RAID02228177 dme-miR-4-3p miRNA MIMAT0000109 vls mRNA 35289 Prediction 0.1828 vls RAID02569584 dme-miR-375-3p miRNA MIMAT0005472 vls mRNA 35289 Prediction 0.2202 vls RAID02611965 dme-miR-284-3p miRNA MIMAT0000348 vls mRNA 35289 Prediction 0.1828 vls RAID02960473 dme-miR-987-5p miRNA MIMAT0005504 vls mRNA 35289 Prediction 0.1828 vls RAID03796943 dme-miR-985-3p miRNA MIMAT0005502 vls mRNA 35289 Prediction 0.1828