DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000343 | dme-miR-280 | 44235 | bon | auaGUAAAGUAUACGU---UGCAUUUAUGu | | |||||||| :| |: ||||||: | cagCUUUUCAUAUAUAUUUAUAUAAAUAUa | 2 | 25 | 1163 | 1192 | [dm3:3R:16437721-16437750:+] | 0.5595 | 155 | 0 | -11.52 | -0.1062 |
MIMAT0000364 | dme-miR-289 | 44235 | bon | ucaGCGUCCGAGGUGAAUUUAUAAAu | | :| | | :|| ||||||||| | aagCAUAAGAUGUACAUAAAUAUUUc | 2 | 24 | 1126 | 1151 | [dm3:3R:16437684-16437709:+] | 0.5595 | 167 | 7 | -9.97 | -0.4422 |
MIMAT0000364 | dme-miR-289 | 44235 | bon | ucagcGUCCGAGGUGAAUUUAUAAAu | :||| ||:: |||||||| | aacuuUAGGGUCUG--GAAAUAUUUa | 2 | 22 | 357 | 380 | [dm3:3R:16436915-16436938:+] | 0.5595 | 154 | 7 | -14.17 | -0.9157 |
MIMAT0000364 | dme-miR-289 | 44235 | bon | ucagcGUCCGAGGUGAAUUUAUAAAu | || |||:: | || |||||| | agaauCA-GCUUUUCAUAUAUAUUUa | 2 | 22 | 1158 | 1182 | [dm3:3R:16437716-16437740:+] | 0.5595 | 135 | 6 | -11.45 | -0.2072 |
MIMAT0005475 | dme-miR-961 | 44235 | bon | uaGAGUCAA--UGACCAC-UAGUUu | || |||| :| | || ||||| | cuCUAAGUUUCGCAGAUGAAUCAAa | 2 | 21 | 975 | 999 | [dm3:3R:16437533-16437557:+] | 0.5595 | 123 | 0 | -9.83 | -0.5572 |
MIMAT0005491 | dme-miR-975 | 44235 | bon | uauguccuacauccUUCACAAau | ||||||| | uuuagcuaaauuuuAAGUGUUga | 3 | 10 | 494 | 516 | [dm3:3R:16437052-16437074:+] | 0.5595 | 125 | 0 | -5.74 | -0.2202 |
MIMAT0005494 | dme-miR-978 | 44235 | bon | gacgUUAAAUGCCGUGACCUGu | |||| | ||||||| | acagAAUUAA---AACUGGACa | 2 | 19 | 1327 | 1345 | [dm3:3R:16437885-16437903:+] | 0.5595 | 142 | 7 | -15.82 | -1.1419 |
MIMAT0005502 | dme-miR-985 | 44235 | bon | acgggcuGGUAACCUUGUAAac | |||| |||||| | ugaauauCCAU--AAACAUUga | 3 | 16 | 514 | 533 | [dm3:3R:16437072-16437091:+] | 0.5595 | 124 | 0 | -9.08 | -0.1954 |
MIMAT0005509 | dme-miR-991 | 44235 | bon | ugaAAGGUUUGAUGUUGAAAUu | | || :|:| ||||||| | aggUGCCCGAUU--AACUUUAg | 2 | 20 | 345 | 364 | [dm3:3R:16436903-16436922:+] | 0.5595 | 148 | 7 | -12.03 | -0.2965 |
MIMAT0005510 | dme-miR-992 | 44235 | bon | gaAUCAUGGUCUUUGCA-CAUGa | | |||| :|||| |||| | ugUUGUACGUUUGACGUAGUACc | 2 | 21 | 1036 | 1058 | [dm3:3R:16437594-16437616:+] | 0.5595 | 120 | 0 | -13.38 | -0.3357 |
MIMAT0005025 | dme-miR-1012 | 44235 | bon | gaUACCCCUUUUAGA-AACUGAUu | ||| :| ||:| ||||||| | acAUGUACGAUAUUUAUUGACUAu | 2 | 22 | 807 | 830 | [dm3:3R:16437365-16437388:+] | 0.5595 | 156 | 7 | -9.53 | -0.7616 |
MIMAT0011784 | dme-miR-2279* | 44235 | bon | uuAAAGUGUGUGU-CUAUAAAUu | ||| |||:::| |||||||| | aaUUUGACAUGUACGAUAUUUAu | 2 | 21 | 801 | 823 | [dm3:3R:16437359-16437381:+] | 0.5595 | 171 | 7 | -15.74 | -0.3168 |
