DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000117 dme-miR-12 42491 Cortactin uggucauggacuacAUUAUGAgu ||||||| acuaacgaaaacgaUAAUACUga 3 10 51 73 [dm3:3R:16887875-16887897:-] 0.5039 125 0 -10.38 -0.1021 MIMAT0000330 dme-miR-184* 42491 Cortactin gccccgcucucuuACUAUUcc |||||| aagucugcucuuuUGAUAAag 3 9 483 503 [dm3:3R:16887445-16887465:-] 0.5342 120 0 -4.99 -0.1436 MIMAT0000343 dme-miR-280 42491 Cortactin auaGUAAAGUAUACGUUGCAUUUAUgu :| || ||| || |||||| acaUAAUUAAUA---AAGUUAAAUAau 3 25 508 531 [dm3:3R:16887417-16887440:-] 0.5342 132 0 -4.21 -0.1326 MIMAT0000343 dme-miR-280 42491 Cortactin auAGUAAAGUAUACGUUGCAUUUAUGu || ||| ||| || |||||| gcUCUUUUGAUA---AA--GAAAUACa 2 26 489 510 [dm3:3R:16887438-16887459:-] 0.5342 122 6 -8.22 -0.4079 MIMAT0005464 dme-miR-iab-4as-3p 42491 Cortactin auuUGCAUAUGACUUACAUAGg |: | |: | ||||||| uccAUUUUUGAUAUAUGUAUCa 2 20 232 253 [dm3:3R:16887695-16887716:-] 0.5039 147 7 -9.30 -1.2725 MIMAT0005500 dme-miR-984 42491 Cortactin uuuAAGGUUGG-CAUAAAU-GGAGu | ||| || |:|||| |||| auuUCCCAUCCAUUGUUUACCCUCu 2 21 120 144 [dm3:3R:16887804-16887828:-] 0.5039 127 0 -14.80 -0.8684 MIMAT0005502 dme-miR-985 42491 Cortactin acgggcugguaaccuUGUAAAc |||||| uucuuuguauuuaacACAUUUa 2 8 270 291 [dm3:3R:16887657-16887678:-] 0.5039 120 6 -4.24 -0.3500 MIMAT0005521 dme-miR-1001 42491 Cortactin acUAGGAACCCUCAAAUGGGu |||| | |||||||| ccAUCCAU---UGUUUACCCu 2 20 125 142 [dm3:3R:16887806-16887823:-] 0.5039 147 7 -14.66 -0.5830 MIMAT0005521 dme-miR-1001 42491 Cortactin acuaggaacccUCAAAUGGgu | |||||| uuaacacauuuAUUUUACCaa 3 11 280 300 [dm3:3R:16887648-16887668:-] 0.5039 122 0 -7.06 -0.1832 MIMAT0005022 dme-miR-1009 42491 Cortactin gacuuuaCAU-UGUUAAAAACUcu ||| | |||||||| aaccgugGUAUUCCAUUUUUGAua 3 17 221 244 [dm3:3R:16887704-16887727:-] 0.5039 135 0 -6.79 -0.1006 MIMAT0011784 dme-miR-2279* 42491 Cortactin uuAAAGUGUGUG-UCUAUAAAUu |||:|||: | :|||||| caUUUUACAUUCUUUGUAUUUAa 2 21 261 283 [dm3:3R:16887665-16887687:-] 0.5039 143 6 -11.97 -0.1788 MIMAT0011784 dme-miR-2279* 42491 Cortactin uuAAAGUGUGUGUCUA-UAAAUu ||| |:|:|:: || ||||| uuUUUGAUAUAUGUAUCAUUUAu 2 21 236 258 [dm3:3R:16887690-16887712:-] 0.5039 132 0 -6.25 -0.9415 MIMAT0011784 dme-miR-2279* 42491 Cortactin uuaaaguGUGUGUCUAUAAAUu || |: :|||||| acaaaauCAAAU-UGUAUUUAc 2 16 28 48 [dm3:3R:16887900-16887920:-] 0.5039 