DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 39217 tna auaguaaaguauacguugcaUUUAUGu |||||| ccaacagcagcaacaaguaaAAAUACa 2 8 152 178 [dm3:3L:10867719-10867745:+] 0.5292 120 6 -12.18 -0.2236 MIMAT0005488 dme-miR-972 39217 tna cgGAUUUAUAAGCA--UAACAUGu | :|||| | | ||||||: ggCAGAAUA-CCAUAAAUUGUAUa 2 21 50 72 [dm3:3L:10867617-10867639:+] 0.5271 129 0 -9.08 -0.2146 MIMAT0005499 dme-miR-983 39217 tna aguaaucaagcuuugCAUAAUa |||||| cauaaauuguauauaGUAUUAu 2 8 60 81 [dm3:3L:10867627-10867648:+] 0.5271 120 6 -6.12 -0.2795 MIMAT0005502 dme-miR-985 39217 tna acgggcugguaaccUUGUAAAc ||||||| cgcguacuucaaccAACAUUUu 2 9 114 135 [dm3:3L:10867681-10867702:+] 0.5271 140 7 -7.72 -0.3052 MIMAT0011787 dme-miR-2280* 39217 tna agucaaucgaaccUUCAUUUaa ||||||| caacagcagcaacAAGUAAAaa 3 10 153 174 [dm3:3L:10867720-10867741:+] 0.5292 125 0 -9.80 -0.1605 MIMAT0012198 dme-miR-2491 39217 tna ucguugacGUUUCCGUUGUCGc |||| ||||||| uccucacaCAAA-CCAACAGCa 2 15 140 160 [dm3:3L:10867707-10867727:+] 0.5271 148 7 -11.88 -1.0387 MIMAT0012199 dme-miR-2492 39217 tna aaacuuucgagagcugUUUUGUa |||||| aaauacacaaaaaaaaAAAACAa 2 8 172 194 [dm3:3L:10867739-10867761:+] 0.5313 120 6 -2.87 -0.8758 MIMAT0012203 dme-miR-2494 39217 tna gaacauUCACCUGUAAUGACCCUu || ||:|: :|||||| aaaggcAG-GGGCGAAGCUGGGAg 2 19 8 30 [dm3:3L:10867575-10867597:+] 0.5271 136 6 -23.38 -0.1059 MIMAT0000113 dme-miR-8 39217 tna cuguagaAAUGGACUGUCAUAAu ||:: | |:|||||| ccauaaaUUGUAU-AUAGUAUUa 2 17 59 80 [dm3:3L:10867626-10867647:+] 0.5271 134 6 -10.23 -0.4962 MIMAT0000332 dme-miR-274 39217 tna uaaugggcaaucacagccaGUGUUUu |||||| gcagcaacaaguaaaaauaCACAAAa 2 8 158 183 [dm3:3L:10867725-10867750:+] 0.5292 120 6 -12.21 -0.3946

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score tna RAID00071907 dme-miR-8-3p miRNA MIMAT0000113 tna mRNA 39217 Prediction 0.2455 tna RAID00362954 dme-bantam-3p miRNA MIMAT0000365 tna mRNA 39217 Prediction 0.1828 tna RAID00407532 dme-miR-283-5p miRNA MIMAT0000347 tna mRNA 39217 Prediction 0.1828 tna RAID00873377 dme-miR-315-5p miRNA MIMAT0000407 tna mRNA 39217 Prediction 0.2202 tna RAID00889342 dme-miR-124-3p miRNA MIMAT0000351 tna mRNA 39217 Prediction 0.1828 tna RAID00974817 dme-miR-277-3p miRNA MIMAT0000338 tna mRNA 39217 Prediction 0.2202 tna RAID01018334 dme-miR-966-5p miRNA MIMAT0005481 tna mRNA 39217 Prediction 0.1828 tna RAID01052878 dme-miR-992-3p miRNA MIMAT0005510 tna mRNA 39217 Prediction 0.1828 tna RAID01136099 dme-miR-985-3p miRNA MIMAT0005502 tna mRNA 39217 Prediction 0.1828 tna RAID01244532 dme-miR-999-3p miRNA MIMAT0005519 tna mRNA 39217 Prediction 0.2202 tna RAID01291607 dme-miR-314-3p miRNA MIMAT0000406 tna mRNA 39217 Prediction 0.1828 tna RAID01314290 dme-miR-10-3p miRNA MIMAT0012531 tna mRNA 39217 Prediction 0.1828 tna RAID01567571 dme-miR-133-3p miRNA MIMAT0000340 tna mRNA 39217 Prediction 0.2202 tna RAID02124421 dme-miR-iab-4-3p miRNA MIMAT0000413 tna mRNA 39217 Prediction 0.1828 tna RAID02477088 dme-miR-932-5p miRNA MIMAT0005479 tna mRNA 39217 Prediction 0.1828 tna RAID03023363 dme-mir-iab-4 miRNA MI0000432 tna mRNA 39217 Prediction 0.1828 tna RAID03660570 dme-miR-274-5p miRNA MIMAT0000332 tna mRNA 39217 Prediction 0.1828 tna RAID03845649 dme-miR-1014-3p miRNA MIMAT0005027 tna mRNA 39217 Prediction 0.2202 tna RAID03862403 dme-miR-1006-3p miRNA MIMAT0005019 tna mRNA 39217 Prediction 0.1828