DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005488 dme-miR-972 42753 cdc16 cgGAUUUA--UAAGCA-UAACAUGu || | | | || | ||||||| guCUCAUUUGAAUCAUAAUUGUACg 2 21 236 260 [dm3:3R:19109713-19109737:+] 0.5485 146 7 -11.20 -0.6101 MIMAT0005489 dme-miR-973 42753 cdc16 uuuuagcUUCAAGUUGGUGGUUGGu || | :| :||||||: ----aaaAAAUGUA--UACCAACUu 2 19 1 19 [dm3:3R:19109478-19109496:+] 0.5485 127 0 -10.50 -0.1286 MIMAT0005502 dme-miR-985 42753 cdc16 acgGGCUGGUA-AC--CUUGUAAac ||| |||| || |||||| ucgCCG-CCAUGUGAAUAACAUUaa 3 20 192 215 [dm3:3R:19109669-19109692:+] 0.5485 131 0 -14.53 -0.1209 MIMAT0011784 dme-miR-2279* 42753 cdc16 uuaaAGUGUGUGUCUAUAAAUu | |||: :| :|||||| ugaaUAACAU-UAAGUAUUUAa 2 19 203 223 [dm3:3R:19109680-19109700:+] 0.5485 136 6 -7.86 -0.2097 MIMAT0011789 dme-miR-2281 42753 cdc16 cguuaugacGUCUAUGUCUAu || |||||||| uggccagaaCAAAUACAGAUg 2 13 90 110 [dm3:3R:19109567-19109587:+] 0.5485 152 7 -12.91 -1.0741 MIMAT0012202 dme-miR-2494* 42753 cdc16 aaggguUAGAC--CACGUGAAUg || || |||||||: acaaacAUAUGCCAUGCACUUGa 2 16 57 79 [dm3:3R:19109534-19109556:+] 0.5485 130 0 -12.12 -0.1099 MIMAT0012204 dme-miR-2495 42753 cdc16 ucaGUCG-GGUUAACUUCA-CGGu || | :|||| ||||| ||| uccCACCAUCAAUCGAAGUCGCCg 2 20 174 197 [dm3:3R:19109651-19109674:+] 0.5485 130 0 -17.89 -0.7138 MIMAT0000113 dme-miR-8 42753 cdc16 cuguagaaauggacugUCAUAAu |||||| caugugaauaacauuaAGUAUUu 2 8 199 221 [dm3:3R:19109676-19109698:+] 0.5485 120 6 -5.59 -0.1357 MIMAT0000319 dme-miR-263a 42753 cdc16 cacuuaagaaggucacgGUAAUUg |||||| cgccgccaugugaauaaCAUUAAg 2 8 193 216 [dm3:3R:19109670-19109693:+] 0.5485 120 6 -12.11 -0.1426 MIMAT0000413 dme-miR-iab-4-3p 42753 cdc16 caaugcauaugacUUCCAUAUGGc || ||||||| ---------aaaaAAUGUAUACCa 2 12 1 15 [dm3:3R:19109478-19109492:+] 0.5485 147 7 -7.93 -0.9039

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Cdc16 RAID01320907 dme-miR-263a-5p miRNA MIMAT0000319 Cdc16 mRNA 42753 Prediction 0.1828 Cdc16 RAID01486454 dme-miR-375-3p miRNA MIMAT0005472 Cdc16 mRNA 42753 Prediction 0.1828 Cdc16 RAID02227502 dme-miR-972-3p miRNA MIMAT0005488 Cdc16 mRNA 42753 Prediction 0.1828 Cdc16 RAID02382363 dme-miR-iab-4-3p miRNA MIMAT0000413 Cdc16 mRNA 42753 Prediction 0.1828 Cdc16 RAID03542393 dme-mir-iab-4 miRNA MI0000432 Cdc16 mRNA 42753 Prediction 0.1828 Cdc16 RAID03938606 dme-miR-8-3p miRNA MIMAT0000113 Cdc16 mRNA 42753 Prediction 0.1828