DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0011784 dme-miR-2279* 42793 CG10254 uuaaagugugugucuAUAAAUu |||||| auaaacuagcaauuuUAUUUAu 2 8 492 513 [dm3:3R:19514738-19514759:-] 0.5592 120 6 -3.47 -0.1026 MIMAT0012199 dme-miR-2492 42793 CG10254 aaacuuucgagagcugUUUUGUa |||||| uugguuauuaguuuaaAAAACAa 2 8 205 227 [dm3:3R:19515024-19515046:-] 0.5326 120 6 -6.53 -0.1892 MIMAT0012210 dme-miR-2498* 42793 CG10254 guuuuuauUCGUAUUGUCGGAAAu :||| :||||||||| guauugcuGGCA-GACAGCCUUUu 2 17 157 179 [dm3:3R:19515072-19515094:-] 0.5848 158 7 -18.39 -0.6045 MIMAT0012531 dme-miR-10-3p 42793 CG10254 uuuGGAGAGAUCUU--GGCUUAAAc ||| ||| ||| :||||||| gccCCUAUCUCGAAUCUCGAAUUUc 2 21 123 147 [dm3:3R:19515104-19515128:-] 0.5848 167 7 -15.53 -0.6253 MIMAT0000406 dme-miR-314 42793 CG10254 ggcuugaauaaccGAGCUUAu ||||||| uuauagccccuauCUCGAAUc 2 9 118 138 [dm3:3R:19515113-19515133:-] 0.5848 140 7 -9.02 -0.7114 MIMAT0000406 dme-miR-314 42793 CG10254 ggcuugaauaaccGAGCUUAu ||||||| cccuaucucgaauCUCGAAUu 2 9 125 145 [dm3:3R:19515106-19515126:-] 0.5848 140 7 -13.27 -1.0170 MIMAT0005469 dme-miR-956 42793 CG10254 uuaccuaaucucaccAGAGCUUu ||||||| guuuuauagccccuaUCUCGAAu 2 9 115 137 [dm3:3R:19515114-19515136:-] 0.5848 140 7 -9.76 -0.7467 MIMAT0005469 dme-miR-956 42793 CG10254 uuaccuaaucucaccAGAGCUUu ||||||| agccccuaucucgaaUCUCGAAu 2 9 122 144 [dm3:3R:19515107-19515129:-] 0.5848 140 7 -9.25 -0.9855 MIMAT0005471 dme-miR-958 42793 CG10254 uuucaucuuaucuuCUUAGAGu ||||||| auagccccuaucucGAAUCUCg 2 9 120 141 [dm3:3R:19515110-19515131:-] 0.5848 140 7 -9.96 -0.5992 MIMAT0005504 dme-miR-987 42793 CG10254 guaGUUA-GGUCUGAU--AAAUGAAAu :||| :||| | | |||||||| augUAAUGUCAG-CGAGUUUUACUUUa 2 22 290 315 [dm3:3R:19514936-19514961:-] 0.4804 153 7 -13.46 -0.8942 MIMAT0005504 dme-miR-987 42793 CG10254 guaGUUAG-GUCUGAUAAAUGAAAu |:||: : |::|| ||| ||| cuaCGAUUAUUGGUUA-UUAGUUUa 2 22 196 219 [dm3:3R:19515032-19515055:-] 0.5848 122 0 -10.55 -0.1181 MIMAT0005519 dme-miR-999 42793 CG10254 ucUGUGUCAGAAUGUCAAUUgu | |||| ||| :|||||| gcAGACAGCCUUUUAGUUAAac 3 21 166 187 [dm3:3R:19515064-19515085:-] 0.5848 152 0 -14.66 -0.1073 MIMAT0005019 dme-miR-1006 42793 CG10254 gauacuuauuCUU-UAGCUUAAAu ||| |||||||| ccccuaucucGAAUCUCGAAUUUc 2 14 124 147 [dm3:3R:19515104-19515127:-] 0.5848 148 7 -9.38 -0.6364

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG10254 RAID00106857 dme-miR-956-3p miRNA MIMAT0005469 CG10254 mRNA 42793 Prediction 0.2202 CG10254 RAID00257637 dme-miR-987-5p miRNA MIMAT0005504 CG10254 mRNA 42793 Prediction 0.2202 CG10254 RAID01540455 dme-miR-314-3p miRNA MIMAT0000406 CG10254 mRNA 42793 Prediction 0.2381 CG10254 RAID01878086 dme-miR-958-3p miRNA MIMAT0005471 CG10254 mRNA 42793 Prediction 0.2202 CG10254 RAID02446547 dme-miR-10-3p miRNA MIMAT0012531 CG10254 mRNA 42793 Prediction 0.1828 CG10254 RAID02969212 dme-miR-1006-3p miRNA MIMAT0005019 CG10254 mRNA 42793 Prediction 0.2202 CG10254 RAID03082950 dme-miR-1-3p miRNA MIMAT0000105 CG10254 mRNA 42793 Prediction 0.1828 CG10254 RAID03192062 dme-let-7-5p miRNA MIMAT0000396 CG10254 mRNA 42793 Prediction 0.1828 CG10254 RAID03999634 dme-miR-999-3p miRNA MIMAT0005519 CG10254 mRNA 42793 Prediction 0.1828