DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005499 dme-miR-983 34449 Lrr47 aguAAUCAA-GC-UUUGCAUAAua ||| || | | ||||||| cacUUAUUUAAGUAUACGUAUUuu 3 20 98 121 [dm3:2L:10518871-10518894:+] 0.5489 133 0 -8.14 -0.1339 MIMAT0005502 dme-miR-985 34449 Lrr47 acgggcugguaaccuUGUAAAc |||||| ugaaucagaugguguACAUUUu 2 8 2 23 [dm3:2L:10518775-10518796:+] 0.6522 120 6 -10.69 -0.3135 MIMAT0005510 dme-miR-992 34449 Lrr47 gaAUCAUGGUCUUUGCACAUGa | | |:||| | |||||| --UUGAAUCAG-AUGGUGUACa 2 21 1 19 [dm3:2L:10518774-10518792:+] 0.6522 126 6 -14.83 -0.7891 MIMAT0005025 dme-miR-1012 34449 Lrr47 gauaccccUUUUAGAAACUGAUu ||| | ||| |||| auuucuuuAAAUUAUUUCACUAa 2 16 40 62 [dm3:2L:10518813-10518835:+] 0.6522 127 0 -5.05 -0.1260 MIMAT0012202 dme-miR-2494* 34449 Lrr47 aaggguuagaCCACGUGAAUg || ||||||| uaauuggcgcGGAGCACUUAu 2 12 84 104 [dm3:2L:10518857-10518877:+] 0.6522 147 7 -13.15 -1.1086 MIMAT0012214 dme-miR-2500* 34449 Lrr47 ccAUAA-CAUAUACACACAAGGAAUg |||| || | | | |||:||| gcUAUUAGUCAAAG-AU-UUCUUUAa 2 24 26 49 [dm3:2L:10518799-10518822:+] 0.6522 130 0 -3.90 -0.1815 MIMAT0012215 dme-miR-2500 34449 Lrr47 gacuccaggugUGUGUUUUAGg |: ||||||: ccacaucauugAUCCAAAAUUa 2 12 64 85 [dm3:2L:10518837-10518858:+] 0.6522 127 0 -14.13 -0.1323 MIMAT0000412 dme-miR-iab-4-5p 34449 Lrr47 agUCCUAUGUAAG-UCAUAUGCa || | :|||: |||||||| ggAGCACUUAUUUAAGUAUACGu 2 21 94 116 [dm3:2L:10518867-10518889:+] 0.5489 159 7 -17.23 -1.2700 MIMAT0000413 dme-miR-iab-4-3p 34449 Lrr47 caaugcauAUGACUUCCAUAUGgc ||:| || |||||| ggagcacuUAUUUAA-GUAUACgu 3 17 94 116 [dm3:2L:10518867-10518889:+] 0.5489 134 0 -7.66 -0.2209 MIMAT0005463 dme-miR-iab-4as-5p 34449 Lrr47 gccauAUGGAAGUCAUAUGCAUu || :|| |||||||||| gcacuUA-UUUAAGUAUACGUAu 2 19 97 118 [dm3:2L:10518870-10518891:+] 0.5489 164 7 -15.67 -1.2202 MIMAT0005483 dme-miR-1002 34449 Lrr47 agcgggaaacauaggugAUGAAUu |||||| guauacguauuuuuauaUACUUAa 2 8 109 132 [dm3:2L:10518882-10518905:+] 0.4457 120 6 -11.72 -0.1994 MIMAT0005492 dme-miR-976 34449 Lrr47 cguaacuacUAUUGAUUAGGUu || |:|:||||| cuaaaccacAUCAUUGAUCCAa 2 14 59 80 [dm3:2L:10518832-10518853:+] 0.6522 137 0 -10.88 -0.1062 MIMAT0005513 dme-miR-994 34449 Lrr47 uagugCCGAUGAUAAAGGAAUc | | | |||||:||| uauuaGUCAAAGAUUUCUUUAa 2 18 28 49 [dm3:2L:10518801-10518822:+] 0.6522 137 0 -7.52 -0.1934 MIMAT0005516 dme-miR-252 34449 Lrr47 gaggacgccgugaucAUGAAUc |||||| auacguauuuuuauaUACUUAa 2 8 111 132 [dm3:2L:10518884-10518905:+] 0.4457 120 6 -5.70 -0.2070

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Lrr47 RAID00193090 dme-miR-252-5p miRNA MIMAT0005516 Lrr47 mRNA 34449 Prediction 0.2202 Lrr47 RAID00630192 dme-miR-iab-4-5p miRNA MIMAT0000412 Lrr47 mRNA 34449 Prediction 0.1828 Lrr47 RAID01140449 dme-miR-976-3p miRNA MIMAT0005492 Lrr47 mRNA 34449 Prediction 0.1828 Lrr47 RAID01229315 dme-miR-iab-4-3p miRNA MIMAT0000413 Lrr47 mRNA 34449 Prediction 0.1828 Lrr47 RAID01794919 dme-miR-1002-5p miRNA MIMAT0005483 Lrr47 mRNA 34449 Prediction 0.2202 Lrr47 RAID01840465 dme-miR-992-3p miRNA MIMAT0005510 Lrr47 mRNA 34449 Prediction 0.1828 Lrr47 RAID01907982 dme-miR-iab-8-5p miRNA MIMAT0005463 Lrr47 mRNA 34449 Prediction 0.1828 Lrr47 RAID02409290 dme-mir-iab-4 miRNA MI0000432 Lrr47 mRNA 34449 Prediction 0.1828 Lrr47 RAID03084201 dme-miR-994-5p miRNA MIMAT0005513 Lrr47 mRNA 34449 Prediction 0.1828 Lrr47 RAID03562464 dme-miR-34-5p miRNA MIMAT0000350 Lrr47 mRNA 34449 Prediction 0.1828 Lrr47 RAID03911783 dme-miR-1011-3p miRNA MIMAT0005024 Lrr47 mRNA 34449 Prediction 0.1828