MIMAT0011784 | dme-miR-2279* | 44235 | bon | uuaaaguguGUGUCUAUAAAUu | ||:| ||||||| | ucagcuuuuCAUAUAUAUUUAu | 2 | 14 | 1162 | 1183 | [dm3:3R:16437720-16437741:+] | 0.5595 | 153 | 7 | -9.77 | -1.1516 |
MIMAT0011784 | dme-miR-2279* | 44235 | bon | uuAAAGUGUGUGUC--UAUAAAUu | ||| : :: ::| ||||||| | acUUUAGGGUCUGGAAAUAUUUAa | 2 | 21 | 358 | 381 | [dm3:3R:16436916-16436939:+] | 0.5595 | 143 | 7 | -4.04 | -1.0439 |
MIMAT0011790 | dme-miR-2282 | 44235 | bon | uaagaUAAAAAUCGAGUGGCUa | || ||: :||||||| | uugacAUCCUUGUUUCACCGAu | 2 | 18 | 621 | 642 | [dm3:3R:16437179-16437200:+] | 0.5595 | 153 | 7 | -15.23 | -0.4982 |
MIMAT0011791 | dme-miR-2283 | 44235 | bon | uaacagcauaaguaCUAUAAAAg | |||||||| | aaucaucuaaggucGAUAUUUUc | 2 | 10 | 1265 | 1287 | [dm3:3R:16437823-16437845:+] | 0.5595 | 145 | 7 | -10.34 | -0.3961 |
MIMAT0011791 | dme-miR-2283 | 44235 | bon | uaacagcAUAAGUA-CUAUAAAag | | ||||| |||||| | aaucagcUUUUCAUAUAUAUUUau | 3 | 17 | 1160 | 1183 | [dm3:3R:16437718-16437741:+] | 0.5595 | 135 | 0 | -4.38 | -0.1083 |
MIMAT0011791 | dme-miR-2283 | 44235 | bon | uaaCAGCAUAAGUACUA-UAAAAg | ||| | || || || ||||| | gcaGUCAU-UUGAU-AUGAUUUUa | 2 | 21 | 410 | 431 | [dm3:3R:16436968-16436989:+] | 0.5595 | 120 | 0 | -6.31 | -1.1316 |
MIMAT0011791 | dme-miR-2283 | 44235 | bon | uaacagcauaaguacuAUAAAAg | |||||| | gugaaacuauggaaauUAUUUUa | 2 | 8 | 1577 | 1599 | [dm3:3R:16438135-16438157:+] | 0.6277 | 120 | 6 | -4.65 | -0.1208 |
MIMAT0012199 | dme-miR-2492 | 44235 | bon | aaacuuucGAGAGCUGUUUUGUa | || |:| ||||||| | uagcuaucCUAUUG-CAAAACAc | 2 | 16 | 1502 | 1523 | [dm3:3R:16438060-16438081:+] | 0.6277 | 149 | 7 | -11.24 | -0.2931 |
MIMAT0012205 | dme-miR-2495* | 44235 | bon | ccgcccguaaaguuaaUCCACGGc | ||||||| | agaccuuaaaaagcagAGGUGCCc | 2 | 9 | 329 | 352 | [dm3:3R:16436887-16436910:+] | 0.5595 | 140 | 7 | -13.72 | -0.1396 |
MIMAT0012209 | dme-miR-2497 | 44235 | bon | gacguUUGUAACAUUUACAACa | ||::|| |:||||||| | aauucAAUGUU-UGAAUGUUGu | 2 | 18 | 1021 | 1041 | [dm3:3R:16437579-16437599:+] | 0.5595 | 159 | 7 | -11.14 | -0.4242 |
MIMAT0012215 | dme-miR-2500 | 44235 | bon | gacuccaGGUGUGUGUUU-UAGg | | | ||||||| ||| | uucaacgCAAGACACAAAGAUCa | 2 | 16 | 1297 | 1319 | [dm3:3R:16437855-16437877:+] | 0.5595 | 123 | 0 | -13.33 | -0.5481 |
MIMAT0012531 | dme-miR-10-3p | 44235 | bon | uuUGGAGA-GAUCUU--GGCUUAAAc | | :||| | | | :||||||| | aaAGUUCUACCAUCAUUUCGAAUUUg | 2 | 22 | 781 | 806 | [dm3:3R:16437339-16437364:+] | 0.5595 | 143 | 7 | -15.88 | -0.6803 |
