DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 32796 ari-1 auAGUAAAGUAUACGUUGCAUUUAUGu | | ||:|| |: ||||||: caUAAAAUCGUAAUAUAUAUAAAUAUa 2 26 367 393 [dm3:X:18026436-18026462:-] 0.6087 137 0 -9.67 -0.5267 MIMAT0000360 dme-miR-287 32796 ari-1 caCGUUUGCUAAAAGUUGUgu |:|||: | |||||| uaGUAAAUAA---UCAACAgu 3 20 560 577 [dm3:X:18026252-18026269:-] 0.5177 127 0 -8.04 -0.1718 MIMAT0000360 dme-miR-287 32796 ari-1 cacGUUUG-CUAAAAGU-UGUGu ||||| || ||| |||| uacCAAACACAUACUCACACACu 2 19 475 497 [dm3:X:18026332-18026354:-] 0.5098 121 0 -9.96 -0.4232 MIMAT0000364 dme-miR-289 32796 ari-1 ucAGCGUCCGAGGUGAAUUUAUAAAu |||:| | :|: ||||||| | aaUCGUA--AUAUAUAUAAAUAUAUa 2 25 372 395 [dm3:X:18026434-18026457:-] 0.6087 129 0 -9.62 -0.1755 MIMAT0000364 dme-miR-289 32796 ari-1 ucagcguccgaggugaauuUAUAAAu |||||| uauauauauugaauuauauAUAUUUu 2 8 390 415 [dm3:X:18026414-18026439:-] 0.5731 120 6 -9.15 -0.1349 MIMAT0000388 dme-miR-303 32796 ari-1 uggucaAAGGACA----CUUUGGAUUu ||| ||| |||||||| gaaaucUUCAUGUUAUAAAAACCUAAu 2 18 610 636 [dm3:X:18026193-18026219:-] 0.5177 148 7 -10.85 -1.1431 MIMAT0011786 dme-miR-2280 32796 ari-1 uauaaaaUAACGGUUCGAUUCu || |:|||||||| uggcuggAUAACUAAGCUAAGc 2 16 10 31 [dm3:X:18026798-18026819:-] 0.5156 155 7 -14.40 -0.1903 MIMAT0011787 dme-miR-2280* 32796 ari-1 agucaAUCGAACCUUCAUUUAa ||| | ||||||| cagaaUAGAUAUAUAGUAAAUa 2 18 547 568 [dm3:X:18026261-18026282:-] 0.5177 145 7 -8.89 -1.2618 MIMAT0011791 dme-miR-2283 32796 ari-1 uaACAGCAUAA-GUACUAUAAAAg | |:| ||| :|| ||||||| uaUAUUGAAUUAUAU-AUAUUUUu 2 22 394 416 [dm3:X:18026413-18026435:-] 0.5731 158 7 -5.52 -1.1633 MIMAT0012198 dme-miR-2491 32796 ari-1 ucguUGACGUU--UCCGUUGUCGc |: |:|| | ||||||: auauAUAGUAAAUAAUCAACAGUu 2 19 555 578 [dm3:X:18026251-18026274:-] 0.5177 129 0 -10.55 -0.2022 MIMAT0012199 dme-miR-2492 32796 ari-1 aaacUUUCGAGAGC----UGUUUUGUa ||| || :| ||:||||| auaaAAACCUAAUGAAAAACGAAACAa 2 20 624 650 [dm3:X:18026179-18026205:-] 0.5177 130 0 -8.79 -0.1359 MIMAT0012215 dme-miR-2500 32796 ari-1 gacuccaGGUGUGUGUUUUAGg :||| ||:|||||| aaggaaaUCAC-CAUAAAAUCg 2 16 356 376 [dm3:X:18026453-18026473:-] 0.5514 141 6 -17.58 -0.1777 MIMAT0012215 dme-miR-2500 32796 ari-1 gacuccaggUG-UGUGUUUUAgg || | ||||||| uaaugaaaaACGAAACAAAAUgc 3 14 633 655 [dm3:X:18026174-18026196:-] 0.5177 128 0 -11.30 -0.2152 MIMAT0012216 dme-miR-2501 32796 ari-1 aaucgGGUCCGUGAGGUUUGAAUg :|| ::| ||||||| aauaaUCAACAGUUAAAAACUUAu 2 20 565 588 [dm3:X:18026241-18026264:-] 0.5177 143 7 -10.45 -1.1471 MIMAT0012217 dme-miR-2501* 32796 ari-1 uuucuuucaaacuaaCGUUCUCa ||||||| aagcuacacagaaacGCAAGAGa 2 9 242 264 [dm3:X:18026565-18026587:-] 0.4328 140 7 -10.39 -0.6067 MIMAT0012217 dme-miR-2501* 32796 ari-1 uuucuuucaaacuaaCGUUCUCa ||||||| uuuucuucguacuaaGCAAGAGc 2 9 413 435 [dm3:X:18026394-18026416:-] 0.4950 140 7 -10.74 -0.4860 MIMAT0000347 dme-miR-283 32796 ari-1 ucuuaauggucgacUAUAAAu |||||| auauugaauuauauAUAUUUu 2 8 395 415 [dm3:X:18026414-18026434:-] 0.5731 120 6 -5.78 -0.1362 MIMAT0000407 dme-miR-315 32796 ari-1 cgaaagacUCG-UUGUUAGUUuu ||: ||:|||||| agauauauAGUAAAUAAUCAAca 3 15 553 575 [dm3:X:18026254-18026276:-] 0.5177 133 0 -7.66 -0.2170 MIMAT0005467 dme-miR-190 32796 ari-1 guUGGUUCUUAUAGUU--UGUAU-AGa |: :| | || ||| ||||| || aaAUAGACACUACCAAACACAUACUCa 2 23 465 491 [dm3:X:18026338-18026364:-] 0.5098 121 0 -7.03 -0.7911 MIMAT0005472 dme-miR-375 32796 ari-1 auUGAAUU-CGGUUUGC-UUGUUu || ||| | ||||| ||||| aaACCUAAUGAAAAACGAAACAAa 2 21 628 651 [dm3:X:18026178-18026201:-] 0.5177 131 0 -14.14 -0.8325 MIMAT0005519 dme-miR-999 32796 ari-1 ucUGUGUCAGAAUGUCAAUUgu | |:| || |||||||| guAAAUAAUC-AACAGUUAAaa 3 21 562 582 [dm3:X:18026247-18026267:-] 0.5177 138 0 -10.31 -0.1024 MIMAT0005027 dme-miR-1014 32796 ari-1 gacGUUUACUUUUACUUAAaa :| || | | |||||| aaaUAUAU-AUAUUGAAUUau 3 19 387 406 [dm3:X:18026423-18026442:-] 0.5731 128 0 -1.88 -0.1224

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G009675 ari-1 Drosophila melanogaster 32796

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ari-1 RAID00142088 dme-miR-2c-3p miRNA MIMAT0000411 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID00494101 dme-miR-274-5p miRNA MIMAT0000332 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID00614833 dme-miR-1014-3p miRNA MIMAT0005027 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID00840352 dme-miR-999-3p miRNA MIMAT0005519 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID01251835 dme-miR-960-5p miRNA MIMAT0005474 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID01360788 dme-miR-956-3p miRNA MIMAT0005469 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID01635870 dme-mir-2a-1 miRNA MI0000117 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID02146386 dme-mir-13b-1 miRNA MI0000134 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID02534385 dme-miR-375-3p miRNA MIMAT0005472 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID02585438 dme-miR-306-5p miRNA MIMAT0000393 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID02950496 dme-miR-283-5p miRNA MIMAT0000347 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID03236451 dme-miR-33-5p miRNA MIMAT0000342 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID03254456 dme-miR-190-5p miRNA MIMAT0005467 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID03333186 dme-miR-303-5p miRNA MIMAT0000388 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID03492122 dme-miR-961-5p miRNA MIMAT0005475 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID03603699 dme-mir-2a-2 miRNA MI0000118 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID03792199 dme-miR-315-5p miRNA MIMAT0000407 ari-1 mRNA 32796 Prediction 0.1828 ari-1 RAID03975418 dme-miR-11-3p miRNA MIMAT0000116 ari-1 mRNA 32796 Prediction 0.1828