DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0011784 dme-miR-2279* 40260 Psn uuaaagugugugucuAUAAAUu |||||| uguaauccaauucuuUAUUUAa 2 8 60 81 [dm3:3L:20428209-20428230:+] 0.5745 120 6 -5.13 -0.2466 MIMAT0011784 dme-miR-2279* 40260 Psn uuaaagugugugucuAUAAAUu |||||| uguaauccaauucuuUAUUUAa 2 8 60 81 [dm3:3L:20428209-20428230:+] 0.5745 120 6 -5.13 -0.2175 MIMAT0012215 dme-miR-2500 40260 Psn gacuccAGGUGUG-UGUUUUAgg |::|: : ||||||| caauucUUUAUUUAACAAAAUgc 3 17 67 89 [dm3:3L:20428216-20428238:+] 0.5745 127 0 -8.26 -0.1274 MIMAT0000408 dme-miR-316 40260 Psn gcggucauucgccUUUUUCUGu :||||||| ---------acuuGAAAAGACa 2 10 1 13 [dm3:3L:20428150-20428162:+] 0.4112 141 7 -12.99 -0.7306 MIMAT0000408 dme-miR-316 40260 Psn gcggucauucgccUUUUUCUGu :||||||| ---------acuuGAAAAGACa 2 10 1 13 [dm3:3L:20428150-20428162:+] 0.4112 141 7 -12.99 -0.4967 MIMAT0005467 dme-miR-190 40260 Psn guUGGUUCUUAUAGUUUGU-AUAGa |:|||| |:|| ||| |||| acAUCAAG--UGUCUUACAGUAUCa 2 23 19 41 [dm3:3L:20428168-20428190:+] 0.4112 127 0 -14.35 -0.9008 MIMAT0005467 dme-miR-190 40260 Psn guUGGUUCUUAUAGUUUGU-AUAGa |:|||| |:|| ||| |||| acAUCAAG--UGUCUUACAGUAUCa 2 23 19 41 [dm3:3L:20428168-20428190:+] 0.4112 127 0 -14.35 -0.9535 MIMAT0005492 dme-miR-976 40260 Psn cguaacuacuauugAUUAGGUu ||||||| aacaaagcuuuuugUAAUCCAa 2 9 48 69 [dm3:3L:20428197-20428218:+] 0.4928 140 7 -9.37 -1.1185 MIMAT0005492 dme-miR-976 40260 Psn cguaacuacuauugAUUAGGUu ||||||| aacaaagcuuuuugUAAUCCAa 2 9 48 69 [dm3:3L:20428197-20428218:+] 0.4928 140 7 -9.37 -1.1069 MIMAT0005519 dme-miR-999 40260 Psn ucuGUGUCAGAAUGUCA-AUUGu :||||| | |:||| |||| ucuUACAGUAUCAUAGUCUAACa 2 20 29 51 [dm3:3L:20428178-20428200:+] 0.4112 135 0 -15.87 -1.0714 MIMAT0005519 dme-miR-999 40260 Psn ucUGUGUCAGAAUGUCAAUUGu |: || |: | :| ||||| uaAUCCAAUUCUUUAUUUAACa 2 21 62 83 [dm3:3L:20428211-20428232:+] 0.5745 124 0 -6.77 -0.1399 MIMAT0005519 dme-miR-999 40260 Psn ucuGUGUCAGAAUGUCA-AUUGu :||||| | |:||| |||| ucuUACAGUAUCAUAGUCUAACa 2 20 29 51 [dm3:3L:20428178-20428200:+] 0.4112 135 0 -15.87 -1.0965

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G006962 Psn Drosophila melanogaster 40260

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Psn RAID01911922 dme-miR-976-3p miRNA MIMAT0005492 Psn mRNA 40260 Prediction 0.2202 Psn RAID02559608 dme-miR-190-5p miRNA MIMAT0005467 Psn mRNA 40260 Prediction 0.1828 Psn RAID02685120 dme-miR-316-5p miRNA MIMAT0000408 Psn mRNA 40260 Prediction 0.2202 Psn RAID03240977 dme-miR-252-5p miRNA MIMAT0005516 Psn mRNA 40260 Prediction 0.1828 Psn RAID03474324 dme-miR-999-3p miRNA MIMAT0005519 Psn mRNA 40260 Prediction 0.1828