MIMAT0012531 | dme-miR-10-3p | 44235 | bon | uuuggAG-AGAUCUUGGCU-UAAAc | || |||| :::||| |||| | ccaaaUCAUCUAAGGUCGAUAUUUu | 2 | 19 | 1262 | 1286 | [dm3:3R:16437820-16437844:+] | 0.5595 | 125 | 0 | -13.21 | -0.5714 |
MIMAT0000319 | dme-miR-263a | 44235 | bon | cacuUAAGAAGGUCACGGUAAUUg | || :| ::| | ||||||| | auauAUAUUAUUAUUACCAUUAAa | 2 | 21 | 743 | 766 | [dm3:3R:16437301-16437324:+] | 0.5595 | 156 | 7 | -8.35 | -1.2725 |
MIMAT0000333 | dme-miR-275 | 44235 | bon | gcgcgCGAUGAAGU-C-CAUG-GACu | |:||:| || | |||| ||| | cuucaGUUAUUACACGCGUACGCUGc | 2 | 19 | 181 | 206 | [dm3:3R:16436739-16436764:+] | 0.5595 | 120 | 0 | -22.24 | -0.1227 |
MIMAT0000347 | dme-miR-283 | 44235 | bon | ucUUAAUGG--UCGA-CUAUAAAu | ||| |:| || | ||||||| | caAAUCAUCUAAGGUCGAUAUUUu | 2 | 20 | 1263 | 1286 | [dm3:3R:16437821-16437844:+] | 0.5595 | 153 | 7 | -7.09 | -0.4833 |
MIMAT0000347 | dme-miR-283 | 44235 | bon | ucUUAAUGGUCGA--CUAUAAAu | | ||: || | ||||||| | gaAUUUGACAUGUACGAUAUUUa | 2 | 20 | 800 | 822 | [dm3:3R:16437358-16437380:+] | 0.5595 | 146 | 7 | -10.17 | -0.7287 |
MIMAT0000347 | dme-miR-283 | 44235 | bon | ucuuaauggucgacUAUAAAu | |||||| | ucagcuuuucauauAUAUUUa | 2 | 8 | 1162 | 1182 | [dm3:3R:16437720-16437740:+] | 0.5595 | 120 | 6 | -8.21 | -0.2072 |
MIMAT0000352 | dme-miR-79 | 44235 | bon | uacgaaaccauuagaUCGAAAu | |||||| | uuccgacacagaaucAGCUUUu | 2 | 8 | 1149 | 1170 | [dm3:3R:16437707-16437728:+] | 0.5595 | 120 | 6 | -8.91 | -0.1039 |
MIMAT0000407 | dme-miR-315 | 44235 | bon | cgAAAGACUCGUUGUUAGUUUu | |||| || | ||||||| | agUUUCGCAG-AUGAAUCAAAc | 2 | 21 | 980 | 1000 | [dm3:3R:16437538-16437558:+] | 0.5595 | 154 | 7 | -8.90 | -0.1913 |
MIMAT0000413 | dme-miR-iab-4-3p | 44235 | bon | caAUGCAUAUGACUUCCAUAUGGc | || |||| | ||||||| | uaUAACUAUA-AAUAUGUAUACCu | 2 | 23 | 540 | 562 | [dm3:3R:16437098-16437120:+] | 0.5595 | 148 | 7 | -9.84 | -1.0583 |
MIMAT0000413 | dme-miR-iab-4-3p | 44235 | bon | caaUG-CAUAUGACUUCCAUAUGGc | || | |||| ||||||| | aaaACAGCAUAC-AUUCGUAUACCa | 2 | 22 | 911 | 934 | [dm3:3R:16437469-16437492:+] | 0.5595 | 142 | 7 | -11.25 | -0.7710 |
MIMAT0000413 | dme-miR-iab-4-3p | 44235 | bon | caauGCAUAUGACUUCCAU-AUGGc | :||| ::| :| ||| |||| | auguUGUACGUUUGACGUAGUACCa | 2 | 21 | 1035 | 1059 | [dm3:3R:16437593-16437617:+] | 0.5595 | 124 | 0 | -12.98 | -0.4973 |
MIMAT0005472 | dme-miR-375 | 44235 | bon | auugaauucggUUUGCUUGUUu | |:|:|||||| | gaaaaacaauaAGAUGAACAAa | 2 | 12 | 708 | 729 | [dm3:3R:16437266-16437287:+] | 0.5595 | 135 | 6 | -11.91 | -0.1570 |
