DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 44703 lolal auaguaaagUAUACGUUGCAUUUAUgu | || || |||||| cgaaacaaaAAAUACAUAAUAAAUAac 3 19 18 44 [dm3:2R:14042609-14042635:-] 0.5275 130 0 -5.67 -0.1897 MIMAT0005475 dme-miR-961 44703 lolal uaGAGUCAAUGACCACUAGUUu |||| | || ||||||| cgCUCAUUCACAUCUGAUCAAc 2 21 274 295 [dm3:2R:14042358-14042379:-] 0.5275 160 7 -11.75 -0.1403 MIMAT0005488 dme-miR-972 44703 lolal cgGAU-UUAUAAGCAUA-ACAUGu ||| || | | ||| ||||| aaCUAUAAGAAACUUAUAUGUACg 2 21 52 75 [dm3:2R:14042578-14042601:-] 0.5275 123 0 -7.60 -0.9001 MIMAT0005489 dme-miR-973 44703 lolal uuUUAGCUUCAAGUUGGUGGUUGGu ||| || |||| ||||||: auAAU-AAAUAACAACAACCAACUa 2 24 33 56 [dm3:2R:14042597-14042620:-] 0.5275 145 0 -16.57 -0.2600 MIMAT0005029 dme-miR-1016 44703 lolal gaUUCAUACCU-CU-CUCC-ACUu ||| :|| | || |||| ||| auAAGAGUGCACGAGGAGGAUGAa 2 20 148 171 [dm3:2R:14042482-14042505:-] 0.5275 121 0 -17.68 -0.5736 MIMAT0012199 dme-miR-2492 44703 lolal aaacuUUCGAGAGCUGUUUUGUa | |: | | | |||||| cuuauAUGUACGCAAGAAAACAa 2 19 64 86 [dm3:2R:14042567-14042589:-] 0.5275 122 6 -4.99 -0.1416 MIMAT0012216 dme-miR-2501 44703 lolal aaucgGGUCCGUGAGGUUUGAAUg ||| :|: ||||||| aacaaCCAACUAUAAGAAACUUAu 2 20 45 68 [dm3:2R:14042585-14042608:-] 0.5275 147 7 -12.14 -0.9643 MIMAT0012531 dme-miR-10-3p 44703 lolal uuUGGAGAGAUCUUGGCU-UAAAc || |: | |||| ||| |||| caACAUUACGAGAA-CGACAUUUg 2 22 111 133 [dm3:2R:14042520-14042542:-] 0.5275 127 0 -12.23 -0.7317 MIMAT0000395 dme-miR-9b 44703 lolal guauGUCGAUU-UUAGUG-GUUUCu || | || :| ||| ||||| acgcCAACAAAUGACCACACAAAGc 2 20 174 198 [dm3:2R:14042455-14042479:-] 0.5275 122 0 -10.49 -0.8789 MIMAT0005472 dme-miR-375 44703 lolal auugAAUUCG--GUUUGC-UUGUUu |||| | :|| || ||||| gguaUUAAACAAUAAUCGAAACAAa 2 19 2 26 [dm3:2R:14042627-14042651:-] 0.6692 121 0 -8.26 -1.2397 MIMAT0005520 dme-miR-1000 44703 lolal ugacgacacuguccUGUUAUa |||||| -----ugguauuaaACAAUAa 2 8 1 16 [dm3:2R:14042637-14042652:-] 0.6692 120 6 -5.67 -0.4718 MIMAT0005019 dme-miR-1006 44703 lolal gauacUUAUUCUUUAGCU-UAAAu | || ||:| ||| |||| acaacAUUACGAGAACGACAUUUg 2 19 110 133 [dm3:2R:14042520-14042543:-] 0.5275 126 0 -7.03 -0.7529 MIMAT0005024 dme-miR-1011 44703 lolal gacgcucGCUAAACUUGGUUAUu :|:| | || ||||| -------UGGUAUUAAACAAUAa 2 17 1 16 [dm3:2R:14042637-14042652:-] 0.6692 124 0 -6.30 -0.1017

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score lolal RAID00543152 dme-miR-1006-3p miRNA MIMAT0005019 lolal mRNA 44703 Prediction 0.1828 lolal RAID01384158 dme-miR-973-5p miRNA MIMAT0005489 lolal mRNA 44703 Prediction 0.1828 lolal RAID01862687 dme-miR-9b-5p miRNA MIMAT0000395 lolal mRNA 44703 Prediction 0.1828 lolal RAID01870777 dme-miR-1011-3p miRNA MIMAT0005024 lolal mRNA 44703 Prediction 0.1828 lolal RAID01908102 dme-miR-10-3p miRNA MIMAT0012531 lolal mRNA 44703 Prediction 0.1828 lolal RAID02339251 dme-miR-375-3p miRNA MIMAT0005472 lolal mRNA 44703 Prediction 0.1828 lolal RAID03073676 dme-miR-33-5p miRNA MIMAT0000342 lolal mRNA 44703 Prediction 0.2202 lolal RAID03089536 dme-miR-972-3p miRNA MIMAT0005488 lolal mRNA 44703 Prediction 0.1828 lolal RAID03278477 dme-miR-961-5p miRNA MIMAT0005475 lolal mRNA 44703 Prediction 0.1828 lolal RAID03530976 dme-miR-978-3p miRNA MIMAT0005494 lolal mRNA 44703 Prediction 0.1828 lolal RAID04006047 dme-miR-1000-5p miRNA MIMAT0005520 lolal mRNA 44703 Prediction 0.2202