125 6 -3.62 -0.1509 MIMAT0011791 dme-miR-2283 42491 Cortactin uaACAGCAUAAGUACUAUAAAAg | || ||| | ||||||| uaUCUCUCAUU--UCAUAUUUUa 2 22 325 345 [dm3:3R:16887603-16887623:-] 0.5093 150 7 -4.25 -1.0204 MIMAT0011791 dme-miR-2283 42491 Cortactin uaacagcauaaguacuAUAAAAg |||||| uuguauuuaacacauuUAUUUUa 2 8 274 296 [dm3:3R:16887652-16887674:-] 0.5039 120 6 -7.14 -0.1027 MIMAT0012202 dme-miR-2494* 42491 Cortactin aaGGGUUAGACCA-CGUGAAUg :::: | || | ||||||| aaUUUGUUAUGCUAGCACUUAa 2 20 196 217 [dm3:3R:16887731-16887752:-] 0.5039 146 7 -11.47 -1.1668 MIMAT0012208 dme-miR-2497* 42491 Cortactin uuguUGAUGUAAAACGUUACG-AAUg |:| ||| || : |||| ||| ucucAUUUCAUAUU-UUAUGCAUUAg 2 22 329 353 [dm3:3R:16887595-16887619:-] 0.5093 123 0 -6.57 -1.1942 MIMAT0012209 dme-miR-2497 42491 Cortactin gacgUUUG-UAACAUUUACAACa |:|| : | | ||||||| uuaaAGACGGAUCU-AAUGUUGa 2 19 444 465 [dm3:3R:16887483-16887504:-] 0.5342 143 7 -12.04 -0.8530 MIMAT0012215 dme-miR-2500 42491 Cortactin gaCUCCAGGUG-UG---UGUUUUAGg || |:||| |: |||||||| uuGAAAUUCACGAUAGAACAAAAUCa 2 21 11 36 [dm3:3R:16887912-16887937:-] 0.4101 150 7 -19.02 -1.2691 MIMAT0000332 dme-miR-274 42491 Cortactin uaauggGCAAUCACAGCCAGUGUUUu :|||: | | |||||||| aucuaaUGUUGAAGACAGUCACAAAc 2 21 454 479 [dm3:3R:16887469-16887494:-] 0.5342 160 7 -12.99 -0.5193 MIMAT0000338 dme-miR-277 42491 Cortactin acaGCAUGGUCUAUCACGUAAAu :|||:|| || ||||||| auaUGUAUCAUUUAUUGCAUUUu 2 21 244 266 [dm3:3R:16887682-16887704:-] 0.5039 168 7 -16.63 -1.2158 MIMAT0000338 dme-miR-277 42491 Cortactin acAGCAUGGUCU--AUCACGUAAau || | :|| | | |||||| ucUCAUUUCAUAUUUUAUGCAUUag 3 22 329 353 [dm3:3R:16887595-16887619:-] 0.5093 128 0 -5.33 -0.1684 MIMAT0000346 dme-miR-282 42491 Cortactin ugUCUGUUUCG-GAUCAUCUCCGAUCUAa | |: | |: | | | |||||||| ccAAAUUAUGUGCAACGAAUGGCUAGAUa 2 27 152 180 [dm3:3R:16887768-16887796:-] 0.5039 149 7 -13.45 -1.0208 MIMAT0000347 dme-miR-283 42491 Cortactin ucuuaaUGGUCG--ACUAUAAAu |::||: |||||||| uuaugcAUUAGUUAUGAUAUUUg 2 16 343 365 [dm3:3R:16887583-16887605:-] 0.5093 150 7 -11.78 -1.0024 MIMAT0000347 dme-miR-283 42491 Cortactin ucUUAAUGGUCGA-CUAUAAau || | ::||| |||||| gcAACGAAUGGCUAGAUAUUga 3 20 163 184 [dm3:3R:16887764-16887785:-] 0.5039 134 0 -7.79 -0.1699 MIMAT0000362 dme-miR-263b 42491 Cortactin cacuuaagagggucACGGUUc |||||| uuaccaagaaaauaUGCCAAg 2 8 294 314 [dm3:3R:16887634-16887654:-] 0.5039 120 6 -12.92 -0.1580 MIMAT0000407 dme-miR-315 42491 Cortactin cgaaagaCUCGUUGUUAGUUUu || ||| ||||||| cacgauaGAACAA-AAUCAAAu 2 16 19 39 [dm3:3R:16887909-16887929:-] 0.5039 153 7 -7.51 -1.0525 MIMAT0005472 dme-miR-375 42491 Cortactin auugaauucgguuugCUUGUUu |||||| uugaaauucacgauaGAACAAa 2 8 11 32 [dm3:3R:16887916-16887937:-] 0.4101 120 6 -9.00 -0.1835 MIMAT0005474 dme-miR-960 42491 Cortactin cgaUACGUUAGACCUUAUGAgu | | || | |||||| cuaACGAAAACGAUAAUACUga 3 20 52 73 [dm3:3R:16887875-16887896:-] 0.5039 127 0 -6.59 -0.1000 MIMAT0005493 dme-miR-977 42491 Cortactin aaUCUGUUGCACUUAUAGAGu || :| : | :||||||| caAGCUAUUUUAGAUAUCUCu 2 20 311 331 [dm3:3R:16887617-16887637:-] 0.4942 151 7 -8.18 -0.8238 MIMAT0005519 dme-miR-999 42491 Cortactin ucUGUGUCAG-AAUGUCAAUUgu |||:| |: || |||||| auACAUAAUUAAUAAAGUUAAau 3 21 506 528 [dm3:3R:16887420-16887442:-] 0.5342 139 0 -8.24 -0.2178

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Cortactin RAID00297014 dme-miR-375-3p miRNA MIMAT0005472 Cortactin mRNA 42491 Prediction 0.2381 Cortactin RAID00517306 dme-miR-277-3p miRNA MIMAT0000338 Cortactin mRNA 42491 Prediction 0.2202 Cortactin RAID00748993 dme-miR-955-5p miRNA MIMAT0005466 Cortactin mRNA 42491 Prediction 0.1828 Cortactin RAID00751716 dme-miR-981-3p miRNA MIMAT0005497 Cortactin mRNA 42491 Prediction 0.2202 Cortactin RAID00787640 dme-miR-977-3p miRNA MIMAT0005493 Cortactin mRNA 42491 Prediction 0.2202 Cortactin RAID00939017 dme-miR-283-5p miRNA MIMAT0000347 Cortactin mRNA 42491 Prediction 0.2202 Cortactin RAID01001634 dme-miR-263b-5p miRNA MIMAT0000362 Cortactin mRNA 42491 Prediction 0.1828 Cortactin RAID01820350 dme-miR-960-5p miRNA MIMAT0005474 Cortactin mRNA 42491 Prediction 0.1828 Cortactin RAID01913173 dme-miR-999-3p miRNA MIMAT0005519 Cortactin mRNA 42491 Prediction 0.1828 Cortactin RAID01930107 dme-miR-985-3p miRNA MIMAT0005502 Cortactin mRNA 42491 Prediction 0.1828 Cortactin RAID02043287 dme-miR-315-5p miRNA MIMAT0000407 Cortactin mRNA 42491 Prediction 0.2381 Cortactin RAID02433488 dme-miR-282-5p miRNA MIMAT0000346 Cortactin mRNA 42491 Prediction 0.1828 Cortactin RAID02921354 dme-miR-274-5p miRNA MIMAT0000332 Cortactin mRNA 42491 Prediction 0.2381 Cortactin RAID03325400 dme-miR-1001-5p miRNA MIMAT0005521 Cortactin mRNA 42491 Prediction 0.1828