MIMAT0005476 | dme-miR-962 | 44235 | bon | cuGUCGUAGUUAAAGAGAUG--GAAUa | |||||| ||| | ||| |||| | aaCAGCAUACAUUCGUAUACCACUUAa | 2 | 24 | 913 | 939 | [dm3:3R:16437471-16437497:+] | 0.5595 | 123 | 0 | -15.58 | -0.9239 |
MIMAT0005476 | dme-miR-962 | 44235 | bon | cuGUCGUAGUUAA-AGAGAUGG-AAUa | :| :|| ||| |: :|||| ||| | auUAAUAUAUAUUAUUAUUACCAUUAa | 2 | 24 | 739 | 765 | [dm3:3R:16437297-16437323:+] | 0.5595 | 122 | 0 | -5.70 | -1.2555 |
MIMAT0005479 | dme-miR-932 | 44235 | bon | gacGUUACGUGAU-GCCUUAACu | |||| | :|: :||||||| | aacCAAU-CUUUGUUGGAAUUGu | 2 | 20 | 668 | 689 | [dm3:3R:16437226-16437247:+] | 0.5595 | 152 | 7 | -13.14 | -0.9986 |
MIMAT0005483 | dme-miR-1002 | 44235 | bon | agcgggAAACAUAGGUGAUGAAUu | | || || :|||||||| | acuguaUAUGAAUGUACUACUUAc | 2 | 19 | 1641 | 1664 | [dm3:3R:16438199-16438222:+] | 0.6277 | 162 | 7 | -13.33 | -0.9657 |
MIMAT0005484 | dme-miR-968 | 44235 | bon | guUGG-GAAAU-UACCU--AUGAUGAAu | ||| || || ||| | |||||||| | uaACCACUGUAUAUGAAUGUACUACUUa | 2 | 23 | 1636 | 1663 | [dm3:3R:16438194-16438221:+] | 0.6277 | 163 | 7 | -19.93 | -1.0913 |
MIMAT0005492 | dme-miR-976 | 44235 | bon | cguAACUACUAUUG-AUUAGGUu | | |: :||:: ||||||| | gccUGGGCAGUAGUGUAAUCCAa | 2 | 20 | 140 | 162 | [dm3:3R:16436698-16436720:+] | 0.5595 | 146 | 7 | -12.23 | -0.3083 |
MIMAT0005504 | dme-miR-987 | 44235 | bon | guaguuaggucugAUAAAUGAAAu | |||||||||| | uuuguuggaauugUAUUUACUUUu | 2 | 12 | 676 | 699 | [dm3:3R:16437234-16437257:+] | 0.5595 | 155 | 7 | -9.95 | -0.7083 |
MIMAT0005511 | dme-miR-929 | 44235 | bon | guuagacuGAGGCAAUCCCUc | :|:| ||||||| | uguauaccUUUCAUUAGGGAu | 2 | 14 | 554 | 574 | [dm3:3R:16437112-16437132:+] | 0.5595 | 149 | 7 | -11.26 | -0.5999 |
MIMAT0005516 | dme-miR-252 | 44235 | bon | gaggacgccgugaucAUGAAUc | |||||| | uguauaugaauguacUACUUAc | 2 | 8 | 1643 | 1664 | [dm3:3R:16438201-16438222:+] | 0.6277 | 120 | 6 | -7.24 | -0.1008 |
MIMAT0005518 | dme-miR-998 | 44235 | bon | cuCGACUUAGAGUAC-CACGAu | || || :| ||| ||||| | uaGCGGACGUUGAUGUGUGCUa | 2 | 20 | 1482 | 1503 | [dm3:3R:16438040-16438061:+] | 0.5766 | 123 | 0 | -18.35 | -0.4295 |
MIMAT0005019 | dme-miR-1006 | 44235 | bon | gauacuuauucuuuAGCUUAAAu | |||||||| | guucuaccaucauuUCGAAUUUg | 2 | 10 | 784 | 806 | [dm3:3R:16437342-16437364:+] | 0.5595 | 145 | 7 | -9.22 | -0.6766 |
MIMAT0005030 | dme-miR-1017 | 44235 | bon | ccuacucaaacccaucUCGAAAg | |||||| | uuuccgacacagaaucAGCUUUu | 2 | 8 | 1148 | 1170 | [dm3:3R:16437706-16437728:+] | 0.5595 | 120 | 6 | -5.21 | -0.1049 |