DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 40388 Pros54 auaguaaagUAUACGUUGCAUUUAUGu |||| :|| |||||| caagugaaaAUAUAUAA-ACAAAUACa 2 19 89 114 [dm3:3L:21531653-21531678:+] 0.4814 124 6 -8.15 -0.1400 MIMAT0000364 dme-miR-289 40388 Pros54 ucAGCGUCCGAGGUGAAUUUA-UAAAu |:|:| || |||:| |||| |||| auUUGUAUGC-CCAUUAAAAUCAUUUg 2 25 40 65 [dm3:3L:21531604-21531629:+] 0.5122 142 0 -15.43 -0.8826 MIMAT0005502 dme-miR-985 40388 Pros54 acggGCUGGUAACCUU-GUAAAc :| ||||| || ||||| uguaUGCCCAUUAAAAUCAUUUg 2 19 43 65 [dm3:3L:21531607-21531629:+] 0.5122 126 0 -15.69 -0.8758 MIMAT0012199 dme-miR-2492 40388 Pros54 aaACUUUCG-AGAGCUGUUU-UGUa ||||| : | | ||||| ||| agUGAAAAUAUAUAAACAAAUACAc 2 22 91 115 [dm3:3L:21531655-21531679:+] 0.4814 124 0 -6.26 -0.7072 MIMAT0012201 dme-miR-2493 40388 Pros54 ugcggagcgUGUUUAUGUGUGCc ||||||||||||| aauauauaaACAAAUACACACGa 2 15 97 119 [dm3:3L:21531661-21531683:+] 0.4814 170 7 -20.18 -1.3264 MIMAT0012208 dme-miR-2497* 40388 Pros54 uuGUUGAUGUAAAACGU--UACGAAug :|:| :: ||| | |||||| ugUAGCCGUCUUUCAAAUUAUGCUUca 3 24 64 90 [dm3:3L:21531628-21531654:+] 0.4968 126 0 -8.04 -0.1145 MIMAT0012215 dme-miR-2500 40388 Pros54 gacucCAGGUGUGU-GUUUUAGg || ::| || :|||||| cauuuGUAUGCCCAUUAAAAUCa 2 18 39 61 [dm3:3L:21531603-21531625:+] 0.5122 136 6 -12.12 -0.1028 MIMAT0000319 dme-miR-263a 40388 Pros54 cacuuaaGAAGGUCAC-GGUAAUUg :|| :| || ||||||| uaaagcaUUUGUA-UGCCCAUUAAa 2 18 34 57 [dm3:3L:21531598-21531621:+] 0.5122 146 7 -10.03 -0.9519 MIMAT0000338 dme-miR-277 40388 Pros54 acagcauggucuaucaCGUAAAu |||||| aauaagcucguuuaaaGCAUUUg 2 8 22 44 [dm3:3L:21531586-21531608:+] 0.5122 120 6 -8.82 -0.1172 MIMAT0005493 dme-miR-977 40388 Pros54 aaucuGUUGCACUUAUAGAgu | |:| |||||| cgcauCUAUGAUUAUAUCUaa 3 17 3 23 [dm3:3L:21531567-21531587:+] 0.5122 124 0 -6.33 -0.1100

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rpn10 RAID01915082 dme-miR-277-3p miRNA MIMAT0000338 Rpn10 mRNA 40388 Prediction 0.1828 Rpn10 RAID02239092 dme-miR-977-3p miRNA MIMAT0005493 Rpn10 mRNA 40388 Prediction 0.1828 Rpn10 RAID03114597 dme-miR-263a-5p miRNA MIMAT0000319 Rpn10 mRNA 40388 Prediction 0.1828